Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe14g00797 ATGGGAAGAGGGAGAGTGGAGCTGAAGAGGATTGAGAACAAAATCAACAGGCAAGTGACCTTCGCAAAGAGAAGAAATGGACTTTTGAAGAAAGCATATGAGCTTTCCGTTCTTTGCGATGCAGAGGTTGCTCTCATCATCTTCTCCAATAGGGGAAAACTGTACGAGTTTTGCAGTAGTTCAAGCATGCTCAAAACCCTTGAGAGGTACCAAAAGTGCAACTATGGAGCCCCAGAGCCAAGTGTTTCCACTAGAGAAGCCATGGAGTTGAGCAGCCAGCAGGAATATTTGAAGCTTAAAGCACGTTATGATGCTCTACTAAGATCCCAGAGGAACCTTTTGGGTGAAGACCTTGGCCCTCTGGGTAGTAAAGATCTTGAGTCGCTTGAAAGGCAACTGGATTCATCACTCAAACTGATCAGATCGACAAGGACTCAATACATGCTGGATCAACTCAATGATCTTCAACGCAAGGAACACTTGCTGTGCGAAGCAAACAAAACCCTGAAACAAAGACTGATGGAAGGGTATCAAATAAGTTCACTACAGCTAATTCCAAATGAAGAGGAAGTTGTGTATGATCGTCAGCATGCTCAACCTCAGGCAGATGGATTCTTTCATCCCTTAGACTGTGAACCAACTTTGCAAATTGGATATCCGTCTGACCCAATAACAGCAGTCAATGGCGCAGGCCCAAGCCTAAACAATTACATGCCAGTGTGGTTACCATGA 732 44.67 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPSVSTREAMELSSQQEYLKLKARYDALLRSQRNLLGEDLGPLGSKDLESLERQLDSSLKLIRSTRTQYMLDQLNDLQRKEHLLCEANKTLKQRLMEGYQISSLQLIPNEEEVVYDRQHAQPQADGFFHPLDCEPTLQIGYPSDPITAVNGAGPSLNNYMPVWLP 243
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 6020677 6024385 - Bpe014175.1 Bpe14g00797 115106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe14g00797 243 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
Bpe14g00797 243 ProSiteProfiles K-box domain profile. 89 180 IPR002487 GO:0003700|GO:0005634|GO:0006355
Bpe14g00797 243 PANTHER SERUM RESPONSE FACTOR HOMOLOG 1 228 - -
Bpe14g00797 243 PANTHER AGAMOUS-LIKE MADS-BOX PROTEIN AGL9 HOMOLOG 1 228 - -
Bpe14g00797 243 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Bpe14g00797 243 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Bpe14g00797 243 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Bpe14g00797 243 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Bpe14g00797 243 Coils Coil 126 146 - -
Bpe14g00797 243 CDD MADS_MEF2_like 2 76 IPR033896 GO:0000977|GO:0045944
Bpe14g00797 243 Gene3D - 13 97 IPR036879 GO:0003677|GO:0046983
Bpe14g00797 243 ProSitePatterns MADS-box domain signature. 3 57 IPR002100 GO:0003677|GO:0046983
Bpe14g00797 243 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 57 IPR002100 GO:0003677|GO:0046983
Bpe14g00797 243 Pfam K-box region 89 173 IPR002487 GO:0003700|GO:0005634|GO:0006355
Bpe14g00797 243 SUPERFAMILY SRF-like 2 75 IPR036879 GO:0003677|GO:0046983
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe13g00816 Bpe14g00797 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe14g00138 Bpe-Chr14:1858128 Bpe14g00797 Bpe-Chr14:6020677 9.50E-100 dispersed
Bpe14g00797 Bpe-Chr14:6020677 Bpe15g00568 Bpe-Chr15:16692832 1.48E-60 dispersed
Bpe13g00816 Bpe-Chr13:14457272 Bpe14g00797 Bpe-Chr14:6020677 8.38E-163 wgd
Bpe14g00797 Bpe-Chr14:6020677 Bpe04g00881 Bpe-Chr4:5854720 1.64E-137 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22477 PF01486 K-box 4.20E-24 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe14g00797 - - tcc:18608957 419.468