Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe14g00850 CTTCTGGACGAGATGGATGGAGGCGGGAGCGGTGGTCCTGCGCCGTTTCTGTTGAAGACGTATGACATGGTGGATGACTCAGCCACGGATGAGATTGTGTCGTGGAGCTCGTCGAAGAATAGCTTCGTCGTGTGGAATCCACCGGAGTTCGCTCGGCTTCTTCTTCCGACTTATTTCAAACACAACAACTTCTCCAGCTTTATTCGGCAGCTCAACACATATGGTTTTCGAAAGATTGATCCTGAGAAGTGGGAATTTGCCAATGATGACTTTTTGAAAGATCAGAAACATCTCCTGAAAAATATCCATAGAAGAAAACCTATTCATAGCCACAGTCTTTCTCAAGGTTCTTTAGTGGATCCAGAAAGAGCTGCTTTTGAGGAAGAAATAGAGAGGCTTTCACGGGAAAAAGCTATACTTGAGGCAAATTTACTAAAATTAAAACACCATCAGGCTGAGAAGCTTCAGTTAGAAAACATAGCCAAGAAAATTGAAGGTATGGAAAAAAGGCAGGAAAATTTGCTGATCTTTTTGAAAAAGGCTGTTCAGAATCCTTCCTTTGTTGAACAGCTAGCTCGGAAAGTTGAGTCCATGGACTTCTCATCATACAATAAGAAAAGACGACTGCCTGAAGTTGATCACATACAGCCAGTCATAAAAAATAACTTTATGGACAATTACAGTGGTTCCCGATCTGAGTTGGGGAATATGTTCCAGCAAGATTTCTCAAATAAGCTGAGATTAGAATTATCACCTGCTGTTTCAGATGGTAATTTGGTTTCATGTAGCACACAGAGTTCAATTGATGAAGGTGGAAGTCCTCAAAGAAACATGTCTGAAGAAGAATATAGAAGCGCACCAGCTGGAGCAGAAAGTCTTTATCTCACCACGGAGACATTAGATCTTTCAGATACTGGGACATCATTTACTTTGAACATGGATTTATCTTCACAACGAAATGCATCAAGGAAAGGAAACCCAAAACTTTACACCTTGCAGGAAAGTGGAACTTCGATTGAAGATGGTGACAGTAATATTTCGTGTCATTTGAATCTTACTTTGGCATCTTCTCCCTTGCAATTCAATATCAGTTCTATTTCAGCTAGGATACCCCAACTCAGTTATGAAATTGGCAAATCCCCTGAATCTGTTCTCAACTCCAGTAGTAAAGAATTTGATAATATTTCCTGCAAAAACGGTAACATTGTCGATGAGGAAAAAACAAATTCTCCTTGTCAAGATCCCCATCGTGACAGTCCAGAGACCCCCCCTGCTCCAGTTAGAGTAAATGATGTTTTCTGGGAACAGTTTCTGACTGAAAGACCCGGCTGTTCAGAAAATGAAGAGGCGAGTTCTAATAATAAGGCGAACCCATATAATGAGCTGGACAGTGGAAGGTCTGGCCATGGAATATACAAAAACACCAAGAGCATTGACGAATTATCTCTATGA 1452 40.98 LLDEMDGGGSGGPAPFLLKTYDMVDDSATDEIVSWSSSKNSFVVWNPPEFARLLLPTYFKHNNFSSFIRQLNTYGFRKIDPEKWEFANDDFLKDQKHLLKNIHRRKPIHSHSLSQGSLVDPERAAFEEEIERLSREKAILEANLLKLKHHQAEKLQLENIAKKIEGMEKRQENLLIFLKKAVQNPSFVEQLARKVESMDFSSYNKKRRLPEVDHIQPVIKNNFMDNYSGSRSELGNMFQQDFSNKLRLELSPAVSDGNLVSCSTQSSIDEGGSPQRNMSEEEYRSAPAGAESLYLTTETLDLSDTGTSFTLNMDLSSQRNASRKGNPKLYTLQESGTSIEDGDSNISCHLNLTLASSPLQFNISSISARIPQLSYEIGKSPESVLNSSSKEFDNISCKNGNIVDEEKTNSPCQDPHRDSPETPPAPVRVNDVFWEQFLTERPGCSENEEASSNNKANPYNELDSGRSGHGIYKNTKSIDELSL 483
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 6354011 6356039 + Bpe014226.1 Bpe14g00850 115159

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe14g00850 483 ProSitePatterns HSF-type DNA-binding domain signature. 55 79 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bpe14g00850 483 MobiDBLite consensus disorder prediction 397 427 - -
Bpe14g00850 483 MobiDBLite consensus disorder prediction 445 461 - -
Bpe14g00850 483 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 8 478 IPR027725 -
Bpe14g00850 483 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-5 8 478 - -
