Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe14g00626 ATGGGGAAGAAACTTGACCGCTTTCTCCTGCCTATCTTCTTCTTCCTCTTGCTGGCTCATTCCGGCCTTTCTCGGCTGATTACGGTTGAATCGAGCTTCGGATTGGTGGAAGACGGAGTCCACCATAATTTGGAACCGGGTCATCTTTATCTGAATCGGTTGATTTCTTCGGAAGCTTGCTCTCCCACTTACGGATTCTTACCTTGCACAACTACTGTACTTGGAAATATCTTCCTCGTTCTTGTTTATGGCTACTTCATGTTCGTTGGAGCCAAGTTATTATCAGAAGGCAGTGAAATTTTGCTTCAGATTCTTGGTCCTGGCCTCGTCGGCGGCTTCTTCCTCCCTGTTTTGAGCTCTGTTCCTGATGCCACTATAATCCTGGCTTCGGGTCTGTCCGGAAGCAAAGAAACGGCGCAAAGTCAGGTCTCGGTCGGGATGGGATTGCTTGCCGGATCTAATGTTCTGCTTCTAACACTCTTGTGGGGCGCCTCTCTCATAGTTGGCAAGTGTGATCTGGAAAACTCAGTTGCAGTGGATAAGAAAGACACCATGGCCTTTAGCTTGACAAGATCTGGGATAAGTACTGATGTTTGGACTCGATATGGTGCTCGGATTATGCTTATTTCCATAATCCCCTTCTTGATCGTTCAATTAACCAGTGTTTTGCAAGGAAGTTCGGAGAGTCGGGTCGTGATTCTGATCTCGTTCATCGTCTCCATTTCTTTCTTCATTGCTTACTGCGTTTATCAGGTTTGTCAGCCGTGGATTCAGACGAGGAAGCTTGCTTATGTGAGACACAAGTGCTTAATGTCTGGAATTCTAAAATACTTGAAAAGGAGAACTTTGGGGAATCTTCTCACAGACGATGGTGAACCTGACAGAGAAGCAATAGAAAGGCTCTTCATGACCCTGGATCTGGATAGGAATGGGTTCCTTTCGGCGATCGAGATCAGAGCTCTGATAGTTGGAATCGAGCTTGAAGACGCAGACTCGAACATCGAAAATGCAATTGATAATCTGATAGATGACTTCGATATGTCGAGAGATTCACATATCGACATGGATGAGTTTGTTGCAGGGATCACGAAGTGGATTAACCGAGCTAAACGATCTGCAATCATGGATCGCTCGCGCACATTGAGTTTTCTGACGAACTTCGACGAGAAGGTGAAGAGAGAATGGAATAGGATGGGGAACGGGGAGAGTGGCGAGGTAGAAGAAGCTGAACCGGGAAAGAAAAGATGGAGCGGGGTTAAAGCAGGTATGATGTTGCTGTCCGGAACCGCCATTGCTGCTGCTTTCGCAGATCCGATCGTGGATTCAGTAGACAACTTCTCGACTGCGACTTCCATTCCTTCATTCTTCGTCTCCTTCGTGATTCTCCCGTTTGTTAGCTCCAGTGAGGTGATTTCCACCATGATCTTCTCCTCCCAGAAAAAACGAAGCACGGCTTCTCTGGCCTACTCAGAGATATATGGGTCGGTGACGCTGGGCAATGTGCTTTCTCTGGCGGTGTTTCTGGGTCTTGTTTACTTCAGAGACTTGACATGGAGCTTCTCGGCGGAGGTGCTGGTGGTTCTAATCGTGTGCTTGGTGATGGGGGGCATTGCGGGGAGCTTGACGACGTTTCGGCTCTGGATGTGCTGCATAGCCTTCGCCCTTTACCCTCTGTCTCTCTTGCTCGTCTATGTTCTGGACTACATTTTGGGATGGTCCTAG 1722 47.91 MGKKLDRFLLPIFFFLLLAHSGLSRLITVESSFGLVEDGVHHNLEPGHLYLNRLISSEACSPTYGFLPCTTTVLGNIFLVLVYGYFMFVGAKLLSEGSEILLQILGPGLVGGFFLPVLSSVPDATIILASGLSGSKETAQSQVSVGMGLLAGSNVLLLTLLWGASLIVGKCDLENSVAVDKKDTMAFSLTRSGISTDVWTRYGARIMLISIIPFLIVQLTSVLQGSSESRVVILISFIVSISFFIAYCVYQVCQPWIQTRKLAYVRHKCLMSGILKYLKRRTLGNLLTDDGEPDREAIERLFMTLDLDRNGFLSAIEIRALIVGIELEDADSNIENAIDNLIDDFDMSRDSHIDMDEFVAGITKWINRAKRSAIMDRSRTLSFLTNFDEKVKREWNRMGNGESGEVEEAEPGKKRWSGVKAGMMLLSGTAIAAAFADPIVDSVDNFSTATSIPSFFVSFVILPFVSSSEVISTMIFSSQKKRSTASLAYSEIYGSVTLGNVLSLAVFLGLVYFRDLTWSFSAEVLVVLIVCLVMGGIAGSLTTFRLWMCCIAFALYPLSLLLVYVLDYILGWS 573
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 5159307 5161516 + Bpe014014.1 Bpe14g00626 114935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe14g00626 573 SMART efh_1 297 325 IPR002048 GO:0005509
Bpe14g00626 573 SMART efh_1 337 365 IPR002048 GO:0005509
Bpe14g00626 573 CDD EFh 298 363 IPR002048 GO:0005509
Bpe14g00626 573 PANTHER ION BINDING PROTEIN, PUTATIVE-RELATED 8 567 - -
Bpe14g00626 573 ProSiteProfiles EF-hand calcium-binding domain profile. 293 328 IPR002048 GO:0005509
Bpe14g00626 573 Gene3D - 269 392 - -
Bpe14g00626 573 Pfam Sodium/calcium exchanger protein 424 564 IPR004837 GO:0016021|GO:0055085
Bpe14g00626 573 Pfam Sodium/calcium exchanger protein 78 252 IPR004837 GO:0016021|GO:0055085
Bpe14g00626 573 ProSitePatterns EF-hand calcium-binding domain. 306 318 IPR018247 -
Bpe14g00626 573 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 8 567 IPR004713 GO:0006812|GO:0008324|GO:0016021
Bpe14g00626 573 ProSiteProfiles EF-hand calcium-binding domain profile. 333 368 IPR002048 GO:0005509
Bpe14g00626 573 SUPERFAMILY EF-hand 292 364 IPR011992 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe14g00626 Bpe15g00176 CCT
Bpe12g00216 Bpe14g00626 CCT
Bpe14g00626 Bpe15g00176 ECH
Bpe12g00216 Bpe14g00626 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g01003 Bpe-Chr8:12364956 Bpe14g00626 Bpe-Chr14:5159307 0 dispersed
Bpe14g00626 Bpe-Chr14:5159307 Bpe13g00582 Bpe-Chr13:12954909 4.16E-06 dispersed
Bpe14g00626 Bpe-Chr14:5159307 Bpe01g00880 Bpe-Chr1:19156829 1.00E-107 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe14g00626 - - qsu:112040079 663.299