Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe14g00730 ATGTCTTGTTCTTCCGGAGCTAAGAGTTTTTTCAAGCTTTCGAAGTTATTTGTGAAGATTCAAAGGTGGATTTTGATGGGAATGACTCAGAATTGCAAGTTCTGTGTTTCTTGTGGAAAAGTATCAGCTGGGTTTAGGTTGAAGAAGGCGAAGGAGGATGGGAATGTCCATTCTTCGATACCAGGGTGGAAAAGAAAGTTTCTTGTTCTATGTGCTGTAGGTTTAGTTTTCATTTTCAGTATCTGTTTTTTCTGGAGTTCTTTCGATGGTTCATGGACGTCTAAACAAAAGCCCTTGAGTTCATTCGGAGGCAAAACTGAAACCTTTCTGCAGCATTTCAATGTCAGCAATAATCACCTTCTGTTCCTTAGTTCTTTATTTGCCAAATCAGATCAGATAGTATCATTCCAATGTACCAAAGGTTCGAGTCCTGACTTGCATATCGAAAATGGCATTTCTTGTGCTTTGAGGGTACTATCCTCAGAGGAGCTACTAGTCCAACACGATCAATCGATCGAGGAGCACTTGGAATCAAATGATCAATGCCCAATTTTCGGTGAGAAGATCCCAAATTACTTCAATCGGTCTCTCTTTCACAATAAGAGAATGTTAGCTTCAGATTCTTTGATTTCGTCAAAACCTACTGATATTCACTCTTTCAGAAAGAAGATCTTGCAAACAAGGGGATTCCCGAGCTGTGCACAAGATTGTTGTGAAAGTTTATGTAGTTTGGTAAAGGGAAGCTTGTGGGTGATTTTTGGAGTGATTATATGTTGGATGATCCCTTGTTTTGACTTAAAATTGTGGTGGATTCAAAACGAACTGGTAGATCAAAATATTCAGCAACAGCCAGTGGCTAATCAGGTGTTATCACAGCAAAAGCAGCAGAAGGTGTTTCCTCAGCAAGTACAGCCGCATCATGCCAAGAATCCCCCTAAAGGGGCTGGAAAGTGGAGGAAGAAGCTTCTACTACTGTTTGTATTACTCGGTGTCATTACTTCGATTTGGTTATTTTGGGATTTAAATAGGAAAATTAATTTGAGGAGAGAAGAGACACTTGCCAACATGTGTGATGAACGGGCTAGAATGTTGCAGGACCAGTTTAATGTGAGCATGAACCATGTTCATGCCTTGGCTATTCTTGTCTCAACATTTCACCATGGGAAACACCCTTCTGCGATGGATCAGAAAATTTTTGGTGAATATACGGAAAGAACGGCTTTTGAGAGACCTTTAACCAGTGGTGTTGCATATGCTTTAAGAGTGAACCACTTGGAAAGAGATATATTTGAGAAAAAACATGGGTGGACAATAAAGAAAATGGAAACGGAGGACCAGACGCTGGTTCGAGATTGTATCCCAGAAAGTTTGGACCCTGCACCCATTCAAAAGGAATATGCACCTGTAATATTTTCCCAAGAAACTGTCTCCCATATTGTCTCTATTGACATGATGTCCGGAAAGGAAGATCGTGAAAACATATTGCGGGCCAGAGCATCTGGGAAGGGAGTACTTACATCGCCTTTTAAGCTACTGAAATCCAATCATCTTGGTGTTGTTCTAACATTTGCTGTCTATAAGAAGGAGCTTCCCCCTGATGCTACACCAGATCAACGTGTTGAAGCTACTGTCGGGTATCTTGGGGCATCTTATGATGTACCGTCTCTGGTGGAGAAGCTTCTGCACCAGCTTGCCAGCAAACAGACAATCGTCGTGAATGTATACGATACGACGAATGATTCTTCTCCCATAAAGATGTATGGTTCAGATTTCACTGATACGGGGCTACTGCAAGTTAGTAACCTTGATTTTGGTGATCCACAGAGGAAGCATGAGATGCATTGTAGATTCAAACAAAAGCCAACCTTACCTTGGACGGCAATAAATGCTTCTGTGGCAGTCCTTGTCATTACTCTCCTAGTCGGCCATATATTTCACGCTGCTATTTGTCGAATTGCAGAAGTTGAGAACGATTATCGGGAGATGACAGAGCTCAAAGTTCGTGCCGAAGCTGCAGATGTGGCAAAATCTCAGTTTCTTGCAACTGTTTCCCATGAGATCAGGACACCAATGAATGGGGTATTAGGAATGCTAAAATTGCTGATGGACACGGACCTCGATGAAGAACAATTGGACTACGCTTATACTGCCCATGACAGTGGAGAAAGTCTAATATCTCTTATAAATGAGGTCCTCGATCAGGCTAAGATAGAATCAGGCAGGCTTGAACTTGAATCTGTACCTTTTGATCTTCGAGCTGTACTTGACAACGTGCTCTCACTTTTTTCTGGAAAATCTAATGAAAAGCGGATTGAGCTTGCTGTTTATGTCTCTTCGCTGGTACCTGAAGTTGTGATTGGTGATCCTGGCCGATTCAGGCAGATAATCACGAATCTTGTTGGAAATTCTATTAAGTTTACTCATAACAAAGGACATATCTTCATCTCAGTGCATCTGGCAGATGAAGTTTTGGGTCCACTTGATGATATGGATAAAGTTCTGAGACAAGGGTTGAGTTTAGTTAAAGACACGTCGAGCAATACCTATAATACGCTAAGCGGGTTTCCTGTCGTTAATAGATGGAAAAGCTGGAAAGTTTTCAAGAATTTTTGCAGGACTGATGATACTGAGCATTCGGATATGATCAAATTATTGATTACTGTTGAGGATACAGGTGTGGGTATTGCTCTAAATGCTCAAAGCCGAATCTTCACACCTTTCATGCAGGCTGATAGTTCTACATCGAGGACTTATGGTGGAACCGGAATAGGATTAAGCATTAGCAAATGTCTTGTGGCTCTCATGGATGGAGAGATTGGCTTTGTAAGTGAACCTGGCACTGGAAGTACGTTTTCATTCACGGGGTCTTTTAGAAGAGGGGAAAGTAGCTCCCTTGAAGCAAAAAGGCAGCAGTATGATCCAGTTGTGATGGAATTTCGAGGGCAGAAGGCCTTGATAATAGATAATAGCAGTTTACGAGCCGAGGTTACCAAATATTATCTTCATAGATTGGGGATCTCTGTCGATATTGCTTTCAGTCTCCGGCACATCTACCAATCTCTTTCTAATACCAACAGTGTTTCAAGTGATTTGGCAATGGTTCTTGTTGACAAAGATATATGGGACAAAGAAGGGGGTCTGAAATTCCATCAAAGTCTAAAAGAGCGAATAGAAAACAGCGAAGAAGAAGCTCAGAAAAGCATTCCAAAGATTTTTCTGTTGGCTACATCCATCAGTCCCAATGAGCGAAACAAGCTAAGGTCAGCAGGACTTCTAAATAACGTAATGATGAAGCCTCTACGATTAAGTGTCATGATCGGTTGCTTCCAAGAGGCATTGGGAGGCGGTAAGAAGAGACAAATAAATAGAAAGAAACCATCTACACTTGGGACCTTACTCAGAGGAAAGAGCATTTTGGTGGTGGATGATAATGTAGTCAACAGAAGAGTTGCAGAAGGTGCTCTGAAGAAATATGGAGCGATTGTCACCTGCGTGGAAAGCGGCCAAGATGCTCTTTCCATGCTTAAACCACCCCACAAATTCGATGCATGTTTTATGGATCTTCAGATGCCAGAGATGGATGGGTACTTTGAAGCAACAAGGCAAATCCGACGATTGGAAAGAGAGGCTAACGATAAAATTGCATCTGGAGAAGCAACGATTGAGATGTCTGGAAATGTGACCCATTGGTACATACCAATATTGGCCATGACTGCAGATGTAATTCAAGCTACAAATGAAGAGTGTATGAAGTGTGGGATGAATGATTACGTATCAAAGCCATTCGCCGAAGAACAACTTTATGCGGCAGTTTCACGTTTCTTTGAGTCTGGCTGA 3837 41.73 