Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe14g00575 ATGCAAGAGCAAGCTTCCACTTCTATCGCCGCTGTTTCTTTGCCTTCCAGCAGTGACAGGTCCTCCAGCTCTGCTCTTCATCTCGACGTCAAAGAAGGTATGGAGAGCGATGAGGAGATCAGGAGAGTTCCGGAGTTAGGAGGAGAATCAGCTGGAACTTCAGCATCCGGCAGAGTTAATGGTTCCAGGGGGGCCGGTTCTGGGCTGGTTCGAGTTGCACGGGAAGGTCAAAGAAAGAGGGGAAGAAGCCCAGCTGACAGAGAAAGTAAACGACTCAAAAGATTGTTGAGAAATAGAGTCTCCGCACAGCAAGCTAGGGAGAGGAAGAAGGCATACTTGAGTGACTTGGAAACTCGGGTCAAAGAGTTGGAGAAAAAGAACTCAGAGCTAGAAGAGAGGCTCTCCACTTTACAGAACGAGAACCAGATGCTTAGACAGGTATCTCTGTTTCATTATCTTAATTTCATGAATGACATTCTAATGCTTGTTTTTATCTTGCAGATTTTGAAGAACACAACAGCTAGCAGGAAAAGTAGTAGTAACAGCAACAATGCGGAATGA 561 46.52 MQEQASTSIAAVSLPSSSDRSSSSALHLDVKEGMESDEEIRRVPELGGESAGTSASGRVNGSRGAGSGLVRVAREGQRKRGRSPADRESKRLKRLLRNRVSAQQARERKKAYLSDLETRVKELEKKNSELEERLSTLQNENQMLRQVSLFHYLNFMNDILMLVFILQILKNTTASRKSSSNSNNAE 186
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 4883046 4883979 + Bpe007224.1 Bpe14g00575 114884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe14g00575 186 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 1 178 IPR044280 GO:0000981|GO:0045944
Bpe14g00575 186 MobiDBLite consensus disorder prediction 30 45 - -
Bpe14g00575 186 Coils Coil 85 147 - -
Bpe14g00575 186 PRINTS cAMP response element binding (CREB) protein signature 11 26 - -
Bpe14g00575 186 PRINTS cAMP response element binding (CREB) protein signature 103 123 - -
Bpe14g00575 186 PRINTS cAMP response element binding (CREB) protein signature 123 140 - -
Bpe14g00575 186 PRINTS cAMP response element binding (CREB) protein signature 85 101 - -
Bpe14g00575 186 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 1 178 - -
Bpe14g00575 186 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 93 108 IPR004827 GO:0003700|GO:0006355
Bpe14g00575 186 MobiDBLite consensus disorder prediction 1 24 - -
Bpe14g00575 186 MobiDBLite consensus disorder prediction 73 96 - -
Bpe14g00575 186 MobiDBLite consensus disorder prediction 1 96 - -
Bpe14g00575 186 CDD bZIP_HY5-like 91 142 - -
Bpe14g00575 186 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 88 146 IPR004827 GO:0003700|GO:0006355
Bpe14g00575 186 Gene3D Single helix bin 109 147 - -
Bpe14g00575 186 Pfam bZIP transcription factor 87 146 IPR004827 GO:0003700|GO:0006355
Bpe14g00575 186 SUPERFAMILY Leucine zipper domain 90 146 IPR046347 GO:0003700|GO:0006355
Bpe14g00575 186 SMART brlzneu 86 150 IPR004827 GO:0003700|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe02g01240 Bpe14g00575 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g00532 Bpe-Chr4:3380030 Bpe14g00575 Bpe-Chr14:4883046 2.08E-08 dispersed
Bpe14g00575 Bpe-Chr14:4883046 Bpe12g00099 Bpe-Chr12:711243 3.29E-06 dispersed
Bpe14g00575 Bpe-Chr14:4883046 Bpe02g01240 Bpe-Chr2:15979796 3.49E-78 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22447 PF00170 bZIP_1 1.70E-14 CL0018 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe14g00575 K16241 - csv:101218051 218.394