Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe14g00541 ATGGTTTCTGGCGAAGCTCGTTGGTTTTTGATTGTGCTGTTTGTGCTGGGATGGGCAGCACCATCAACAACAGCAAATCCAGAGGGTCAAGTTCTAATCAAGTTCAAGAGCTTTCTGTCTAATTCAACTGCTTTCAGCAATTGGGACGAGTCTATCGATGTATGCAACGGAGATAAACAACACTGGTTTGGTGTGACTTGCAAGAACAATATCTTCTATGGATTGAAGCTGGAGAATTTGATGTTAACAGGTGTGATCGACATTGACACGCTCCTTGGCTTGCCTAGTTTGAGGAGTTTGAGCTTTATGAATAATAGTTTTTCTGGTCCATTGCCAAATGTGAAGAAACTTGGTGCTCTGAAAGCTCTGTATTTGTCATACAACAATTTCTCTGGTGAAATTCAGGAGGATGCCTTTGAAGGAATGAACTCTTTGAAGAAAGTCTACTTGGCCGAAAACAAATTTTCTGGGAAAATTCCAAGCTCTCTTGCTGATTTGCCTGTTCTTCAGGAGTTGAGCCTCGAAGGAAACCAATTTTGGGGAGAAATACCTGATTTTCCGCCAAGAACTTGGACTTTATTAGATCTGTCAAACAATGATTTGGAGGGTTCAATTCCATCTAGCTTGAAGAATTCCAATTCAAGCTCCTTTTTGGGCAACAGAGATTTGTGTGGAACGCCTCTATCCCCATGCAAGTCACGCAAAAAATGGTACATTTTGGCCGGAGTTGTTGCCGGTGTCTGTGTTGTCGGAATAATCATATTTTTTGTGATTTATCGATCTAGATTGGCTAAATCGAAACACTCACAAGGCCACAAGAAATTCAGCACCGTCACAATGGGGAAGAATGTTGGTCCTTCTCCTTATCCCCATGACACCTTCAAAAAGAGTGAAAATGGAGTACTGCAGTTTGTGAGAAACGATAGAGAGAAATTCGGATTGGAAGATCTACTCAGTGCCTCCGCCGAGATTCTGGGGTGCGGAAGCTTTGGTTCTTCCTACAAGGCTGTTGTTTCCTGTGGGCCGGCAGTTGTCGTGAAGAGATTCCGGCAAATGAGTAATGTTGGAAGAGAAGAGTTCTATGAACATATGAGACGATTGGGAAGGTTGTCCCACCCTAATCTGCTTCCTCTTATCGCCTTCTACTATAAAAAAGAAGACAAGCTTTTAGTCTCCGACTACGTCGAAAATGGCAGCCTGGCCAGCCATCTCCACGCTAGGCCTGCTCCTGGGCAGGCAGGACTTGACTGGGCAACCCGCTTGAAGATCATAAAAGGAGTAGCAAGAGGCTTAGCTCATCTGCACAAGGAGCTCCCAGATCTAGCCATTCCCCATGGCCATCTCAAGTCTTCGAATGTGCTTCTAAACCACAATTACGAGCCCATCTTGACCGACTACGCACTCGTCCCTCTCGTCAACAAGCAGCACGCCCGCAGTTTCATGGTGGCCTACAAGTCCCCAGATTACACAGCCCAACACGACAGAACCTCGAAAAAGACAGACGTATGGAGCCTCGGAATCCTGATTCTGGAGCTCTTGACCGGGAAGTTCCCTGCAAATTATCTCCGTCAAGGCAAAGGAGGCGAAAACTCAGATTTAGCGACATGGGTGAACGCTGTTGTGAGAGAAGAGTGGACTGGGGAGGTTTTCGACAGTGAAATGAAGGTGGGTTCGAAGAATGGAGACGGTGATATGTTGAAGCTTTTGAAGATCGGAATGAGCTGCTGTGAGTGGAAAATGGAGGAGAGGATGGAGTTAACGGTGGCTGTGGATAAGATTGAGGAACTGAAGGAAGGAGGAGACAGTGAAGAGGACTATTATTCTTCGTATTATAGTGAAGGTGATCATTCGAAAGGAACGACTGAGGATGAGTTCTCTTTTCTGGGTTGA 1890 45.5 MVSGEARWFLIVLFVLGWAAPSTTANPEGQVLIKFKSFLSNSTAFSNWDESIDVCNGDKQHWFGVTCKNNIFYGLKLENLMLTGVIDIDTLLGLPSLRSLSFMNNSFSGPLPNVKKLGALKALYLSYNNFSGEIQEDAFEGMNSLKKVYLAENKFSGKIPSSLADLPVLQELSLEGNQFWGEIPDFPPRTWTLLDLSNNDLEGSIPSSLKNSNSSSFLGNRDLCGTPLSPCKSRKKWYILAGVVAGVCVVGIIIFFVIYRSRLAKSKHSQGHKKFSTVTMGKNVGPSPYPHDTFKKSENGVLQFVRNDREKFGLEDLLSASAEILGCGSFGSSYKAVVSCGPAVVVKRFRQMSNVGREEFYEHMRRLGRLSHPNLLPLIAFYYKKEDKLLVSDYVENGSLASHLHARPAPGQAGLDWATRLKIIKGVARGLAHLHKELPDLAIPHGHLKSSNVLLNHNYEPILTDYALVPLVNKQHARSFMVAYKSPDYTAQHDRTSKKTDVWSLGILILELLTGKFPANYLRQGKGGENSDLATWVNAVVREEWTGEVFDSEMKVGSKNGDGDMLKLLKIGMSCCEWKMEERMELTVAVDKIEELKEGGDSEEDYYSSYYSEGDHSKGTTEDEFSFLG 629
