Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe14g00580 ATGGACGAAAATTCAGGTGGCATGAATGGTTCTATTGTTTATGAGCTTGATAGACCTGAAAATACTGGTCTCAAAAAATCTTTGAATATTCTCAAGAAAGCAAAGAGTGAAGTGGATGCAGTAGAACCAGCTTCATGGGCAGATATGATTGCTGTCGCCGGTGCAGAAGCGGTTTCAATCTGTGGAGGTCCAAATATCCATGTTGGCTTAGGGAGACTAGATTCATTGAAGGATGATCCTGAAGGGAGACTTCCTCTGGAGTCTCTGGATGCTTTGGGTTTGAAGCAATGCTTTCTTAAGAAAGGATTTTCAACTCGGGAACTCGTTGCTCTATCTGGAGCCCATACTCTTGGGAGCAAGGGATTTGGAAATCCAACAGTTTTTGATAATTCATACTTTCGGATTCTTCTGGAGCAGCCGTGGAAGTCTTCAGCTGGTGGGATGACGAGCATGATCGGACTTCCTTCCGACCGTGCTCTTGCCGAGGACGAAGAATGCATGAGATGGATCAAAAACTATGCACAGAATCAGAAGACGTTCTTTGAAGATTTCAAGAATGCTTATACCAAGTTAGTGAATTCTGGTGCTGTGTGGAAAAGCCTGTGA 606 43.89 MDENSGGMNGSIVYELDRPENTGLKKSLNILKKAKSEVDAVEPASWADMIAVAGAEAVSICGGPNIHVGLGRLDSLKDDPEGRLPLESLDALGLKQCFLKKGFSTRELVALSGAHTLGSKGFGNPTVFDNSYFRILLEQPWKSSAGGMTSMIGLPSDRALAEDEECMRWIKNYAQNQKTFFEDFKNAYTKLVNSGAVWKSL 201
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 4895044 4896365 - Bpe007229.1 Bpe14g00580 114889

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe14g00580 201 Gene3D Peroxidase, domain 2 85 188 - -
Bpe14g00580 201 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 2 199 IPR044831 GO:0004601|GO:0034599
Bpe14g00580 201 PRINTS Plant ascorbate peroxidase signature 43 61 IPR002207 GO:0004601|GO:0006979|GO:0020037
Bpe14g00580 201 PRINTS Plant ascorbate peroxidase signature 83 100 IPR002207 GO:0004601|GO:0006979|GO:0020037
Bpe14g00580 201 PRINTS Plant ascorbate peroxidase signature 172 196 IPR002207 GO:0004601|GO:0006979|GO:0020037
Bpe14g00580 201 PRINTS Plant ascorbate peroxidase signature 62 74 IPR002207 GO:0004601|GO:0006979|GO:0020037
Bpe14g00580 201 PRINTS Plant ascorbate peroxidase signature 101 122 IPR002207 GO:0004601|GO:0006979|GO:0020037
Bpe14g00580 201 PRINTS Plant ascorbate peroxidase signature 3 13 IPR002207 GO:0004601|GO:0006979|GO:0020037
Bpe14g00580 201 PRINTS Haem peroxidase superfamily signature 107 122 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bpe14g00580 201 PRINTS Haem peroxidase superfamily signature 44 61 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bpe14g00580 201 PRINTS Haem peroxidase superfamily signature 62 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bpe14g00580 201 ProSitePatterns Peroxidases proximal heme-ligand signature. 107 117 IPR019793 -
Bpe14g00580 201 SUPERFAMILY Heme-dependent peroxidases 5 195 IPR010255 GO:0004601|GO:0006979|GO:0020037
Bpe14g00580 201 CDD plant_peroxidase_like 2 193 - -
Bpe14g00580 201 ProSiteProfiles Plant heme peroxidase family profile. 1 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bpe14g00580 201 PANTHER L-ASCORBATE PEROXIDASE 6-RELATED 2 199 - -
Bpe14g00580 201 Gene3D - 2 195 - -
Bpe14g00580 201 Pfam Peroxidase 5 176 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe14g00580 K00434 E1.11.1.11; L-ascorbate peroxidase [EC:1.11.1.11] - vvi:100247405 327.791
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe14g00580 Bpe-Chr14:4895044 Bpe15g00817 Bpe-Chr15:18301489 7.41E-30 dispersed
Bpe14g00580 Bpe-Chr14:4895044 Bpe02g01647 Bpe-Chr2:19222704 7.44E-26 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g484 . . . . . . . . . Cmo12g00288 . . . Car12g00320 . Cpe07g00297 . Bhi04g00949 Tan02g2724 . . Hepe10g0250 . . . . . . . . . . . Cone17ag1019 . . . . Cme03g01615 Blo17g00021 . . Bda13g01263 Bpe14g00580 . . Bma02g00025 . . . . Cma12g00339 . . . . . . . . . . . Cla08g01335 Cam08g1797 Cec08g1376 Cco08g1504 Clacu08g1491 . Cre08g1278 Lsi08g01206 . Chy03g01119 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007203 1 5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3 2 1 37
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe14g00580 Bpe_Chr14 FPKM 430.796753 454.110535 547.833313 521.233704 131.942581 150.901566 122.177162 730.284668 770.289307 707.59021