Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe14g00803 ATGGATGTACGTGCTCTTACTCCAGTTTGCCTTGCAAACTCTGCTGATCCCAGTCAAAAGGAGGGTTGGTGGCCAGATGGATCTGAAGATAAAAAAGATTGGAGGAGGATAACTACTACTGACAATGAAATTAGTCGGCGCTGGAGAGAAGAGGAAAGAGAAACTGGATTACTTGGTGGGAGAAGAGATCGTAGGAAAACTGATCGTCGCATTGATAATGTTTCAATCCGAGATGGAACTGAAAGTAGATCCCTGCCCACCTCTGACCGTTGGCATGATGGTCGTAATGCTGGGCATGATGCTCGGCGTGACAGCAAATGGTCATCTAGATGGGGTCCTGAAGAGAAGGACAAAGAATCTCGGACTGAAAAGCGATTAGATGTAGACAAGGATGATAGTCACAATGAGATCCAATCAGTGGGTAACATTCGTTCAATTTCTGAACGTGACTCCGAGTCTCGTGATAAATGGAGGCCTCGCCACAGGATGGAGGTTCATTCAAGCAGCTCCACTTGTCACCGAGCTGCACCAGGATTTGGCCTCGAAAGAGGACGTGTAGAGGGTTCCAATGTCGGGTTTACCATTGGACGAGGAAGGGCAAAGATCATAGGAAGATTATCTGCTGGCCTGATTGGTGCCCCTCATTTGGATAAAAGTGATCATATCCTTGGGAAATCAAATTATTCGGCTCGTACTTTCTGCTACCCTCGGGGGAAGATTCTTGATATTTATCGAAGACAAAAACTGAATCCATGTTTCGTTGCCATGCCAGATGAGATGGAAGAGTCACATGCGATAACTCAGTTAGACATTGTTGAACCATTGGCTTTTATTGCACCAAACGATGTAGAGGAGGCTACTCTTAGTGATATTTGGAAAGGAAAGATCAATAGTAGCGATGTGGTTTATGAATCATATCAAAAAGAGAATTCCCGTAAGCATGTTATAGGAGTAGAGGACTCAAAATTAATTATGGAAGGAAAAAGAGTTCTGCCTCCAACCATCTGCCAAGAGACTGCAGACTCCCTTCAAGATGCTGCCAATGGTTATGCAAATAAAGCTGTTGAAGAAAATACCATGTGGAATTATGGTTTATTAAGGAATGAAATAAATGAAGAGAATATTACTCAAAATAAAGACCAGCATGTAGCACCAGTAGGTTGGTCAGATTCAGATGATTTGGCTGCAATAGTTTTTAGAGATATTGCAGTTCCAAGTGTATTTGAGACAAGTGTTGCTCGCCAAAGTGCTTCACAGACCCATGTTCGTGATAATGGAAAAATGGAAAATTCTGGTTTCGAGGATAATCCGATCAATGACAATGATGTGGCAAATTCGTTTGGCGTCAATCCCAATGTTCCCAATGATTCAAGTTCTCTTTTTATAATGCCCTCTTTAGACCAGAATCAATTCAGAAGCTCTAACGCAAAAAATGTAGTCAAGGAAACCCCACCTGAGAAGTTTAGTTTGTACTACCTTGATCCTCAGGGGATTATACAAGGGCCATTCATAGGGGCAGATATTATCTTGTGGTACGAACAGGGATTTTTTGGGACAAGCCTTCCTGTCCGTCTGGCTGATGCTCCTGAAGGGACTCCTTTTCAAAGTTTAGGGGAGGTCATGCCACATTTAAAAAGTAGTGCCGGATCCACTAATGTTGCTTTATCAAATTCTACTCTTGAGGAAATTAGTGCCCCTTTAAGGAAATCGGAAGCTGGTTTTACTCATCTTCCCATTCCAGAAACTTCTAATCTATCTGGAGTGCATGATCGGATCCTGCCATTGTATGAGATTCATAAACTCCCTCAGCATAGTTCATCCAGAATGGACCAAAGCGGTCATGATTTTGTTGTGCAGGATGAAGAAATTGTATTTCCAGGAAGACCAGGAAGCACTGACTATCCTGTTCCAAGGACTTCTGGGGGAATTCCTTTTGGAAACTCAATAAGTCAACCGTCTTTCTCCAATCAAATTGAGTCTTCCTTACCAAGTCAGAATGATAGCAGGATGCACCCATTTGGTTTAATGTGGTCTGAGCTCGAAAGCGCAAGCTCAAAGCATGTGAAGCCATCTAACATACCAACCAGCACGAGTAGGGTTTCCCAATTAGGTGCCATGACCGATCCATCACTTTCCACAGACATGTGGTTTGATGGTTATAGAAAAAATACTCATTCTGACAGTAGTTTGTTTCAAGATACCATGTCTTCTGGACAACTGGGACTGCTTGAGCAAGATTCTAATTCTTTTGATCTGACGGACCAGCTTATGTCTCACCAATACCACCAACAGCAAAATTTATTTTCCTCTCACATAAATGAATCAATTATTGATCATGCACGGCAAAATCTTATTCAGCAACAGTTGTTGGCTGAACGTTCTCCCACAGATCTGGATCATCTTTTATCTATTAAGCTGCGGCAACAACAACTTCAATTGCAACATCATTTGCAGCAGCAACAACAATTTCAGCAACAGCAGAAGTTCTTGCAGGAGCAACAGCAAAAATTCTTGCAGGAGCAACAGCGGTCTCAAGTCCGTCAAGTGCTCCTTGAGCAGTTTTTGCATGGCCAACGTGAGCCTGGCCCGGGGAAATCACATGTTAATTCAATTGGAGCTAACAATGTTGTTGATCAGGTGATCTTAGAGCAGCAGTTATTAAATGACCTACAACAATGGTCTCATCGAAATTCAAGACATATAGACCCATCTTTCGAGCATTCTATTCACTCGCAATTTGGTCAATTGCCACAACAAGATCATCAAAGTGACTTATTGGAGCTAATATCTCGAGCACAACGGGGGAAAATGCAGTCCTTGGAACAACAAATATTGCAGCAAGAACAGATGCTTCAGCAAGAACAGATGCAGGGTAGGCATTTGTCACTGGGGTTGAGACAGCGAGCCCCTTTGGAAGATGAGAGGCATACTGGTTCTATCTGGCCAGGTGACGAGGCAGGTCAGCAGTTTTTCAGGTCTCATCCTGGCCCTCAAAGAGTTCATTCTGCAAACTTCGATTTATATCACCAACAAAGACCATCTCATGATGAACAGCTGAACCACCTCGAGCGCAATCTTTCATATCAAGATCGTCTTCATCAAGGGCTTTATGAGTCTGGATCTTTTCCATTTGAGAGGTCAATGACTTTGCCTTCTGGTACTTCAGAAATTAATTTGGATGCTGTTAATAGCTTGGCACACCCACATGGTTTAGAGATACTTGAGTCAAGTGTACGGATCTCACCAGGCAATCAATTTGGAACAACTGGAGCTGGTATTGGTGCTCATACTTCTCGCCATAATTTAGTGTCGAATCATTTTCAAGTTCCTTATTTAGATGGAACTGAGAGTCATTGGTCTGAGAACAATGATCAACTCCATCTTAATGCGGAGATGTTAAAGAGGGAGTCAGAATCTAAAATGACTGCTGGAGATCCATCTCTATGGATGTCAGATGGATTAAATGATGAAAAGTCAAAGCGGTTGTTGCTGGATTTGCTCAGTCAAAAATCAGTTCAGGCTGCCGAGTCTTCTAATGTTTCCAATGGAGTATCTTATGATAGGATGGCTGGCGTCTATTCTGGATCAAGCAGTGCAGATCACCCATTCAATCTTTATTCAGACGAAGAAGCTGGTCTAAACATCTCTTTTCATGTGGGATCCTATGGTTCAAATATATGCGAACCATTGCAGGCTCAGCAGCACAGCAGTTTGGGAGGCAAAGAAAAAGTCCCTTATAGATTGGTTTCCGAACCTTGCATTGATGACAATGGTACAGGTGTTAAAACCGGTGACATTATGTACCTACATTCTAACCCAGTTAGTACACTGTCTGTAAACAAAGAGCTTGTAGATGTAGTAGGAGGTAGAGGCCGCGAGAGTTTGATGAAAAATCATACTTTTGATATTCAAGAACGAACACTTGAACTTGGAGGGTTGGTTTCGACAGATCATGGAGGGATTCTTAACAGTGCTCTTGGCAGGCACTCTTCTCTTGGATCTACTGGTAATTTAGTTTTGATTATTTTTTTTGGCCCCTGCTCGCCTTATAGGGTCACTATTCTCTCCAAAGATACTATTTTGTTGAGGCGCCCTCCGGTCCCACGTGCTATGTCATCTCAAGAAGGATTGTCGGAAATCGTTTCTGATTCAGTTAGAGGGAAGAACGATGGAGCAAGATCAAGCCACAGTTCAGATATGTCGATAACATCTGAGAAAAAGGAGATTCGATTTCGACGCACATCATCGGGAAGTGATGTGGACGTGTCGGAGGCATCATTTATTGACATGCTGAAGAAGAGTGCACCCACAGAAGCCCACCCTGCTGCAGCATATACTGAGCCAATGGACGGATCACAAGCGGGGAAAGGAGGGAAGAAGAAAGGAAAGAAGGGGCGGCAAATTGATCCGGCATTGCTAGGCTTCAAAGTCACGAGTAACCGAATAATGATGGGCGAGATACAGCGGGTGGACGATTGA 4479 43.11 MDVRALTPVCLANSADPSQKEGWWPDGSEDKKDWRRITTTDNEISRRWREEERETGLLGGRRDRRKTDRRIDNVSIRDGTESRSLPTSDRWHDGRNAGHDARRDSKWSSRWGPEEKDKESRTEKRLDVDKDDSHNEIQSVGNIRSISERDSESRDKWRPRHRMEVHSSSSTCHRAAPGFGLERGRVEGSNVGFTIGRGRAKIIGRLSAGLIGAPHLDKSDHILGKSNYSARTFCYPRGKILDIYRRQKLNPCFVAMPDEMEESHAITQLDIVEPLAFIAPNDVEEATLSDIWKGKINSSDVVYESYQKENSRKHVIGVEDSKLIMEGKRVLPPTICQETADSLQDAANGYANKAVEENTMWNYGLLRNEINEENITQNKDQHVAPVGWSDSDDLAAIVFRDIAVPSVFETSVARQSASQTHVRDNGKMENSGFEDNPINDNDVANSFGVNPNVPNDSSSLFIMPSLDQNQFRSSNAKNVVKETPPEKFSLYYLDPQGIIQGPFIGADIILWYEQGFFGTSLPVRLADAPEGTPFQSLGEVMPHLKSSAGSTNVALSNSTLEEISAPLRKSEAGFTHLPIPETSNLSGVHDRILPLYEIHKLPQHSSSRMDQSGHDFVVQDEEIVFPGRPGSTDYPVPRTSGGIPFGNSISQPSFSNQIESSLPSQNDSRMHPFGLMWSELESASSKHVKPSNIPTSTSRVSQLGAMTDPSLSTDMWFDGYRKNTHSDSSLFQDTMSSGQLGLLEQDSNSFDLTDQLMSHQYHQQQNLFSSHINESIIDHARQNLIQQQLLAERSPTDLDHLLSIKLRQQQLQLQHHLQQQQQFQQQQKFLQEQQQKFLQEQQRSQVRQVLLEQFLHGQREPGPGKSHVNSIGANNVVDQVILEQQLLNDLQQWSHRNSRHIDPSFEHSIHSQFGQLPQQDHQSDLLELISRAQRGKMQSLEQQILQQEQMLQQEQMQGRHLSLGLRQRAPLEDERHTGSIWPGDEAGQQFFRSHPGPQRVHSANFDLYHQQRPSHDEQLNHLERNLSYQDRLHQGLYESGSFPFERSMTLPSGTSEINLDAVNSLAHPHGLEILESSVRISPGNQFGTTGAGIGAHTSRHNLVSNHFQVPYLDGTESHWSENNDQLHLNAEMLKRESESKMTAGDPSLWMSDGLNDEKSKRLLLDLLSQKSVQAAESSNVSNGVSYDRMAGVYSGSSSADHPFNLYSDEEAGLNISFHVGSYGSNICEPLQAQQHSSLGGKEKVPYRLVSEPCIDDNGTGVKTGDIMYLHSNPVSTLSVNKELVDVVGGRGRESLMKNHTFDIQERTLELGGLVSTDHGGILNSALGRHSSLGSTGNLVLIIFFGPCSPYRVTILSKDTILLRRPPVPRAMSSQEGLSEIVSDSVRGKNDGARSSHSSDMSITSEKKEIRFRRTSSGSDVDVSEASFIDMLKKSAPTEAHPAAAYTEPMDGSQAGKGGKKKGKKGRQIDPALLGFKVTSNRIMMGEIQRVDD 1492
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 6051424 6059789 - Bpe014180.2 Bpe14g00803 115112

