Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe14g00568 ATGGGTTCTTGCAAAGAACAAGAAGAAACGAAAGCGAATAGTTGGTGGGTGAATGGCCCGATAATTGTTGGTGCTGGACCATCCGGGCTGGCTGCTTCCGCTTGTCTTTCCGAGCATGGAGTTCCGTCATTGATTCTTGAAAAGAGTGACTGTATAGTTTCTTTATGGCAACACAGAACGTACGATCGCCTAAAGCTTCATCTTCCCAAGCATTTCTGCGAGCTTCCATTAATGGGTTTCCCTAAAAATTTCCCCAAGTACCCGACAAAGCGCCAGTTCATCTCCTACATGGAGTCATACGCTTCGCACTTCTCAATCCACCCGAGATTCAATGAAACTGTTCACAGCGCAGAGTTTGATTCGAGAGGGTTTTGGACAGTCCGGACTCAGCAGTTGGAATACATTTCCCGGTGGCTTATCGTTGCCACCGGCGAAAATGCAGAGCTGGTAAAACCCGAAATTGCCGGGATGGAGAAGTTTCGTGGACCTGTGATTCATACCAGCATGTATAAATCTGGTTCCGATTTCGAAAACAAGAGGGTTTTGGTTGTCGGATGCGGCAATTCCGGCATGGAAGTTAGCTTGGACCTTTGCCGGCACAATGCTGTTCCCCATATAGTTGTTAGAAACACAGTACATGTCCTTCCGAGGGAAATGTTCGGTTTCTCGACGTTCGGAATCGCCATGGGACTTCTGAAATGGCTGCCTTTAAGAGTCGTCGACAAGTTTCTCCTTTTAGCAGCCAATCTCCTTCTCGGAAACACAGATCAACTAGGTCTTCGGCGGCCAAAAACGGGTCCGATCGAGCTGAAAAACGTGACCGGAAAAACCCCCGTTCTCGACGTAGGAGCCCTCTCACAGATAAAAGCCGGGAAAATAATGGTCATGGAAGGTCTGAAGGAAATAACCAGAAATGGAGCTAAATTTCTGGATGGGCAGGAGCGAGAATTCGACTCCATAATCCTCGCTACAGGCTACAGAAGCAACGTCCCCAGTTGGCTCAAGACACAGTTAATTAAAGCAAGAGAGCAGCAGCAGCAGCAACAACAACAACAACACCCGCAGCTCCAACAACCTCAACAATCACAACATCAGCAGCAGCAGCAACAACACATGCAAATGCAGCAGCACCTGTTGCAGAGGCAGCAGCAACAACAACAGCAACAGCAACAGCAGCAGCAACAACAGCAACAGCAGCAGCAACAACAGCAACAGCAACAACAAACACAGGCCCAGCAACAGCAACGAAGAGATGGGGCTCACCTCTTAAATGGAAATTCTAATGGGCTTGTTGGAAATGATCCTCTTTTGCGACAAACCCCTGGAACTGCAAATGCTTTGGCTGCAAAGATGTATGAAGAAAGACTAAAATTGCCTCCTCAGAGAGATGCTCTGGATGATGCGACTATAAAGCAACGATACGGTGAGAGTGTGGGGCAGCTGTCAGATCCAAATCACGCTTCAGTGCTCAAGGCAACTGCAGCAAGTGGGCAGGCATCAGGTCAAGTATTACATGGGGCTGCTGGGACAATGTCTCCTCAGGTTCAAGCTAGGGGTCAGCAATTGCCAGGTTCCACTCCGGACATAAAAAGCGAGATCAATCCAGTGCTGAATCCAAGAGCAGCGGGTTCGGAGGGATCACTGATGGGTATTCCTGGATCTAACCATGGGGGCAATAATTTGACTTTGAAAGGATGGCCTCTTACGGGATTGGATCAGCTTCGTTCTGGGCTTCTTCAGCAACAAAAATCTTTTATACAATCTCCTCAGCCATTTCACCAGATCCAGATGTTGGCTCCACAACAGCAACAGTTCATGCTTGCACAGCAAAATTTAACTTCCCCATCTGCAAGTGATGAAAGCAGAAGATTGAGAATGCTAGTGAACAGTAGGAATATGGGACTTGCAAAGGATGGGCTGTCAAATTCTGTTGGTGATGTTGTTGCCAATGTTGGCTCACCGCTCCAACCTGGTGGCCCCCTTTTGCCTCGGGGAGATACTGATGTTCTCTATAAGTTAAAAATGGCTCAAATACAACAACAACAGCAGCAACAGCAGAGCAATAATCCTCAGCAGCAGCAACTCCAACAACAACATGTTCTTTCTGGTCAGCAATCGCAAAGTTCGAGTTTCAATATCCACCAGCAAGATAATAAAATGGGTGGTGCTGGCAGTGTAAACATGGATGGAAACATGTCAAACTCCTTTCGAGGAACTGATCAGGTTTCAAAAAACCAGACTGTGAGAAAAAGAAAGCAGCCAGTGTCATCTTCAGGTCCTGCCAATAGCTCAGGAACAGCAAACACTGCTGGCCCTTCCCCAAGTTCGGCACCATCAACACCTTCAACACATACCCCTGGAGATGTGATCTCCATGCCATTGCCTCACAGTGGTGGTTCTTCCAAGCCGTTGATCTTGGGTGCTGATGGTTCCGGCACTTTTACATCACCATCAAACCAATTGTGGGATGATAAAGATCTTGAATTGCAGGCTGACATGGATCGGTTTGTAGAAGATGGATCTCTTGATGATAATGTTGAGTCTTTTTTATCCCATGACGATTCAGATCCTAGAGATCCAGTTGGTCGGGATGTGAGCAAAGGTTTTTCATTTATTGAAATTAATTCAGTAAGAGCCAGCTCTAGTAAAGTTTCCTGTTGCCACTTTTCGTCTGATGGAAAATTGCTTGCTAGTGGTGGTCATGACAAAAAGGCAGTATTGTGGCACACAGAAAATTTTAAGCCAAAGACCTCACTCGAAGAACATTCATCCATTATTACAGATGTTCGTTTCAGTCCGAGCATGCCTCGTCTTGCTACTTCTTCATTCGATAGAACTGTCAGGGTTTGGGATGCTGACAATCCTTGTTACTCTCTTAGGACTTTTACTGGACATTCAGCCGCGGTTATGTCTTTAGACTTCCATCCAAACAAAGATGATCTTATTTGCTCTTGTGATGGAGATGGTGAGATACGTTACTGGAGTATCAACAATGGAAACTGTGCAAAAGTTTGCAAGGGTGGCACAGGGCAGATGAGATTTCAGCCCCGTCTTGGTCGGTTTCTTGCTTCTGCTGTTGATAAAATTGTATCTATTCTAGACGTGGAGGCACAAGTCAGTCGCCATTCTTTGCAGGGACATTCGAATACAGTCCATTCAGTCTCGTGGGATCCTTCAGGCGAGTTTCTTGCCTCAGTTAGTGAGGATTCAGTCAAGGTTTGGTCGTTTGGCTCGGGATCCGAAGGAGAGTGTATTCATGAGTTAAACTGTAATGGCAATAAATTCCAATCCTGTGTTTTCCACCCTACATATCCTTCACTACTTGTTTTAAAACAGGAAGAATGTGAATACCTGTCTAACTGTGAAGAGAAGCGCTGTGATTTGCAAAAAGATATCATGGACTTGGAAGAAAAACTCAGCAATGGCTTTGAGACCAGGATTTGGTTAAATAGTTTAGACCACTCTCTAAGTCAATCTTTGGAATTAATTAATTTGGGAAAGAAGGAACTCGCCACTAAGTTGAGGAAGATAGTAGCATTGAGGAGGATGCATGATGATCTCCCAACCAAATCAGAACTTGTTCAGTATGAGCGTCGGGTTTCAGAATTGTATGCTCACGTCCAGGAAAAACTCAGACAAACGCGCAAATATTTTGCTACCTACAATGCACTTTTAGAGATCAAAGAAATGATGCTGAAGGAAACGTCATTGTTAAATTCCATTAGTTCCCAGTTTCAAGATGCATTTTCTAGCTCCTCTGGAAAAGTGAAGCTTATTGATTCCATGGAAGGGATTGTGAAAGGCCTCGAACAGAAGCGGGGAAAGGTGCAACTTGGACTTGAAGAAGAGCAGAAGGTATGCGAGGCTCTCAAAGAAAAATACGCCACTGAAATAGCCGAGCAAAGACGCTGCTATTCACTCTTGAAAGTTTTCCAGGAAGAATGTGCGAAGAACGAGAGGCTTCGGAGCAAAAGTTGCTCATAA 3984 45.48 MGSCKEQEETKANSWWVNGPIIVGAGPSGLAASACLSEHGVPSLILEKSDCIVSLWQHRTYDRLKLHLPKHFCELPLMGFPKNFPKYPTKRQFISYMESYASHFSIHPRFNETVHSAEFDSRGFWTVRTQQLEYISRWLIVATGENAELVKPEIAGMEKFRGPVIHTSMYKSGSDFENKRVLVVGCGNSGMEVSLDLCRHNAVPHIVVRNTVHVLPREMFGFSTFGIAMGLLKWLPLRVVDKFLLLAANLLLGNTDQLGLRRPKTGPIELKNVTGKTPVLDVGALSQIKAGKIMVMEGLKEITRNGAKFLDGQEREFDSIILATGYRSNVPSWLKTQLIKAREQQQQQQQQQHPQLQQPQQSQHQQQQQQHMQMQQHLLQRQQQQQQQQQQQQQQQQQQQQQQQQQQQTQAQQQQRRDGAHLLNGNSNGLVGNDPLLRQTPGTANALAAKMYEERLKLPPQRDALDDATIKQRYGESVGQLSDPNHASVLKATAASGQASGQVLHGAAGTMSPQVQARGQQLPGSTPDIKSEINPVLNPRAAGSEGSLMGIPGSNHGGNNLTLKGWPLTGLDQLRSGLLQQQKSFIQSPQPFHQIQMLAPQQQQFMLAQQNLTSPSASDESRRLRMLVNSRNMGLAKDGLSNSVGDVVANVGSPLQPGGPLLPRGDTDVLYKLKMAQIQQQQQQQQSNNPQQQQLQQQHVLSGQQSQSSSFNIHQQDNKMGGAGSVNMDGNMSNSFRGTDQVSKNQTVRKRKQPVSSSGPANSSGTANTAGPSPSSAPSTPSTHTPGDVISMPLPHSGGSSKPLILGADGSGTFTSPSNQLWDDKDLELQADMDRFVEDGSLDDNVESFLSHDDSDPRDPVGRDVSKGFSFIEINSVRASSSKVSCCHFSSDGKLLASGGHDKKAVLWHTENFKPKTSLEEHSSIITDVRFSPSMPRLATSSFDRTVRVWDADNPCYSLRTFTGHSAAVMSLDFHPNKDDLICSCDGDGEIRYWSINNGNCAKVCKGGTGQMRFQPRLGRFLASAVDKIVSILDVEAQVSRHSLQGHSNTVHSVSWDPSGEFLASVSEDSVKVWSFGSGSEGECIHELNCNGNKFQSCVFHPTYPSLLVLKQEECEYLSNCEEKRCDLQKDIMDLEEKLSNGFETRIWLNSLDHSLSQSLELINLGKKELATKLRKIVALRRMHDDLPTKSELVQYERRVSELYAHVQEKLRQTRKYFATYNALLEIKEMMLKETSLLNSISSQFQDAFSSSSGKVKLIDSMEGIVKGLEQKRGKVQLGLEEEQKVCEALKEKYATEIAEQRRCYSLLKVFQEECAKNERLRSKSCS 1327
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 4834158 4848135 - Bpe007218.5 Bpe14g00568 114877

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe14g00568 1327 PANTHER TRANSCRIPTIONAL REGULATOR OF FILAMENTOUS GROWTH FLO8 331 1120 IPR044716 GO:0003714
Bpe14g00568 1327 Gene3D - 20 393 IPR036188 -
Bpe14g00568 1327 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 962 1000 - -
Bpe14g00568 1327 MobiDBLite consensus disorder prediction 409 439 - -
Bpe14g00568 1327 Coils Coil 1280 1300 - -
Bpe14g00568 1327 PANTHER TRANSCRIPTIONAL COREPRESSOR LEUNIG-LIKE PROTEIN 331 1120 - -
Bpe14g00568 1327 CDD WD40 873 1102 - -
Bpe14g00568 1327 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 35 - -
Bpe14g00568 1327 Pfam WD domain, G-beta repeat 914 951 IPR001680 GO:0005515
Bpe14g00568 1327 Pfam WD domain, G-beta repeat 959 995 IPR001680 GO:0005515
Bpe14g00568 1327 Pfam WD domain, G-beta repeat 1042 1075 IPR001680 GO:0005515
Bpe14g00568 1327 Pfam WD domain, G-beta repeat 879 908 IPR001680 GO:0005515
Bpe14g00568 1327 SUPERFAMILY FAD/NAD(P)-binding domain 21 212 IPR036188 -
Bpe14g00568 1327 Coils Coil 372 417 - -
Bpe14g00568 1327 MobiDBLite consensus disorder prediction 681 821 - -
Bpe14g00568 1327 ProSiteProfiles Trp-Asp (WD) repeats profile. 1044 1084 IPR001680 GO:0005515
Bpe14g00568 1327 ProSiteProfiles Trp-Asp (WD) repeats profile. 919 954 IPR001680 GO:0005515
Bpe14g00568 1327 ProSiteProfiles Trp-Asp (WD) repeats profile. 877 918 IPR001680 GO:0005515
Bpe14g00568 1327 MobiDBLite consensus disorder prediction 681 787 - -
Bpe14g00568 1327 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1044 1075 - -
Bpe14g00568 1327 ProSitePatterns Trp-Asp (WD) repeats signature. 938 952 IPR019775 -
