Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe14g00787 ATGACATATTCCAATCCTCTCACCTTTCTTTTGACGTTTCTGTCAGTTCGGGGTCCAGAAGGGTTCTCCTCTTGGGACGGCCCTCCCTTTATCAATGGACAGCCCAGGATCAAGCGTGAAAACGTTCCTTGCACTAATGCTAAATTTAGTGAAGATGGGTCCAGACTAATGGTTACAAAATCTGATTCTGCTATCAGCATCTATGATTGCAGCACTTTCGAGGAGATTCGGTCCTTTCAAATTTCCAGCTTGATTGCTGCCTCATTGTCCCCCTGTGGGACTTTTCTTCAAACCTTTAAGAAATCATCAACATCTCAGGAAAGGAACGTAGCATTGTGGAAGACGGGAACAGGTGATGCTGTTTATCACCAATTCCAAAAGAACATGACAAAAACAACATGGCCTTCGATTCGATTCAGCGATGATGAAGCCGTTGCATGTCGTATGGCAACCAATGAAATACAATTCTTTGATGCTTTAGATTTTTCCAAAGGAGTTATATACCGGCTTAAAATTCCTGGGGTGGCTGCAATTGAGCTCTCCAAGACACCTGGATCCCATGTTGCGGCATTTGTTCCCGAGTCTAAGGGAGTTCCTGCCAGTGTGCAGATATTTTCTTGTGCTAAAGATTCACAAAGTCTTCCTATTGCTCGTCGGAGTTTTTTCCGATGCTCAACTGTGCAATTGAATTGGAATTATGGCTCTACTGGCCTTCTGGTTACTGTGCAATCAGATGTTGATAAAACAAACCAGAGTTACTATGGAGAGTCAAAGCTAAACTACTTGACTACTGATGGAACTCATGAAGGACTTGTACCACTTCGTAAAGAGGGGCCTGTTCACGATGTTCAATGGTCATATAATGGTGCAGAGTTTGCTGTTGTTTATGGGTTCATGCCTGCTAAAGCGACTGTGTTTGACAAGAAGTGCAACCCTCTACTTGAGCTTGGCACTGGTCCTTATAATACTGTCAGATGGAATCCGAAAGGAAAATTTCTTTGTTTGGCTGGTTTTGGGAACTTACCTGGTGACATGGCCTTTTGGGATTACGTGGAGAAAAAACAAATTGGAACTACTAAGGCTGAATGGTCTGTAACCAGTGAATGGTCCCCATGTGGACGCTATTTCATGACTGCCACAACAGCTCCAAGGCTACAAGTCGACAATGGGATAAAAATTTTCCATCACAATGGGTCTTTGTTCTTCAAGAAAATGTTCGACAAGTTGTTTCAGGCTGATTGGAAGTCGGAGTCATCTGATAAATTTGGAGACATCACTGAACTTATAAAGTCTATTGATTCGCTAAAAGTTGAAGAAATTAAACCTCAAGGACAAGGGTCAAAATCTTCACAATCCTCTGCTAAAACTGCTGCTGCCAGTGCCAACCCTCCTGCTCAAAAGCCGGCCGCTTATCGCCCTCCTCATGCAAAAAATGCTGTTGCTGTTCAAGCAGAGCTGTTTGGAGAAGGGCCGAAAGAAGCAATGAGCAAGAATGCATTGAGGAATAAGAAGAAAAGGGAGAAACAGAAGGACAAAAAGGGTGGTGAAGCCACAGGATCTGATGCATGA 1569 43.4 MTYSNPLTFLLTFLSVRGPEGFSSWDGPPFINGQPRIKRENVPCTNAKFSEDGSRLMVTKSDSAISIYDCSTFEEIRSFQISSLIAASLSPCGTFLQTFKKSSTSQERNVALWKTGTGDAVYHQFQKNMTKTTWPSIRFSDDEAVACRMATNEIQFFDALDFSKGVIYRLKIPGVAAIELSKTPGSHVAAFVPESKGVPASVQIFSCAKDSQSLPIARRSFFRCSTVQLNWNYGSTGLLVTVQSDVDKTNQSYYGESKLNYLTTDGTHEGLVPLRKEGPVHDVQWSYNGAEFAVVYGFMPAKATVFDKKCNPLLELGTGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYVEKKQIGTTKAEWSVTSEWSPCGRYFMTATTAPRLQVDNGIKIFHHNGSLFFKKMFDKLFQADWKSESSDKFGDITELIKSIDSLKVEEIKPQGQGSKSSQSSAKTAAASANPPAQKPAAYRPPHAKNAVAVQAELFGEGPKEAMSKNALRNKKKREKQKDKKGGEATGSDA 522
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 5967434 5971169 - Bpe014165.1 Bpe14g00787 115096

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe14g00787 522 PIRSF Transl_init_eIF2A 11 521 IPR011387 GO:0003743|GO:0006413
Bpe14g00787 522 Pfam Eukaryotic translation initiation factor eIF2A 219 412 IPR013979 -
Bpe14g00787 522 Gene3D - 25 193 IPR015943 GO:0005515
Bpe14g00787 522 MobiDBLite consensus disorder prediction 439 522 - -
Bpe14g00787 522 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2A 14 517 IPR011387 GO:0003743|GO:0006413
Bpe14g00787 522 MobiDBLite consensus disorder prediction 443 460 - -
Bpe14g00787 522 SUPERFAMILY DPP6 N-terminal domain-like 42 395 - -
Bpe14g00787 522 Gene3D - 231 422 IPR015943 GO:0005515
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe14g00787 K15026 EIF2A; translation initiation factor 2A - jre:108982788 842.032
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01672 Bpe-Chr2:19368045 Bpe14g00787 Bpe-Chr14:5967434 1.16E-18 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g1319 . . . . . Bpe14g00787 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Bda13g00541 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0012865 1 0 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 28
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe14g00787 Bpe_Chr14 FPKM 2.644068 4.042695 4.439838 5.325589 11.336402 12.275529 11.635521 10.111708 9.969934 9.403181