Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe14g00601 ATGAAGTTCATGAAGTTGGGCTCCAAGCTCGATGCTTTCCAATCCGATGGGAAAACTGCTAGGTCAGCGTATAAGAACAAGTCTTTCTTCTTCGTTCTACTTTTCTACTATGCTCTAATATTCTTCGATACGCATTCACGCAGGTACGTAGCATCTGAATTGCCCTCAGATGTCATCGTAAATGTGGGTGCAGTGAAGTTCCACCTTCACAAGTTTCCCCTCTTATCCAAGAGCAATTATTTGCAAAGATCAGTGTCAAAGGCCAACGACGAAAATGTTGAAGAACTTCAGATAGCTGATTTTCCAGGTGGCCCAAAAGCCTTTGAAATCTGTGCAAAATTCTGCTATGGAATGGCCGTCACTCTTAATGCTTATAACGTTGTGGCTGCTCGATGTGCGGCTGAGTACCTCGAGATGACAGAAGATATTGAAAAGGGAAACTTAATATTTAAAATTGAGGTGTTTCTAAACTCAAGTATATTTCGAAGTTGGAAAGATTCTATCATTGTTCTTCAAACAACCAGATCTGTTCTTCCTTGGTCTGAAGATCTGAAGATTGTTGGCAGATGCGTGGATTCCATTGCCTCAAAAACATCTGTAGATCCTGCAAACATCACTTGGTCATACACATGTAACCGTAAGCTATCAGAGCCAGATAGAATTATTGAAGATGGGATCAACTTCGAGGAAAAGATTGAATCCGTTCCGAGAGATTGGTGGGTTGAAGATATTTGTGAGCTGGAGATTGATCTGTTTAGACGAGTCATGATTGCAGTGAAATCGAAAGGAAGAATGGATGGGGGTGTTATTGGGGAGGCATTAAAAACTTATGTCATCAGATGGTTGCCAGATACTGTTGATGCTTTGGTCTCTGATGTTCATGCCAACAGAAACAAGTCTCTTGTGGAAACTATAATTTGTTTATTGCCGCCAGACAAGGGTATTGGTTGCTCCTGTAGCTTCTTGCTGAAACTCATGAAGGTCTCTATATTGGTCGGAGCTGATGAGTCGCTAAAGGAAGATTTGGTGAGGAGGGTTAGCCTGAAGTTGCACGAGGCTTCGGTCAAAGATATATTGATCCCAGCACTTCCCCCCAAGCTCACTAGATATGATGATGAATTAGTTCGAAACATGGTTAACCAATATTTAGACCACGACAAATGTAATTTGGATTTAGACACTGAGGAGAAGAAGGGGAAAGGATCGCATAATTTTTTGCTGGGGCATTGGCCATTGTTGAATGTTGGAAAATTGGTCGACAGGTATCTTGGAGAAATTGCGGTCGACCCTAACCTTTCACTGTCTAGTTTTATTGTGTTGTCGCAGTCAATCCCAGACTCGGGGAGGCCAATTCATGATGGGTTGTACAAAGCAGTTGATCTGTACCTGAAGGGGCACCTGAATCTGACCAAGGCTGAAAGGAAGAAGATATGTGGATTGATTGACGTAAAGAAACTGACAATGGAGGCATCCACGCATGCTGCACAGAATGAAAGACTTCCCCTCAGAGTTATAGTCCAAGTTCTCTTTTTTGAACAGGTTAGAGCCTCTACAGTCCAACAAGCCCCAAATTCTTCAAGACTAACGACGAACAATGATGACTCGTGCTACAAATCATTGGGAAGCTGTAAATTTCTGACGCAGCAGACCAATCAAATGAAACTGAATAACGATGCAAGGAAAAACAGAAAAAAGAACAGCAGCAGCGGAATACAGTTACTGCCTTCTCGATCAAGGAGAATTTTTGACAAGTTATGGAGTGTAGGTAAAGCGCAAGGAGAAAAAAACAGAGGGTCTGAGACATCTGGGAGTTCTCATAGTCCAACTTCAATGCTTCCAGCTGACATAAAATCCTCCTGCTCATCTTCCAGACACAGAAGGCATTCCATCTCCTAG 1896 42.41 MKFMKLGSKLDAFQSDGKTARSAYKNKSFFFVLLFYYALIFFDTHSRRYVASELPSDVIVNVGAVKFHLHKFPLLSKSNYLQRSVSKANDENVEELQIADFPGGPKAFEICAKFCYGMAVTLNAYNVVAARCAAEYLEMTEDIEKGNLIFKIEVFLNSSIFRSWKDSIIVLQTTRSVLPWSEDLKIVGRCVDSIASKTSVDPANITWSYTCNRKLSEPDRIIEDGINFEEKIESVPRDWWVEDICELEIDLFRRVMIAVKSKGRMDGGVIGEALKTYVIRWLPDTVDALVSDVHANRNKSLVETIICLLPPDKGIGCSCSFLLKLMKVSILVGADESLKEDLVRRVSLKLHEASVKDILIPALPPKLTRYDDELVRNMVNQYLDHDKCNLDLDTEEKKGKGSHNFLLGHWPLLNVGKLVDRYLGEIAVDPNLSLSSFIVLSQSIPDSGRPIHDGLYKAVDLYLKGHLNLTKAERKKICGLIDVKKLTMEASTHAAQNERLPLRVIVQVLFFEQVRASTVQQAPNSSRLTTNNDDSCYKSLGSCKFLTQQTNQMKLNNDARKNRKKNSSSGIQLLPSRSRRIFDKLWSVGKAQGEKNRGSETSGSSHSPTSMLPADIKSSCSSSRHRRHSIS 631
