Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe14g00712 ATGAGCTCCAAACACAACTCGCCCGGAGCTTTCACCTCCCATTTCCCCTTCTCCGTTTCCGGCTCCACCTTTGCTGGTGCTGCTTCTTTGGAAGCTACTGCTCTGGCTTTCAAACGCCACCACCAGAATTCTCGCCGGAAGCGGTCTAAAATGATGAGAATTGACGACCATCAGGCTGCTGGGTCCGGTTTAAGCGGATTTTCCAAGCAGAAATACGCCAAAAAGCCTGACCCGAACGCACCCAAAATCACCACACCTTGTACCGAATGTGGGAAAGAGTTTTGGTCGTGGAAAGCCCTTTTTGGCCACATGAGGTGCCATCCTGAACGACAATGGCGAGGTATAAACCCACCGCTAAATCTCCGGCCACCAAATATCTACCCCTTTTGCGATTTGGAATCTATGACAGAAGAAGAAAAGGAGGTTGCTGCGTGTTTACTTCTACTGGCAACGACTCCAACCGCCATTGACAACTGCGCCGACCCGTCTTGCCGATCGTTCGAGTGCTCGAGTTGCAAGAAAGTGTTCAGATCACACCAGGCTCTGGGCGGCCACAGAGCGACTCACAGGAACGTGAAAGGCTGCTTCGCCATAGCGAGAAATGGTTCGGAGCCCGAAGACGATCAGATGTGCGAACGAGAGAGGGATACATCTGCGGAGGAGAAGACGGCGGTGGCGTTCAGCGCAGGTGGACACAGGTGCAGTATTTGTACGAGGGTTTTCTCGAGTGGGCAAGCACTAGGTGGGCATAAGAGATGCCACTGGGAGAATAGCGAGGATCCGCCATTGGTGAGCCCTTTTGTTTCTTCTTCTGCAAGAGAAGGTTGTGGACATTTGGATTTGAATTTGCCTCCGCCATTGGAGGATGATTACTCCTCATCTTCTCATTCTTCTGGCCTAACTCTGGATTTAAGGTTGGGTCTATGA 927 51.78 MSSKHNSPGAFTSHFPFSVSGSTFAGAASLEATALAFKRHHQNSRRKRSKMMRIDDHQAAGSGLSGFSKQKYAKKPDPNAPKITTPCTECGKEFWSWKALFGHMRCHPERQWRGINPPLNLRPPNIYPFCDLESMTEEEKEVAACLLLLATTPTAIDNCADPSCRSFECSSCKKVFRSHQALGGHRATHRNVKGCFAIARNGSEPEDDQMCERERDTSAEEKTAVAFSAGGHRCSICTRVFSSGQALGGHKRCHWENSEDPPLVSPFVSSSAREGCGHLDLNLPPPLEDDYSSSSHSSGLTLDLRLGL 308
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 5543607 5544626 + Bpe014102.1 Bpe14g00712 115021
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe14g00712 308 SUPERFAMILY beta-beta-alpha zinc fingers 86 189 IPR036236 -
Bpe14g00712 308 ProSiteProfiles Zinc finger C2H2 type domain profile. 167 194 IPR013087 -
Bpe14g00712 308 SMART c2h2final6 167 189 IPR013087 -
Bpe14g00712 308 SMART c2h2final6 85 107 IPR013087 -
Bpe14g00712 308 SMART c2h2final6 232 254 IPR013087 -
Bpe14g00712 308 Gene3D Classic Zinc Finger 164 254 - -
Bpe14g00712 308 ProSitePatterns Zinc finger C2H2 type domain signature. 87 107 IPR013087 -
Bpe14g00712 308 ProSitePatterns Zinc finger C2H2 type domain signature. 234 254 IPR013087 -
Bpe14g00712 308 ProSiteProfiles Zinc finger C2H2 type domain profile. 85 112 IPR013087 -
Bpe14g00712 308 ProSiteProfiles Zinc finger C2H2 type domain profile. 232 259 IPR013087 -
Bpe14g00712 308 SUPERFAMILY beta-beta-alpha zinc fingers 231 257 IPR036236 -
Bpe14g00712 308 Pfam C2H2-type zinc finger 232 256 - -
Bpe14g00712 308 Pfam C2H2-type zinc finger 85 109 - -
Bpe14g00712 308 Pfam C2H2-type zinc finger 167 190 - -
Bpe14g00712 308 MobiDBLite consensus disorder prediction 59 78 - -
Bpe14g00712 308 MobiDBLite consensus disorder prediction 287 308 - -
Bpe14g00712 308 ProSitePatterns Zinc finger C2H2 type domain signature. 169 189 IPR013087 -
Bpe14g00712 308 PANTHER ZINC FINGER PROTEIN ZAT2-RELATED 29 308 - -
Bpe14g00712 308 PANTHER ZINC FINGER PROTEIN ZAT2-RELATED 29 308 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe13g00774 Bpe-Chr13:14217686 Bpe14g00712 Bpe-Chr14:5543607 2.95E-28 dispersed
Bpe14g00712 Bpe-Chr14:5543607 Bpe14g01013 Bpe-Chr14:7537298 3.53E-30 dispersed
Bpe14g00712 Bpe-Chr14:5543607 Bpe07g00672 Bpe-Chr7:13407320 2.60E-150 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22464 PF13912 zf-C2H2_6 3.70E-11 CL0361 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe14g00712 - - pvy:116112838 274.633