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe14g00803 1492 MobiDBLite consensus disorder prediction 23 137 - -
Bpe14g00803 1492 MobiDBLite consensus disorder prediction 1438 1468 - -
Bpe14g00803 1492 Pfam GYF domain 491 537 IPR003169 GO:0005515
Bpe14g00803 1492 Gene3D - 474 562 IPR035445 -
Bpe14g00803 1492 MobiDBLite consensus disorder prediction 1 176 - -
Bpe14g00803 1492 MobiDBLite consensus disorder prediction 147 168 - -
Bpe14g00803 1492 MobiDBLite consensus disorder prediction 1372 1415 - -
Bpe14g00803 1492 PANTHER GYF DOMAIN-CONTAINING PROTEIN 1 1492 - -
Bpe14g00803 1492 ProSiteProfiles GYF domain profile. 487 538 IPR003169 GO:0005515
Bpe14g00803 1492 CDD GYF 488 545 IPR003169 GO:0005515
Bpe14g00803 1492 Coils Coil 806 833 - -
Bpe14g00803 1492 Coils Coil 937 957 - -
Bpe14g00803 1492 MobiDBLite consensus disorder prediction 415 441 - -
Bpe14g00803 1492 MobiDBLite consensus disorder prediction 1400 1415 - -
Bpe14g00803 1492 SUPERFAMILY GYF domain 481 545 IPR035445 -
Bpe14g00803 1492 SMART gyf_5 488 543 IPR003169 GO:0005515
Bpe14g00803 1492 PANTHER GYF DOMAIN-CONTAINING PROTEIN 1 1492 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe14g00803 K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein - qsu:112017475 1329.69
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bpe13g00818 Bpe14g00803 CCT
Bpe13g00818 Bpe14g00803 ECH
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe13g00818 Bpe-Chr13:14481327 Bpe14g00803 Bpe-Chr14:6051424 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g1304 . . . . Bpe13g00818 . . . . . . . . . . . . . . . . . . . Cla06g00177 Cam06g0034 Cec06g0196 Cco06g0191 Clacu06g0193 Cmu06g0187 Cre06g0959 . . . . . . . . Blo02g00198 . . . Bpe14g00803 . . . . . . . . . . . . Bhi12g02418 . . . Hepe03g1143 . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003820 2 2 2 2 2 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 4 1 2 44
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe14g00803 Bpe_Chr14 FPKM 4.057778 3.804139 3.529066 4.540851 14.545631 13.46609 13.180364 4.67813 5.036263 5.653184