Bpe14g00568 1327 SUPERFAMILY WD40 repeat-like 872 1109 IPR036322 GO:0005515
Bpe14g00568 1327 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 919 954 - -
Bpe14g00568 1327 Gene3D - 863 1014 IPR015943 GO:0005515
Bpe14g00568 1327 ProSiteProfiles Trp-Asp (WD) repeats profile. 962 1004 IPR001680 GO:0005515
Bpe14g00568 1327 PRINTS Pyridine nucleotide disulphide reductase class-II signature 19 41 - -
Bpe14g00568 1327 PRINTS Pyridine nucleotide disulphide reductase class-II signature 176 200 - -
Bpe14g00568 1327 PRINTS Pyridine nucleotide disulphide reductase class-II signature 137 145 - -
Bpe14g00568 1327 SUPERFAMILY FAD/NAD(P)-binding domain 178 339 IPR036188 -
Bpe14g00568 1327 SMART WD40_4 870 909 IPR001680 GO:0005515
Bpe14g00568 1327 SMART WD40_4 955 995 IPR001680 GO:0005515
Bpe14g00568 1327 SMART WD40_4 912 951 IPR001680 GO:0005515
Bpe14g00568 1327 SMART WD40_4 998 1034 IPR001680 GO:0005515
Bpe14g00568 1327 SMART WD40_4 1037 1075 IPR001680 GO:0005515
Bpe14g00568 1327 Pfam Flavin-binding monooxygenase-like 22 354 IPR020946 GO:0004499|GO:0050660|GO:0050661
Bpe14g00568 1327 Gene3D - 1015 1115 IPR015943 GO:0005515
Bpe14g00568 1327 PRINTS FAD-dependent pyridine nucleotide reductase signature 180 198 - -
Bpe14g00568 1327 PRINTS FAD-dependent pyridine nucleotide reductase signature 20 39 - -
Bpe14g00568 1327 MobiDBLite consensus disorder prediction 344 375 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe14g00568 - - - pvy:116133053 1084.32
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe13g00850 Bpe-Chr13:14685127 Bpe14g00568 Bpe-Chr14:4834158 2.54E-13 dispersed
Bpe14g00568 Bpe-Chr14:4834158 Bpe01g00529 Bpe-Chr1:3419989 1.18E-148 dispersed
Bpe14g00839 Bpe-Chr14:6304743 Bpe14g00568 Bpe-Chr14:4834158 4.85E-52 dispersed
Bpe01g00505 Bpe-Chr1:3255431 Bpe14g00568 Bpe-Chr14:4834158 6.77E-165 transposed
Bpe14g00568 Bpe-Chr14:4834158 Bpe02g01231 Bpe-Chr2:15940868 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g428 . . . . . . . . . . . . . . . . . Bhi04g01021 Tan02g2683 . . . . . . . . . . . . . . . . . . . . . . Bda01g00984 . Bpe14g00568 . . . . . . . . . Car05g00599 . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003018 4 4 2 1 1 1 2 1 1 1 1 1 1 1 1 3 1 5 3 1 1 1 1 1 1 1 1 4 3 3 53
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe14g00568 Bpe_Chr14 FPKM 25.323 27.435175 30.369881 29.574945 34.747589 36.444603 37.561695 42.987747 41.395908 40.695454