Bpe14g00850 483 Coils Coil 123 170 - -
Bpe14g00850 483 MobiDBLite consensus disorder prediction 443 483 - -
Bpe14g00850 483 Pfam HSF-type DNA-binding 16 105 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bpe14g00850 483 Gene3D - 11 106 IPR036388 -
Bpe14g00850 483 SUPERFAMILY Winged helix DNA-binding domain 12 105 IPR036390 -
Bpe14g00850 483 SMART hsfneu3 12 105 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bpe14g00850 483 PRINTS Heat shock factor (HSF) domain signature 67 79 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bpe14g00850 483 PRINTS Heat shock factor (HSF) domain signature 16 39 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bpe14g00850 483 PRINTS Heat shock factor (HSF) domain signature 54 66 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bpe14g00850 483 MobiDBLite consensus disorder prediction 261 280 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe14g00850 K09419 HSFF; heat shock transcription factor, other eukaryote - pvy:116110051 602.438
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01074 Bpe-Chr2:13551694 Bpe14g00850 Bpe-Chr14:6354011 1.11E-62 dispersed
Bpe05g00026 Bpe-Chr5:529330 Bpe14g00850 Bpe-Chr14:6354011 4.62E-41 dispersed
Bpe07g00232 Bpe-Chr7:1653079 Bpe14g00850 Bpe-Chr14:6354011 9.16E-67 dispersed
Bpe08g00470 Bpe-Chr8:3044635 Bpe14g00850 Bpe-Chr14:6354011 7.07E-42 dispersed
Bpe13g01250 Bpe-Chr13:17744672 Bpe14g00850 Bpe-Chr14:6354011 7.10E-56 dispersed
Bpe14g00264 Bpe-Chr14:2729979 Bpe14g00850 Bpe-Chr14:6354011 2.85E-56 dispersed
Bpe14g00850 Bpe-Chr14:6354011 Bpe05g00521 Bpe-Chr5:19390537 1.45E-67 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g916 . . . . . Bpe14g00850 . . . . Cma06g01196 Cma14g01914 . Car14g01712 Sed12g0352 Cpe08g00417 Cpe03g01613 Bhi01g00185 Tan10g0484 Cmetu06g1519 . . . Lcy11g1801 . . . . . . . . . . . Lsi05g01869 . . Cme06g00359 . . . Bda13g00480 . . Bma02g01198 . . Cmo06g01233 Cmo14g01968 . . . . . . . . . . . . . Cla05g00322 Cam05g0353 Cec05g0355 Cco05g0358 . Cmu05g0334 Cre05g0397 . Csa03g01069 Chy06g00340 .
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Bpe06g00451 . 38 238 HSF AT4G17750 53.7 1.7e-56 217.2
Bpe14g00264 . 39 225 HSF AT4G17750 54.7 1.3e-53 207.6
Bpe14g00850 . 13 211 HSF AT4G17750 52.3 8.5e-53 204.9
Bpe02g00432 BCT,CCT 20 118 HSF AT4G17750 71.7 1.6e-38 157.5
Bpe05g00026 CCT 14 117 HSF AT4G17750 67.6 2.2e-37 153.7
Bpe04g00177 BCT,CCT 21 118 HSF AT4G17750 68.4 5.0e-37 152.5
Bpe05g00633 . 20 115 HSF AT4G17750 70.8 6.5e-37 152.1
Bpe07g00232 . 22 325 HSF AT5G16820 64.1 2.0e-91 333.2