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 4995615 4998587 - Bpe007249.1 Bpe14g00601 114910

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe14g00601 631 Pfam NPH3 family 238 491 IPR027356 -
Bpe14g00601 631 MobiDBLite consensus disorder prediction 594 619 - -
Bpe14g00601 631 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN NPY1 42 616 IPR029961 GO:0060918|GO:0099402
Bpe14g00601 631 Gene3D Potassium Channel Kv1.1; Chain A 43 147 IPR011333 -
Bpe14g00601 631 SUPERFAMILY POZ domain 46 141 IPR011333 -
Bpe14g00601 631 Pfam BTB/POZ domain 54 144 IPR000210 GO:0005515
Bpe14g00601 631 CDD BTB_POZ_NPY3-like 48 151 - -
Bpe14g00601 631 ProSiteProfiles NPH3 domain profile. 238 515 IPR027356 -
Bpe14g00601 631 PANTHER OS12G0117600 PROTEIN 42 616 IPR043454 -
Bpe14g00601 631 MobiDBLite consensus disorder prediction 588 631 - -
Bpe14g00601 631 ProSiteProfiles BTB domain profile. 56 124 IPR000210 GO:0005515
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe14g00601 - - - zju:107419765 838.95
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe06g00011 Bpe-Chr6:136170 Bpe14g00601 Bpe-Chr14:4995615 1.29E-176 dispersed
Bpe13g00508 Bpe-Chr13:12458149 Bpe14g00601 Bpe-Chr14:4995615 4.36E-132 dispersed
Bpe13g01485 Bpe-Chr13:20195790 Bpe14g00601 Bpe-Chr14:4995615 3.53E-98 dispersed
Bpe14g00601 Bpe-Chr14:4995615 Bpe15g00019 Bpe-Chr15:2106890 1.66E-122 dispersed
Bpe14g00601 Bpe-Chr14:4995615 Bpe07g00274 Bpe-Chr7:1964944 1.18E-180 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g581 . . . . . . . . Cmo05g00352 Cmo12g00318 . Cma05g00348 . Car12g00348 Sed14g1268 Cpe07g00324 . Bhi04g00051 Tan02g2763 Cmetu04g0384 . . . . . . . . . . . . . . . . . . Cme03g01576 Blo17g00002 . Bda01g01360 . Bpe14g00601 . . Bma02g00007 . . . . Cma12g00365 . Car05g00294 Cpe11g00294 . . . . . . . . Cla08g01367 Cam08g1836 Cec08g1415 Cco08g1544 Clacu08g1531 . Cre08g1315 Lsi08g01250 . Chy03g01083 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004771 0 4 0 1 1 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 6 2 1 42
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe14g00601 Bpe_Chr14 FPKM 45.906879 49.494877 25.180403 22.80773 21.99439 20.929796 21.2841 28.642319 28.604589 27.35364