Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe14g00842 ATGGAGAAAGAAGAGAATTACCCGGTTCCACCGATGGCGACGAGTTTTACGGATTTAGAATACAATAATCTAGATCATCTCCACAACGATAATCAACAACCACAGCACCATCATCAACAGCATCAAATTTCTTCTGGGTTTTACGGAGGATCGACTTCCATGGATAAAGTAAGCTTCGCAGAGGTGATGCAGTTCGCAGATTTTGGACCAAAATTAGGTTTAACACAAAACAAGATAGTTGAAGAGTATCAATCAGGAATGGATCCGATATACTTCCTCAAATTCCCCGTCTTAAACGATAAAGTAGATGATCAATCTCTTATGGCTTCAAGAGAGGAAGAAACCGACGAGAGGTTTCGAGAGATGGGTATGGCGGATAGGGTTAGAGTATTTGGTGAAGAAGAAGAGTTTTTCCGGCGAGAAAATTCAGACCCTTCTTCAGTTCAGCTTCGAATTCTTGAAGAAGACATGCAGATTAACAATAACCCATTAACAGAAGGGAAGAACAAGAGGAAAAGGCCGAGAACGATCAAAACTAGTGAAGAAGTTGAAAGCCAGAGAATGACGCATATTGCAGTGGAGAGAAATAGAAGAAAGCAAATGAATGAACATCTTCGAGTTTTGAGGTCTCTCATGCCCGGCTCCTACGTTCAAAGGGGAGACCAAGCTTCAATAATCGGAGGAGCAATTGAGTTCGTCAGAGAATTGGAACAACTTCTTCAATGCTTAGAGTCGCAGAAAAGGAGGAGAATCATGGGAGAAGCTCCGAGACAAATAGGCGAATCATCCACAGTCGGAATACAGCAAAATCAACCTCCATTTTTCCCTCCGCTGCCTCTTCCAAACGAACAGCCGAAGATCATGGACTTCGAGACCGGCCTCCGGGAAGAAACCGCCGAGAACAAGTCTGGATTAGCTGACGTGGAAGTGAAGCTTTTAGGGTTTGATGCGATGATCAAAATCCTATCGAGAAGAAGACCAGGCCAGCTCATTAAGACCATTGCTGCTCTCGAAGATTTGCAGCTAAATATTCTTCACACCAACATCACAACCATCGAACAAACAGTTCTTTATTCATTCAACGTCAAGGTTGCAGGTGAATCGAGATTCTCAGCTCAAGACATCGCTACCTCAGTTCAACAGATTTTTAGTTTTATTAATGCAAACAATGCTTGA 1176 42.77 MEKEENYPVPPMATSFTDLEYNNLDHLHNDNQQPQHHHQQHQISSGFYGGSTSMDKVSFAEVMQFADFGPKLGLTQNKIVEEYQSGMDPIYFLKFPVLNDKVDDQSLMASREEETDERFREMGMADRVRVFGEEEEFFRRENSDPSSVQLRILEEDMQINNNPLTEGKNKRKRPRTIKTSEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQKRRRIMGEAPRQIGESSTVGIQQNQPPFFPPLPLPNEQPKIMDFETGLREETAENKSGLADVEVKLLGFDAMIKILSRRRPGQLIKTIAALEDLQLNILHTNITTIEQTVLYSFNVKVAGESRFSAQDIATSVQQIFSFINANNA 391
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 6318173 6319647 + Bpe014218.1 Bpe14g00842 115151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe14g00842 391 CDD bHLH_AtFAMA_like 188 259 - -
Bpe14g00842 391 ProSiteProfiles ACT domain profile. 318 391 IPR002912 -
Bpe14g00842 391 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 185 252 IPR036638 GO:0046983
Bpe14g00842 391 SMART finulus 191 242 IPR011598 GO:0046983
Bpe14g00842 391 PANTHER TRANSCRIPTION FACTOR FAMA 22 390 - -
Bpe14g00842 391 Pfam Helix-loop-helix DNA-binding domain 186 237 IPR011598 GO:0046983
Bpe14g00842 391 Gene3D - 177 250 IPR036638 GO:0046983
Bpe14g00842 391 CDD ACT_UUR-ACR-like 318 362 - -
Bpe14g00842 391 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 185 236 IPR011598 GO:0046983
Bpe14g00842 391 PANTHER TRANSCRIPTION FACTOR FAMA 22 390 IPR044283 GO:0003700|GO:0010052
Bpe14g00842 391 MobiDBLite consensus disorder prediction 25 47 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe13g00803 Bpe14g00842 CCT
Bpe13g00803 Bpe14g00842 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe13g00621 Bpe-Chr13:13181067 Bpe14g00842 Bpe-Chr14:6318173 4.00E-51 dispersed
Bpe13g00803 Bpe-Chr13:14375415 Bpe14g00842 Bpe-Chr14:6318173 6.39E-65 dispersed
Bpe14g00778 Bpe-Chr14:5923313 Bpe14g00842 Bpe-Chr14:6318173 1.98E-49 dispersed
Bpe14g00842 Bpe-Chr14:6318173 Bpe11g00336 Bpe-Chr11:2441302 1.51E-13 dispersed
Bpe14g00842 Bpe-Chr14:6318173 Bpe12g00372 Bpe-Chr12:8995190 2.33E-48 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22484 PF00010 HLH 8.10E-10 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe14g00842 - - qsu:112039857 474.552