Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe14g00578 ATGGGGGAGACCAGGGACGCCGAGTACGAGGATGAGCTTGTCGACTACGAAGATGAGGAATACAAGGCATCCGACGCTGTTGGAGCCAAAGTTAATGGCGAAGCGGCAAAGAAGGGTTATGTCGGCATTCATAGTTCGGGATTCAGAGACTTTCTTTTGAAGCCAGAGCTTCTTCGTGCTATTGTGGACTCGGGATTTGAGCATCCTTCCGAAGGCAAACTTTCTACTCTTTTGTTACATTTTACTCACCCACGGTTCATTTCCTTCGATGGATTTTTTACTTCTTCATCAGTGCAACACGAATGTATTCCCCAAGCTATTCTAGGAATGGATGTACTCTGTCAAGCTAAATCTGGTATGGGAAAAACTGCTGTTTTTGTGTTATCCGTCTTGCAGCAAATTGACCCTGTGGCTGGTCAAGTTTCTGCCCTTGTTCTTTGTCATACAAGAGAACTAGCATACCAGATTTGCCATGAGTTCGAGAGGTTCAGTTCTTACTTGTCGGATCTCAAAGTGTCAGTATTCTATGGCGGTGTCAATATCCGAATTCACAAAGATCTACTGAAGAATGAATGCCCTCATATTGTTGTTGGAACTCCTGGAAGAATATTGGCTTTGGCGAGAGAAAAGGATCTTTCTCTTAAGAATGTTAGGCATTTTATCTTGGATGAATGTGACAAGATGCTCGAATCACTTGACATGAGGAGGGACGTGCAGGAGATTTTCAAGATGACCCCCCATGATAAGCAAGTTATGATGTTTTCTGCAACACTAAGCAAAGAAATTCGCCCGGTCTGCCATAAATTTATGCAAGATCCAATGGAAATATATGTGGATGACGAGGCAAAGTTGACCCTGCATGGTCTTGTGCAGCACTACATTAAATTGGCTGAAGCTGAGAAAAATCGCAAGTTGAATGACCTTCTCGATGCTCTGGACTTCAATCAAGTGGTCATATTCGTCAAAAGTGTGAGCAGAGCAGCTCAGTTGGACAAGTTATTAGTCGAATGTAATTTTCCCTCTATATGCATTCACTCTGGCATGTCTCAGGAAGAAAGGTTGACGCGATACAAAGGATTCAAGGAGGGACATAAGAGGATTCTTGTTGCTACAGATTTGGTTGGCCGGGGTATTGACATTGAACGTGTGAACATAGTTATCAACTATGATATGCCTGATTCTGCTGATACGTATCTACACAGGGTTGGCAGAGCTGGAAGGTTTGGTACTAAAGGGCTTGCCATTACTTTTGTTTCATCTGCTGCAGACACTGACGTTCTCAATAATGTTCAAGAAAGGTTTGCTGTGAACATAATGGAACTTCCTGAGCAGATTGATACCTCTACTTACAGTATGTGCTTATATTTATCTTTAGCTATTGTACTGCTAGAACTTTAG 1398 42.56 MGETRDAEYEDELVDYEDEEYKASDAVGAKVNGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEGKLSTLLLHFTHPRFISFDGFFTSSSVQHECIPQAILGMDVLCQAKSGMGKTAVFVLSVLQQIDPVAGQVSALVLCHTRELAYQICHEFERFSSYLSDLKVSVFYGGVNIRIHKDLLKNECPHIVVGTPGRILALAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCHKFMQDPMEIYVDDEAKLTLHGLVQHYIKLAEAEKNRKLNDLLDALDFNQVVIFVKSVSRAAQLDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADTDVLNNVQERFAVNIMELPEQIDTSTYSMCLYLSLAIVLLEL 465
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 4889532 4892998 - Bpe007227.1 Bpe14g00578 114887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe14g00578 465 SMART ultradead3 91 292 IPR014001 -
Bpe14g00578 465 Pfam DEAD/DEAH box helicase 97 262 IPR011545 GO:0003676|GO:0005524
Bpe14g00578 465 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 304 449 IPR001650 -
Bpe14g00578 465 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 141 420 IPR027417 -
Bpe14g00578 465 Gene3D - 42 284 IPR027417 -
Bpe14g00578 465 CDD SF2_C_DEAD 289 418 - -
Bpe14g00578 465 Pfam Helicase conserved C-terminal domain 302 409 IPR001650 -
Bpe14g00578 465 SMART helicmild6 328 409 IPR001650 -
Bpe14g00578 465 CDD DEADc_DDX39 45 278 - -
Bpe14g00578 465 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 27 448 - -
Bpe14g00578 465 Gene3D - 285 453 IPR027417 -
Bpe14g00578 465 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 103 276 IPR014001 -
Bpe14g00578 465 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 56-LIKE ISOFORM X1 27 448 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe02g01244 Bpe14g00578 CCT
Bpe02g00566 Bpe14g00578 CCT
Bpe02g01244 Bpe14g00578 ECH
Bpe02g00566 Bpe14g00578 ECH
Bpe04g00053 Bpe14g00578 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe14g00578 Bpe-Chr14:4889532 Bpe14g00974 Bpe-Chr14:7193163 4.25E-76 dispersed
Bpe14g00578 Bpe-Chr14:4889532 Bpe02g01244 Bpe-Chr2:15989367 0 wgd
Bpe14g00578 Bpe-Chr14:4889532 Bpe02g00566 Bpe-Chr2:3649909 0 wgd
Bpe14g00578 Bpe-Chr14:4889532 Bpe04g00053 Bpe-Chr4:464387 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe14g00578 K12812 - csv:101217346 777.319