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 4701524 4704125 + Bpe007191.2 Bpe14g00541 114850

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe14g00541 629 SUPERFAMILY L domain-like 26 217 - -
Bpe14g00541 629 Gene3D Ribonuclease Inhibitor 25 189 IPR032675 -
Bpe14g00541 629 Pfam Leucine rich repeat 120 179 IPR001611 GO:0005515
Bpe14g00541 629 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 10 606 - -
Bpe14g00541 629 Pfam Leucine rich repeat N-terminal domain 25 67 IPR013210 -
Bpe14g00541 629 MobiDBLite consensus disorder prediction 599 629 - -
Bpe14g00541 629 Gene3D Phosphorylase Kinase; domain 1 290 394 - -
Bpe14g00541 629 Gene3D Ribonuclease Inhibitor 193 231 IPR032675 -
Bpe14g00541 629 ProSiteProfiles Protein kinase domain profile. 319 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe14g00541 629 SUPERFAMILY Protein kinase-like (PK-like) 323 591 IPR011009 -
Bpe14g00541 629 Pfam Protein kinase domain 322 521 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe14g00541 629 Gene3D Transferase(Phosphotransferase) domain 1 395 614 - -
Bpe14g00541 629 PANTHER POLLEN RECEPTOR-LIKE KINASE 5 10 606 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe14g00541 - - - jre:109009424 739.184
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g02172 Bpe-Chr2:22992648 Bpe14g00541 Bpe-Chr14:4701524 2.28E-147 dispersed
Bpe03g00708 Bpe-Chr3:27231889 Bpe14g00541 Bpe-Chr14:4701524 7.94E-124 dispersed
Bpe08g00723 Bpe-Chr8:8690576 Bpe14g00541 Bpe-Chr14:4701524 0 dispersed
Bpe14g00541 Bpe-Chr14:4701524 Bpe13g01075 Bpe-Chr13:16329234 2.05E-104 dispersed
Bpe14g00541 Bpe-Chr14:4701524 Bpe09g00065 Bpe-Chr9:451682 0 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g244 . . . . . . . . . . . . . . . . . Bhi04g01111 . . . . . Lcy13g1363 . . . . . . . . . . Cone20ag0623 . . . Cme03g01708 . . . . Bpe14g00541 . . . . . . . . . . . . . . . . . . . Cla08g01254 . . . . . . Lsi08g01116 Csa02g02307 . Cme04g00319
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0012527 0 1 0 0 1 1 2 1 1 1 1 1 2 1 0 2 1 0 2 1 1 1 1 1 0 1 0 0 1 0 25
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63718 PF00069 Pkinase 4.50E-29 CL0016 Bpe PK
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe14g00541 Bpe_Chr14 FPKM 0.505187 0.363243 1.486132 1.34695 5.538585 5.767963 6.702424 2.059742 2.381367 2.672261