Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe14g00808 ATGGCAGACAAACCGGAAGGATCAGTTCATCAGGACCCTCCCCCTCCGCCTTCTTCTTCGCCCAAACGCAGCGTCGAATCACCAGCGCAGTCTGAAGAGGAGACCAAGAAATGGGGGACTCATGTCATGGGTGCTCCCGCCAACCCCACTGCTCATCCCGACAACCAGAAGGCGGCGGTGTGGAACGCCGGTGATCACCACCATCCTTACGTTCAGTACTCCCCCGTGGACCGCCCGACTAATAATCCTTTAGAGCCACTGATTCATTTTTTTAATTCCTGGAGCTCCAAAGCCGAATCCATCGCCCGCAACGTCTGGCACAATCTGAAAACTGGGCCGTCGGTATCGGAAGCGGCGTGGGGAAAGGTGAATCTGACGGCGAAAGCGATGACGGAAGGGGGATTCGATTCGCTTTTCCGGCTGACATTCGGAGCCGATCCGAACGAGAAGCTGAAGAAGACCTTCGCTTGTTACCTCTCGACGTCCACAGGCCCCGTCGCCGGGACGCTCTATTTGTCAACCCTCCGGCTGGCTTTTTGCAGCGATCGTCCATTGCGCTTCACGGCTCCTTCTAGAGAAACTTACTGGAGCTATTACAAGGTGATAATACCACTGGGAGAGACGGCGACGGTTAATCCGGTGACGATGAAGGAAAACCCACCGGAGAAATACATTCAGATCTCGACCAAAGACGGCCATGATTTCTGGTTCATGGGTTTTGTGAGCTTTGAGAAGGCAACTCACCATCTCTTGGACGCTGTTTCTGATTTCAGACCAAATGTAGTTCCTTCAGGCACACGTCCTGCGTAG 810 54.07 MADKPEGSVHQDPPPPPSSSPKRSVESPAQSEEETKKWGTHVMGAPANPTAHPDNQKAAVWNAGDHHHPYVQYSPVDRPTNNPLEPLIHFFNSWSSKAESIARNVWHNLKTGPSVSEAAWGKVNLTAKAMTEGGFDSLFRLTFGADPNEKLKKTFACYLSTSTGPVAGTLYLSTLRLAFCSDRPLRFTAPSRETYWSYYKVIIPLGETATVNPVTMKENPPEKYIQISTKDGHDFWFMGFVSFEKATHHLLDAVSDFRPNVVPSGTRPA 269
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 6081037 6082021 - Bpe014185.1 Bpe14g00808 115117

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe14g00808 269 PANTHER GEM-LIKE PROTEIN 2 20 261 IPR037848 -
Bpe14g00808 269 Pfam GRAM domain 138 251 IPR004182 -
Bpe14g00808 269 CDD PH-GRAM_GEM 148 256 - -
Bpe14g00808 269 Gene3D - 135 255 IPR011993 -
Bpe14g00808 269 PANTHER GEM-LIKE PROTEIN 5 20 261 - -
Bpe14g00808 269 MobiDBLite consensus disorder prediction 1 54 - -
Bpe14g00808 269 SMART gram2001c 137 215 IPR004182 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe14g00808 - - - mnt:21396355 397.512
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bpe13g00825 Bpe14g00808 CCT
Bpe13g00825 Bpe14g00808 ECH
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe10g00288 Bpe-Chr10:10254120 Bpe14g00808 Bpe-Chr14:6081037 2.00E-35 dispersed
Bpe12g00014 Bpe-Chr12:148433 Bpe14g00808 Bpe-Chr14:6081037 1.39E-12 dispersed
Bpe02g01139 Bpe-Chr2:14993730 Bpe14g00808 Bpe-Chr14:6081037 3.23E-60 transposed
Bpe06g00092 Bpe-Chr6:1322329 Bpe14g00808 Bpe-Chr14:6081037 1.42E-52 transposed
Bpe13g00825 Bpe-Chr13:14520272 Bpe14g00808 Bpe-Chr14:6081037 1.93E-155 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g1330 . . . Bda11g00376 Bpe13g00825 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Csa04g00260 . . Blo02g00203 . . Bda11g00376 Bpe14g00808 . . Bma06g01332 . . . . . . . . Cpe03g01197 . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0005307 2 1 2 2 2 1 1 1 1 1 1 1 1 1 1 1 1 3 1 1 1 1 1 1 1 1 1 1 1 3 38
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe14g00808 Bpe_Chr14 FPKM 10.75 9.452182 6.905334 4.858283 8.885659 8.717938 8.042401 5.401203 6.954013 6.170925