Bpe05g00521 . 19 320 HSF AT5G16820 63.9 5.9e-91 331.6
Bpe06g00451 . 39 244 HSF AT5G16820 54.0 9.4e-57 218.0
Bpe14g00850 . 15 210 HSF AT5G16820 53.1 1.3e-53 207.6
Bpe14g00264 . 40 225 HSF AT5G16820 52.9 2.0e-51 200.3
Bpe05g00882 . 37 235 HSF AT5G16820 51.9 3.6e-48 189.5
Bpe07g00232 . 24 508 HSF AT1G32330 52.3 4.6e-112 401.7
Bpe05g00521 . 21 504 HSF AT1G32330 50.5 2.6e-107 386.0
Bpe14g00850 . 10 190 HSF AT1G32330 51.8 3.6e-48 189.5
Bpe02g00432 BCT,CCT 18 117 HSF AT1G32330 70.0 7.5e-38 155.2
Bpe04g00177 BCT,CCT 19 118 HSF AT1G32330 67.0 8.3e-37 151.8
Bpe05g00026 CCT 20 116 HSF AT1G32330 70.4 2.4e-36 150.2
Bpe06g00451 . 39 243 HSF AT3G02990 53.8 2.2e-58 223.4
Bpe14g00850 . 15 213 HSF AT3G02990 52.6 9.5e-54 208.0
Bpe14g00264 . 40 226 HSF AT3G02990 51.8 3.1e-52 203.0
Bpe02g00432 BCT,CCT 8 133 HSF AT3G02990 58.9 5.6e-38 155.6
Bpe02g01074 . 7 395 HSF AT4G18880 50.4 1.5e-95 346.7
Bpe14g00850 . 7 483 HSF AT4G13980 52.6 8.7e-124 440.7
Bpe14g00264 . 32 232 HSF AT3G22830 54.3 2.0e-60 229.9
Bpe05g00521 . 10 232 HSF AT3G22830 55.7 5.0e-59 225.3
Bpe07g00232 . 28 236 HSF AT3G22830 55.1 1.6e-57 220.3
Bpe06g00451 . 26 314 HSF AT3G51910 52.2 1.1e-67 253.4
Bpe13g01250 CCT 1 208 HSF AT3G51910 51.2 6.3e-50 194.5
Bpe14g00264 . 32 232 HSF AT3G51910 52.0 9.1e-49 190.7
Bpe05g00521 . 21 218 HSF AT3G51910 51.7 2.5e-46 182.6
Bpe13g01250 CCT 4 210 HSF AT5G54070 51.9 8.2e-52 201.1
Bpe02g02194 CCT 4 210 HSF AT5G54070 51.0 1.3e-49 193.7
Bpe07g00947 . 14 139 HSF AT4G36990 57.1 5.2e-39 158.3
Bpe05g00633 . 16 316 HSF AT4G11660 52.9 2.1e-80 296.2
Bpe02g00432 BCT,CCT 16 119 HSF AT4G11660 76.0 1.3e-45 180.6
Bpe05g00026 CCT 16 121 HSF AT4G11660 72.9 1.2e-43 174.1
Bpe04g00177 BCT,CCT 17 116 HSF AT4G11660 73.0 1.8e-42 170.2
Bpe02g00432 BCT,CCT 1 343 HSF AT1G46264 54.6 1.1e-91 333.6
Bpe04g00177 BCT,CCT 2 334 HSF AT1G46264 52.6 9.8e-88 320.5
Bpe05g00026 CCT 1 340 HSF AT1G46264 52.7 1.1e-86 317.0
Bpe07g00947 . 17 115 HSF AT1G46264 72.7 8.1e-42 167.9
Bpe14g00850 . 5 106 HSF AT1G46264 67.6 2.4e-38 156.4
Bpe05g00882 . 33 131 HSF AT1G46264 69.7 2.1e-37 153.3
Bpe13g01307 . 9 182 HSF AT3G24520 64.4 6.9e-59 224.6
Bpe08g00470 . 7 167 HSF AT3G24520 60.2 3.4e-50 195.7
Bpe06g00451 . 38 238 HSF AT4G17750 53.7 1.7e-56 217.2
Bpe14g00264 . 39 225 HSF AT4G17750 54.7 1.3e-53 207.6
Bpe14g00850 . 13 211 HSF AT4G17750 52.3 8.5e-53 204.9
Bpe02g00432 BCT,CCT 20 118 HSF AT4G17750 71.7 1.6e-38 157.5
Bpe05g00026 CCT 14 117 HSF AT4G17750 67.6 2.2e-37 153.7
Bpe04g00177 BCT,CCT 21 118 HSF AT4G17750 68.4 5.0e-37 152.5
Bpe05g00633 . 20 115 HSF AT4G17750 70.8 6.5e-37 152.1
Bpe07g00232 . 22 325 HSF AT5G16820 64.1 2.0e-91 333.2
