Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe14g00841 ATGGGTGGTGAAGGAAAGTTGTTCTCCTTGCGAGAAGTCTCCGAGCACAACACGCCCAAGGACTGCTGGCTAATCATCAATGGCAAAGTGTATAATGTGACCAACTTCTTGGAAGACCATCCCGGCGGCGATGAAGTTCTGTTATCTGCTACAGGAAAGGACGCAACTGATGATTTTGAAGATGTTGGTCACAGTGACAGTGCAAGAGAAATGATGAGCAAATACTATGTTGGTGAGATAGATTCTTCGACTATTCCAAAAAAAACAACATATATTCCTCCAAAACAGCCTCACAACAATCAGGATAAGACATCTGAATTCATTGTCAAGCTCCTCCAATTCCTCGATTGGCTGTCGGAGTTCGCTTCTACACAAAATAAAGCTGAGGTTCTGACTTTTATGATGGTAGATTATTGGTTTTTCATTTAA 429 41.72 MGGEGKLFSLREVSEHNTPKDCWLIINGKVYNVTNFLEDHPGGDEVLLSATGKDATDDFEDVGHSDSAREMMSKYYVGEIDSSTIPKKTTYIPPKQPHNNQDKTSEFIVKLLQFLDWLSEFASTQNKAEVLTFMMVDYWFFI 142
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 6314134 6316049 - Bpe014217.1 Bpe14g00841 115150

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe14g00841 142 Gene3D - 3 86 IPR036400 -
Bpe14g00841 142 Pfam Cytochrome b5-like Heme/Steroid binding domain 10 80 IPR001199 -
Bpe14g00841 142 PRINTS Cytochrome B5 signature 68 80 IPR001199 -
Bpe14g00841 142 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Bpe14g00841 142 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Bpe14g00841 142 PRINTS Cytochrome B5 signature 55 62 IPR001199 -
Bpe14g00841 142 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 5 92 IPR036400 -
Bpe14g00841 142 PANTHER CYTOCHROME B5 1 116 - -
Bpe14g00841 142 SMART Cyt_b5_2 8 81 IPR001199 -
Bpe14g00841 142 PANTHER BNAC04G43300D PROTEIN 1 116 - -
Bpe14g00841 142 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037
Bpe14g00841 142 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe14g00841 K23490 CYB5; cytochrome b5 - qsu:112039863 217.238
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00947 Bpe-Chr3:29081917 Bpe14g00841 Bpe-Chr14:6314134 6.92E-43 dispersed
Bpe04g00930 Bpe-Chr4:6229668 Bpe14g00841 Bpe-Chr14:6314134 1.19E-14 dispersed
Bpe05g01006 Bpe-Chr5:22778730 Bpe14g00841 Bpe-Chr14:6314134 3.27E-14 dispersed
Bpe09g00396 Bpe-Chr9:5950730 Bpe14g00841 Bpe-Chr14:6314134 2.11E-06 dispersed
Bpe13g01364 Bpe-Chr13:18880415 Bpe14g00841 Bpe-Chr14:6314134 1.55E-34 dispersed
Bpe14g00841 Bpe-Chr14:6314134 Bpe14g00928 Bpe-Chr14:6926252 8.26E-47 dispersed
Bpe13g00852 Bpe-Chr13:14727354 Bpe14g00841 Bpe-Chr14:6314134 1.09E-74 wgd
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Bpe13g00852 . 1 134 NADPH P450 reductases AT5G53560 69.4 1.5e-52 202.2
Bpe14g00841 . 1 115 NADPH P450 reductases AT5G53560 68.7 3.3e-44 174.5
Bpe14g00928 . 1 137 NADPH P450 reductases AT5G53560 52.6 1.4e-37 152.5
Bpe13g00852 . 1 134 NADPH P450 reductases AT5G48810 63.2 1.6e-49 192.2
Bpe03g00947 . 1 138 NADPH P450 reductases AT5G48810 57.0 9.5e-42 166.4
Bpe14g00841 . 1 115 NADPH P450 reductases AT5G48810 61.5 4.7e-41 164.1
Bpe13g00852 . 22 133 NADPH P450 reductases AT2G32720 81.3 4.5e-49 190.7
Bpe14g00841 . 22 115 NADPH P450 reductases AT2G32720 79.8 2.5e-39 158.3
Bpe13g01364 . 1 128 NADPH P450 reductases AT1G26340 60.4 2.0e-41 165.2
Bpe04g01356 BCT 2 281 NADPH P450 reductases AT5G17770 80.7 4.0e-132 467.6
Bpe03g01064 BCT 2 281 NADPH P450 reductases AT5G17770 80.7 5.2e-132 467.2
Bpe08g00318 . 7 302 NADPH P450 reductases AT5G17770 68.6 5.8e-115 410.6
Bpe13g00852 . 1 134 NADPH P450 reductases AT5G53560 69.4 1.5e-52 202.2
Bpe14g00841 . 1 115 NADPH P450 reductases AT5G53560 68.7 3.3e-44 174.5
Bpe14g00928 . 1 137 NADPH P450 reductases AT5G53560 52.6 1.4e-37 152.5
Bpe13g00852 . 1 134 NADPH P450 reductases AT5G48810 63.2 1.6e-49 192.2
Bpe03g00947 . 1 138 NADPH P450 reductases AT5G48810 57.0 9.5e-42 166.4
Bpe14g00841 . 1 115 NADPH P450 reductases AT5G48810 61.5 4.7e-41 164.1
Bpe13g00852 . 22 133 NADPH P450 reductases AT2G32720 81.3 4.5e-49 190.7
Bpe14g00841 . 22 115 NADPH P450 reductases AT2G32720 79.8 2.5e-39 158.3
Bpe13g01364 . 1 128 NADPH P450 reductases AT1G26340 60.4 2.0e-41 165.2
Bpe04g01356 BCT 2 281 NADPH P450 reductases AT5G17770 80.7 4.0e-132 467.6
Bpe03g01064 BCT 2 281 NADPH P450 reductases AT5G17770 80.7 5.2e-132 467.2
Bpe08g00318 . 7 302 NADPH P450 reductases AT5G17770 68.6 5.8e-115 410.6
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000252 4 9 3 5 3 5 9 4 4 3 4 4 8 5 5 9 5 6 9 4 5 4 5 5 4 4 4 10 5 2 156
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe14g00841 Bpe_Chr14 FPKM 1.534091 1.201117 1039.517944 1037.543823 0.587503 0.527453 1.113453 0.0 0.196482 0.0