Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe14g00611 | ATGGAGGGATCTGCCTCTTCCCAGAGGAAAATGGGCAGAGGAAAGATCGAGATTAAGCGGATCAAAAACACTACGAATCGGCAAGTTACCTTCTGTAAGCGACGCAATGGGCTGCTGAAGAAAGCTTATGAATTGTCTGTTTTGTGCGATGCGGAAGTTGCACTCGTTGTCTTCTCCACCCGTGGTCGCCTCTATGAGTATGCCAATAATAGTGTAAGAGGGACTATAGAAAGGTATAAGAAAGCCTACTCAGACTCTTCCAGCACACCCACAGTTGCTGAAACTAGTACTCAGTTTTACCAGCAAGAAGCATCCAAACTAAGAAGACAGATCCGAGATATCCAGGCTTCAAACAGGCATATAACTGGAGAAGCCCTCAGCTCATTGTCGTTTAAGGATTTGAAGAATCTGGAGGGAAGATTGGAGAAAGGAATCAGTCGAATCCGAGCCAAAAAGGTATGA | 462 | 45.24 | MEGSASSQRKMGRGKIEIKRIKNTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSTRGRLYEYANNSVRGTIERYKKAYSDSSSTPTVAETSTQFYQQEASKLRRQIRDIQASNRHITGEALSSLSFKDLKNLEGRLEKGISRIRAKKV | 153 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 5079086 | 5081092 | - | Bpe014002.1 | Bpe14g00611 | 114920 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe14g00611 | 153 | PANTHER | MADS-BOX TRANSCRIPTION FACTOR ARLEQUIN | 8 | 152 | - | - | |
Bpe14g00611 | 153 | SUPERFAMILY | SRF-like | 12 | 85 | IPR036879 | GO:0003677|GO:0046983 | |
Bpe14g00611 | 153 | Pfam | K-box region | 94 | 152 | IPR002487 | GO:0003700|GO:0005634|GO:0006355 | |
Bpe14g00611 | 153 | PANTHER | SERUM RESPONSE FACTOR HOMOLOG | 8 | 152 | - | - | |
Bpe14g00611 | 153 | PRINTS | MADS domain signature | 33 | 48 | IPR002100 | GO:0003677|GO:0046983 | |
Bpe14g00611 | 153 | PRINTS | MADS domain signature | 48 | 69 | IPR002100 | GO:0003677|GO:0046983 | |
Bpe14g00611 | 153 | PRINTS | MADS domain signature | 13 | 33 | IPR002100 | GO:0003677|GO:0046983 | |
Bpe14g00611 | 153 | Pfam | SRF-type transcription factor (DNA-binding and dimerisation domain) | 20 | 67 | IPR002100 | GO:0003677|GO:0046983 | |
Bpe14g00611 | 153 | ProSiteProfiles | MADS-box domain profile. | 11 | 71 | IPR002100 | GO:0003677|GO:0046983 | |
Bpe14g00611 | 153 | SMART | madsneu2 | 11 | 70 | IPR002100 | GO:0003677|GO:0046983 | |
Bpe14g00611 | 153 | ProSiteProfiles | K-box domain profile. | 97 | 153 | IPR002487 | GO:0003700|GO:0005634|GO:0006355 | |
Bpe14g00611 | 153 | ProSitePatterns | MADS-box domain signature. | 13 | 67 | IPR002100 | GO:0003677|GO:0046983 | |
Bpe14g00611 | 153 | CDD | MADS_MEF2_like | 12 | 88 | IPR033896 | GO:0000977|GO:0045944 | |
Bpe14g00611 | 153 | Gene3D | - | 24 | 87 | IPR036879 | GO:0003677|GO:0046983 | |
Bpe14g00611 | 153 | Coils | Coil | 97 | 117 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe02g01163 | Bpe-Chr2:15251324 | Bpe14g00611 | Bpe-Chr14:5079086 | 4.65E-49 | dispersed | |
Bpe14g00493 | Bpe-Chr14:4388416 | Bpe14g00611 | Bpe-Chr14:5079086 | 6.99E-48 | dispersed | |
Bpe14g00611 | Bpe-Chr14:5079086 | Bpe03g00324 | Bpe-Chr3:4797532 | 7.40E-44 | dispersed | |
Bpe02g01071 | Bpe-Chr2:13324724 | Bpe14g00611 | Bpe-Chr14:5079086 | 2.53E-68 | transposed | |
Bpe14g00611 | Bpe-Chr14:5079086 | Bpe07g00511 | Bpe-Chr7:10389657 | 1.84E-79 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
22451 | PF01486 | K-box | 4.70E-19 | No_clan | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe14g00611 | K09264 | - | ath:AT3G58780 | 250.366 |