Bpe05g00521 . 19 320 HSF AT5G16820 63.9 5.9e-91 331.6
Bpe06g00451 . 39 244 HSF AT5G16820 54.0 9.4e-57 218.0
Bpe14g00850 . 15 210 HSF AT5G16820 53.1 1.3e-53 207.6
Bpe14g00264 . 40 225 HSF AT5G16820 52.9 2.0e-51 200.3
Bpe05g00882 . 37 235 HSF AT5G16820 51.9 3.6e-48 189.5
Bpe07g00232 . 24 508 HSF AT1G32330 52.3 4.6e-112 401.7
Bpe05g00521 . 21 504 HSF AT1G32330 50.5 2.6e-107 386.0
Bpe14g00850 . 10 190 HSF AT1G32330 51.8 3.6e-48 189.5
Bpe02g00432 BCT,CCT 18 117 HSF AT1G32330 70.0 7.5e-38 155.2
Bpe04g00177 BCT,CCT 19 118 HSF AT1G32330 67.0 8.3e-37 151.8
Bpe05g00026 CCT 20 116 HSF AT1G32330 70.4 2.4e-36 150.2
Bpe06g00451 . 39 243 HSF AT3G02990 53.8 2.2e-58 223.4
Bpe14g00850 . 15 213 HSF AT3G02990 52.6 9.5e-54 208.0
Bpe14g00264 . 40 226 HSF AT3G02990 51.8 3.1e-52 203.0
Bpe02g00432 BCT,CCT 8 133 HSF AT3G02990 58.9 5.6e-38 155.6
Bpe02g01074 . 7 395 HSF AT4G18880 50.4 1.5e-95 346.7
Bpe14g00850 . 7 483 HSF AT4G13980 52.6 8.7e-124 440.7
Bpe14g00264 . 32 232 HSF AT3G22830 54.3 2.0e-60 229.9
Bpe05g00521 . 10 232 HSF AT3G22830 55.7 5.0e-59 225.3
Bpe07g00232 . 28 236 HSF AT3G22830 55.1 1.6e-57 220.3
Bpe06g00451 . 26 314 HSF AT3G51910 52.2 1.1e-67 253.4
Bpe13g01250 CCT 1 208 HSF AT3G51910 51.2 6.3e-50 194.5
Bpe14g00264 . 32 232 HSF AT3G51910 52.0 9.1e-49 190.7
Bpe05g00521 . 21 218 HSF AT3G51910 51.7 2.5e-46 182.6
Bpe13g01250 CCT 4 210 HSF AT5G54070 51.9 8.2e-52 201.1
Bpe02g02194 CCT 4 210 HSF AT5G54070 51.0 1.3e-49 193.7
Bpe07g00947 . 14 139 HSF AT4G36990 57.1 5.2e-39 158.3
Bpe05g00633 . 16 316 HSF AT4G11660 52.9 2.1e-80 296.2
Bpe02g00432 BCT,CCT 16 119 HSF AT4G11660 76.0 1.3e-45 180.6
Bpe05g00026 CCT 16 121 HSF AT4G11660 72.9 1.2e-43 174.1
Bpe04g00177 BCT,CCT 17 116 HSF AT4G11660 73.0 1.8e-42 170.2
Bpe02g00432 BCT,CCT 1 343 HSF AT1G46264 54.6 1.1e-91 333.6
Bpe04g00177 BCT,CCT 2 334 HSF AT1G46264 52.6 9.8e-88 320.5
Bpe05g00026 CCT 1 340 HSF AT1G46264 52.7 1.1e-86 317.0
Bpe07g00947 . 17 115 HSF AT1G46264 72.7 8.1e-42 167.9
Bpe14g00850 . 5 106 HSF AT1G46264 67.6 2.4e-38 156.4
Bpe05g00882 . 33 131 HSF AT1G46264 69.7 2.1e-37 153.3
Bpe13g01307 . 9 182 HSF AT3G24520 64.4 6.9e-59 224.6
Bpe08g00470 . 7 167 HSF AT3G24520 60.2 3.4e-50 195.7
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0009917 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 1 1 0 33
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22486 PF00447 HSF_DNA-bind 3.10E-31 CL0123 Bpe TF
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe14g00850 Bpe_Chr14 FPKM 9.608696 9.602428 30.617723 31.877689 33.35891 34.13459 33.566864 16.038132 18.377449 19.290615