MSCSSGAKSFFKLSKLFVKIQRWILMGMTQNCKFCVSCGKVSAGFRLKKAKEDGNVHSSIPGWKRKFLVLCAVGLVFIFSICFFWSSFDGSWTSKQKPLSSFGGKTETFLQHFNVSNNHLLFLSSLFAKSDQIVSFQCTKGSSPDLHIENGISCALRVLSSEELLVQHDQSIEEHLESNDQCPIFGEKIPNYFNRSLFHNKRMLASDSLISSKPTDIHSFRKKILQTRGFPSCAQDCCESLCSLVKGSLWVIFGVIICWMIPCFDLKLWWIQNELVDQNIQQQPVANQVLSQQKQQKVFPQQVQPHHAKNPPKGAGKWRKKLLLLFVLLGVITSIWLFWDLNRKINLRREETLANMCDERARMLQDQFNVSMNHVHALAILVSTFHHGKHPSAMDQKIFGEYTERTAFERPLTSGVAYALRVNHLERDIFEKKHGWTIKKMETEDQTLVRDCIPESLDPAPIQKEYAPVIFSQETVSHIVSIDMMSGKEDRENILRARASGKGVLTSPFKLLKSNHLGVVLTFAVYKKELPPDATPDQRVEATVGYLGASYDVPSLVEKLLHQLASKQTIVVNVYDTTNDSSPIKMYGSDFTDTGLLQVSNLDFGDPQRKHEMHCRFKQKPTLPWTAINASVAVLVITLLVGHIFHAAICRIAEVENDYREMTELKVRAEAADVAKSQFLATVSHEIRTPMNGVLGMLKLLMDTDLDEEQLDYAYTAHDSGESLISLINEVLDQAKIESGRLELESVPFDLRAVLDNVLSLFSGKSNEKRIELAVYVSSLVPEVVIGDPGRFRQIITNLVGNSIKFTHNKGHIFISVHLADEVLGPLDDMDKVLRQGLSLVKDTSSNTYNTLSGFPVVNRWKSWKVFKNFCRTDDTEHSDMIKLLITVEDTGVGIALNAQSRIFTPFMQADSSTSRTYGGTGIGLSISKCLVALMDGEIGFVSEPGTGSTFSFTGSFRRGESSSLEAKRQQYDPVVMEFRGQKALIIDNSSLRAEVTKYYLHRLGISVDIAFSLRHIYQSLSNTNSVSSDLAMVLVDKDIWDKEGGLKFHQSLKERIENSEEEAQKSIPKIFLLATSISPNERNKLRSAGLLNNVMMKPLRLSVMIGCFQEALGGGKKRQINRKKPSTLGTLLRGKSILVVDDNVVNRRVAEGALKKYGAIVTCVESGQDALSMLKPPHKFDACFMDLQMPEMDGYFEATRQIRRLEREANDKIASGEATIEMSGNVTHWYIPILAMTADVIQATNEECMKCGMNDYVSKPFAEEQLYAAVSRFFESG 1278
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 5663226 5670656 - Bpe014111.14 Bpe14g00730 115039
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe14g00730 1278 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 787 954 IPR003594 -
Bpe14g00730 1278 SUPERFAMILY CheY-like 1133 1275 IPR011006 -
Bpe14g00730 1278 PANTHER TWO-COMPONENT HISTIDINE KINASE 307 1277 - -
Bpe14g00730 1278 Coils Coil 652 672 - -
Bpe14g00730 1278 ProSiteProfiles CHASE domain profile. 390 614 IPR006189 -
Bpe14g00730 1278 CDD HATPase_EvgS-ArcB-TorS-like 792 954 - -
Bpe14g00730 1278 ProSiteProfiles Response regulatory domain profile. 1137 1275 IPR001789 GO:0000160
Bpe14g00730 1278 PANTHER HISTIDINE KINASE 2 307 1277 - -
Bpe14g00730 1278 CDD HisKA 675 736 IPR003661 GO:0000155|GO:0007165
Bpe14g00730 1278 ProSiteProfiles Response regulatory domain profile. 983 1113 IPR001789 GO:0000160
Bpe14g00730 1278 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 661 741 IPR036097 GO:0000155|GO:0007165
Bpe14g00730 1278 Gene3D - 646 738 - -
