Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe14g00716 ATGGCGACCAACAGATTCGTGTGTGAAATATGCGGGAAGGGTTTTCAGAGAGATCAAAATCTTCAACTCCATAGGAGAGGACATAATCTACCATGGAAGCTTAAGCAGAGAAGCAGCACAGATGTGAGAAAGAGAGTTTACGTCTGCCCAGAAAAGAACTGCGTTCATCATCACCCATCCAGGGCTCTTGGCGACCTAACTGGAATCAAAAAGCACTTCTGCAGAAAACATGGGGAGAAGAAATGGAAGTGCGAGAAATGCTCTAAACGATACGCTGTTCAGTCGGACTGGAAAGCTCACTCGAAAACCTGTGGAACTAGAGAGTATAAGTGCGACTGTGGAACTATATTTTCACGGAGAGACAGTTTCATCACTCACAGAGCTTTCTGTGACGCACTAGCCGAAGAAACAGCTCGAGTGAATGAAAACTCCCAGTTGATAATCGGCAATCGATCTCAATCAAAGGAGGTCAACTATAAAAACCACAATAATCACGATCAAGTTCATCAACATGGGTTCCTCAGTTCAGGCTCAATTTTCAGTTATCCTCTACCGTCGGATTATGAGTCAAACTGGATTCTTGGATCTCAGTTTTCATCGGAAAAGGCTCTGAATGAAGAGCTAACCAGTACCTCTGTTCCATTTGATAGTATAACAGAAGGAGGAGCTCAGCTAGTTAGCGTATCTTCCTTATTAAGTCAAGATCATCAATCTCATTGTAGAAGTACTCTTCAAGCTAATATGTCAGCCACTGCTTTGCTGCAAAAAGCTGCTGAAATTGGAGCAACTTCCAGCGACCCATTATTGACTGGGTTAAAGAGCAGTGAAAGTTCAGCTCAAGAAGGGAGCAGAATCAGTGGATTTTATGGTTCAACTTACTCCATAGCCAGTAGTTTTGGAGGAAAAGATATGGAGGACCCATCAGGAAATCTGGTGCTGAATTATCCTGCAAAACGCAGAGCAATTCAGATCGAAGAGAGTCCAAAAGGAGGAGGACAAACTAGAGATTTTCTTGGCGTTGGCGTACAAACCCTGTGTCACTCTTCATCAATCAATCGATGGATTTGA 1068 43.26 MATNRFVCEICGKGFQRDQNLQLHRRGHNLPWKLKQRSSTDVRKRVYVCPEKNCVHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREYKCDCGTIFSRRDSFITHRAFCDALAEETARVNENSQLIIGNRSQSKEVNYKNHNNHDQVHQHGFLSSGSIFSYPLPSDYESNWILGSQFSSEKALNEELTSTSVPFDSITEGGAQLVSVSSLLSQDHQSHCRSTLQANMSATALLQKAAEIGATSSDPLLTGLKSSESSAQEGSRISGFYGSTYSIASSFGGKDMEDPSGNLVLNYPAKRRAIQIEESPKGGGQTRDFLGVGVQTLCHSSSINRWI 355
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 5582484 5583993 - Bpe014107.1 Bpe14g00716 115025
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe14g00716 355 SUPERFAMILY beta-beta-alpha zinc fingers 5 102 IPR036236 -
Bpe14g00716 355 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 1 349 - -
Bpe14g00716 355 Gene3D Classic Zinc Finger 39 130 - -
Bpe14g00716 355 ProSitePatterns Zinc finger C2H2 type domain signature. 8 28 IPR013087 -
Bpe14g00716 355 ProSiteProfiles Zinc finger C2H2 type domain profile. 6 28 IPR013087 -
Bpe14g00716 355 Gene3D Classic Zinc Finger 2 29 - -
Bpe14g00716 355 PANTHER ZINC FINGER PROTEIN MAGPIE 1 349 - -
Bpe14g00716 355 SMART c2h2final6 82 102 IPR013087 -
Bpe14g00716 355 SMART c2h2final6 6 28 IPR013087 -
Bpe14g00716 355 SMART c2h2final6 47 77 IPR013087 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe14g00716 Bpe-Chr14:5582484 Bpe10g00110 Bpe-Chr10:1913481 4.33E-97 dispersed
Bpe14g00716 Bpe-Chr14:5582484 Bpe09g00021 Bpe-Chr9:171971 5.02E-98 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22465 None None None None Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe14g00716 K25870 - qsu:112011855 445.277