Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe14g00619 ATGCGTCGAGGCAGACCCTCAGATCCATCAGTCTCCCCCGTTGAACCCTGCATTCCAGCTAAAGAAACCAGATTCAGAGGTGTTCGCAAGCGCCCTTGGGGCAGATACGCCGCTGAAATCAGAGACCCTTGGAAGAAGACTAGGGTTTGGCCCGGCACCTTTGATTCCGCCGAAGATGCCGCTCGAGCTTACGACGCCGCCGCTCGTTCCCTCCGCGGCGCCAAGGCCAAAACTAACTTCCCTTTGCATCACTCCTCCATTTCCCTGCACCATCCGCTTCCTTTTTTCCAACCCCAACATCTTCATAATCCCAATGGATTCCCTAACATCGATTCTGTCCAGGTCAATCGCCCCACCACCAGCAGCTTGAGCTCCACCGTCGAGTCCTTCAGTGGTCCCAGGGTTTCCAATCACCTTGCTTCTATCCCCACGGCTCACAGGATGCCCGCGCACTCGATCTCACCTGATGACTGCCGGAGTGACTGCGATTCGTCGTCCTCTGTTGTGGATGACGACGACGATTGCGTTCTCACCTCCTTCCGCACAGTGCTGCCGTTCGATCTCAACCTACCCCCTCCGATGGACGGTCTGGATTTCACCGCTGATGATCTTCAGGCCACGGCCTTGTGCCTC 633 56.87 MRRGRPSDPSVSPVEPCIPAKETRFRGVRKRPWGRYAAEIRDPWKKTRVWPGTFDSAEDAARAYDAAARSLRGAKAKTNFPLHHSSISLHHPLPFFQPQHLHNPNGFPNIDSVQVNRPTTSSLSSTVESFSGPRVSNHLASIPTAHRMPAHSISPDDCRSDCDSSSSVVDDDDDCVLTSFRTVLPFDLNLPPPMDGLDFTADDLQATALCL 211
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 5122835 5123467 - Bpe025503 Bpe14g00619 114928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe14g00619 211 Pfam AP2 domain 23 73 IPR001471 GO:0003700|GO:0006355
Bpe14g00619 211 SUPERFAMILY DNA-binding domain 24 82 IPR016177 GO:0003677
Bpe14g00619 211 PRINTS Ethylene responsive element binding protein signature 47 63 IPR001471 GO:0003700|GO:0006355
Bpe14g00619 211 PRINTS Ethylene responsive element binding protein signature 25 36 IPR001471 GO:0003700|GO:0006355
Bpe14g00619 211 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 19 186 - -
Bpe14g00619 211 SMART rav1_2 24 87 IPR001471 GO:0003700|GO:0006355
Bpe14g00619 211 ProSiteProfiles AP2/ERF domain profile. 24 81 IPR001471 GO:0003700|GO:0006355
Bpe14g00619 211 Gene3D AP2/ERF domain 23 83 IPR036955 GO:0003700|GO:0006355
Bpe14g00619 211 MobiDBLite consensus disorder prediction 146 165 - -
Bpe14g00619 211 CDD AP2 23 81 IPR001471 GO:0003700|GO:0006355
Bpe14g00619 211 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 3 19 186 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00777 Bpe-Chr3:27747543 Bpe14g00619 Bpe-Chr14:5122835 2.08E-42 dispersed
Bpe09g00157 Bpe-Chr9:1059463 Bpe14g00619 Bpe-Chr14:5122835 6.48E-36 dispersed
Bpe14g00619 Bpe-Chr14:5122835 Bpe15g00166 Bpe-Chr15:12143119 2.18E-61 dispersed
Bpe14g00619 Bpe-Chr14:5122835 Bpe07g00522 Bpe-Chr7:10998146 2.71E-89 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22452 PF00847 AP2 2.20E-13 CL0081 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe14g00619 K09286 - csv:101221703 258.455