Bpe14g00730 1278 ProSiteProfiles Histidine kinase domain profile. 682 959 IPR005467 -
Bpe14g00730 1278 Pfam His Kinase A (phospho-acceptor) domain 675 740 IPR003661 GO:0000155|GO:0007165
Bpe14g00730 1278 Gene3D CHASE domain 394 621 IPR042240 -
Bpe14g00730 1278 SMART REC_2 1136 1271 IPR001789 GO:0000160
Bpe14g00730 1278 CDD REC_hyHK_CKI1_RcsC-like 1138 1271 - -
Bpe14g00730 1278 Pfam Response regulator receiver domain 1138 1271 IPR001789 GO:0000160
Bpe14g00730 1278 Gene3D - 739 959 IPR036890 -
Bpe14g00730 1278 PRINTS Bacterial sensor protein C-terminal signature 943 956 IPR004358 GO:0016310|GO:0016772
Bpe14g00730 1278 PRINTS Bacterial sensor protein C-terminal signature 919 937 IPR004358 GO:0016310|GO:0016772
Bpe14g00730 1278 PRINTS Bacterial sensor protein C-terminal signature 884 898 IPR004358 GO:0016310|GO:0016772
Bpe14g00730 1278 PRINTS Bacterial sensor protein C-terminal signature 902 912 IPR004358 GO:0016310|GO:0016772
Bpe14g00730 1278 Gene3D - 1131 1277 - -
Bpe14g00730 1278 Gene3D - 976 1115 - -
Bpe14g00730 1278 SMART CHASE_2 390 589 IPR006189 -
Bpe14g00730 1278 SMART HisKA_10 675 740 IPR003661 GO:0000155|GO:0007165
Bpe14g00730 1278 SMART HKATPase_4 787 959 IPR003594 -
Bpe14g00730 1278 Pfam CHASE domain 393 587 IPR006189 -
Bpe14g00730 1278 SUPERFAMILY CheY-like 978 1114 IPR011006 -
Bpe14g00730 1278 Gene3D - 341 393 - -
Bpe14g00730 1278 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 729 954 IPR036890 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00962 Bpe-Chr2:8964442 Bpe14g00730 Bpe-Chr14:5663226 5.21E-08 dispersed
Bpe03g00033 Bpe-Chr3:566964 Bpe14g00730 Bpe-Chr14:5663226 0 dispersed
Bpe04g00886 Bpe-Chr4:5931196 Bpe14g00730 Bpe-Chr14:5663226 4.41E-91 dispersed
Bpe13g00409 Bpe-Chr13:11790896 Bpe14g00730 Bpe-Chr14:5663226 2.43E-12 dispersed
Bpe14g00730 Bpe-Chr14:5663226 Bpe15g00478 Bpe-Chr15:16103551 3.66E-41 dispersed
Bpe14g00730 Bpe-Chr14:5663226 Bpe05g00945 Bpe-Chr5:22382722 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22468 PF03924 CHASE 1.10E-32 CL0165 Bpe TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe14g00730 K14489 - zju:107417004 1649.03