Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe14g00819 ATGAGATCCTTTGTTGAAACGAAGGATCCGTCTGCTAAGGAAGTAGATGACTTCATGATTCGGAGATTTCTTCGGGCTCGCGACCTCGACATCGATAAGGCTTCTACTATGTTTCTGAACTACCTAAGCTGGAAGCGCAAATTTCTTCCTAAGGGTTTTATATCTGAGTCAGAGATTTCAGAGGAAATTTCCCATAACAAGATGTTCATGCATGGCCTGGATAAAAAGGGACATCCCATTGCAGTGGTCTTTGGAGCTAGGCACAAACAAGGAAGTTTAGAAGAGTTCAAGAGATTTGCTATCTATAGTCTTGAGAAAATATGTGCCAGAATTCCCAGAGGGCAGGAAAAGTTTGTGTGCATAGCTGATCTTCAAGGATGGGGATATTCCAATTGTGACATTCGCGGATACAAAGCATCTCTGTCAATCTTGCAGGATTGCTACCCAGAGAGGCTGGCCAAGTTGTATATCATCCACGTGCCTTACATATTCATGACGGCATGGAAGATGATTTACCCGTTCATTGACAAGAAAACAAAAAAGAAGATAATTTTTGTTGAAAACAAAAAGCTCAGATCCACCTTGCTCAATGACATTGATGAGAATCAGCTCCCTCGTATTTATGGAGGCAAAATGGAGTTGGTTCCCATTCAAAGCTGCTGA 663 41.93 MRSFVETKDPSAKEVDDFMIRRFLRARDLDIDKASTMFLNYLSWKRKFLPKGFISESEISEEISHNKMFMHGLDKKGHPIAVVFGARHKQGSLEEFKRFAIYSLEKICARIPRGQEKFVCIADLQGWGYSNCDIRGYKASLSILQDCYPERLAKLYIIHVPYIFMTAWKMIYPFIDKKTKKKIIFVENKKLRSTLLNDIDENQLPRIYGGKMELVPIQSC 220
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 6193762 6195704 - Bpe014196.1 Bpe14g00819 115128

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe14g00819 220 SMART sec14_4 62 213 IPR001251 -
Bpe14g00819 220 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 1 220 - -
Bpe14g00819 220 PANTHER OS03G0850700 PROTEIN 1 220 - -
Bpe14g00819 220 Gene3D - 3 218 IPR036865 -
Bpe14g00819 220 SUPERFAMILY CRAL/TRIO domain 57 213 IPR036865 -
Bpe14g00819 220 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 56 216 IPR001251 -
Bpe14g00819 220 CDD SEC14 69 211 IPR001251 -
Bpe14g00819 220 SMART CRAL_TRIO_N_2 16 41 IPR011074 -
Bpe14g00819 220 Pfam CRAL/TRIO domain 65 210 IPR001251 -
Bpe14g00819 220 SUPERFAMILY CRAL/TRIO N-terminal domain 2 52 IPR036273 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe14g00819 - - - qsu:111985042 341.658
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bpe13g00832 Bpe14g00819 CCT
Bpe13g00832 Bpe14g00819 ECH
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe10g01002 Bpe-Chr10:15430867 Bpe14g00819 Bpe-Chr14:6193762 6.58E-36 dispersed
Bpe14g00819 Bpe-Chr14:6193762 Bpe11g01574 Bpe-Chr11:11799157 4.56E-20 dispersed
Bpe15g00643 Bpe-Chr15:17216700 Bpe14g00819 Bpe-Chr14:6193762 3.92E-15 dispersed
Bpe13g00832 Bpe-Chr13:14586203 Bpe14g00819 Bpe-Chr14:6193762 2.19E-115 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g1356 . . . . Bpe13g00832 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Blo02g00211 . . . Bpe14g00819 . . Bma06g01325 . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007871 1 1 1 1 2 1 2 1 1 1 1 1 2 1 1 2 1 1 2 1 1 1 1 1 1 1 1 1 1 2 36
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe14g00819 Bpe_Chr14 FPKM 7.014688 6.159893 4.221979 5.074901 2.698467 3.184722 2.660753 0.864883 0.840195 0.715975