Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe14g00600 ATGCAGGTTGTTGAGGTTTCGACTTCGAAGACTGGCAAACATGGTCATGCCAAGTGTCATTTTGTGGGGATTGATATTTTCACTGCAATGAAACTCGAGGACATCGTTCCAGCATCCCATAATATTTCTACAAAACTGTCTCATAATCTGCCCCCTTTCACGTTCGTTCCCCATTTTAACCGCACCGATTATCAGCTGATTGACATATCCGAAGATGGTTTTTTGAGTGTAAGTCTCTTAACTGACAATGGCAACACCAAGGATGATTTGAGGCTTCCTACTGATGATAGTTTACTCACTCAGGTATAA 309 41.75 MQVVEVSTSKTGKHGHAKCHFVGIDIFTAMKLEDIVPASHNISTKLSHNLPPFTFVPHFNRTDYQLIDISEDGFLSVSLLTDNGNTKDDLRLPTDDSLLTQV 102
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 4994417 4994940 + Bpe007248.1 Bpe14g00600 114909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe14g00600 102 SUPERFAMILY Translation proteins SH3-like domain 2 43 IPR008991 -
Bpe14g00600 102 PANTHER TRANSLATION INITIATION FACTOR 5A FAMILY MEMBER 2 98 IPR001884 GO:0003723|GO:0003746|GO:0043022|GO:0045901
Bpe14g00600 102 Gene3D - 59 102 IPR012340 -
Bpe14g00600 102 Pfam Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold 60 101 IPR020189 GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905
Bpe14g00600 102 Gene3D - 1 44 IPR014722 -
Bpe14g00600 102 SUPERFAMILY Nucleic acid-binding proteins 60 102 IPR012340 -
Bpe14g00600 102 ProSitePatterns Eukaryotic initiation factor 5A hypusine signature. 11 18 IPR019769 GO:0003723|GO:0003746|GO:0043022|GO:0045901|GO:0045905
Bpe14g00600 102 PANTHER BNAA07G09420D PROTEIN 2 98 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe02g01262 Bpe14g00600 CCT
Bpe02g00536 Bpe14g00600 CCT
Bpe04g00082 Bpe14g00600 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe10g00890 Bpe-Chr10:14632518 Bpe14g00600 Bpe-Chr14:4994417 7.51E-47 dispersed
Bpe11g01654 Bpe-Chr11:12682755 Bpe14g00600 Bpe-Chr14:4994417 1.70E-45 dispersed
Bpe13g00302 Bpe-Chr13:10857672 Bpe14g00600 Bpe-Chr14:4994417 5.46E-46 dispersed
Bpe14g00600 Bpe-Chr14:4994417 Bpe15g00593 Bpe-Chr15:16847999 9.52E-46 dispersed
Bpe14g00600 Bpe-Chr14:4994417 Bpe02g01262 Bpe-Chr2:16078949 1.01E-47 wgd
Bpe14g00600 Bpe-Chr14:4994417 Bpe02g00536 Bpe-Chr2:3464645 2.06E-44 wgd
Bpe14g00600 Bpe-Chr14:4994417 Bpe04g00082 Bpe-Chr4:630180 2.08E-31 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe14g00600 K03263 K02180 tcc:18610325 150.984