Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe14g00858 ATGGGTTCTGTAGGAAACTCAAATCCATGGTTTCCATACCAGTCATACAGAGACTGTTCCCAAGGATTCTGCTCCATATACTGTCCCCAATGGTGCTATATTATCTTCCCTCCTCCTCCACCTTTCGCCGTTGGAGACAGCTCAAACTCCTCCCCGTTTGATTTCTCTCCTCTCATAGTAGCAGTCATCGGAATCCTAGCATCTGCTTTCATTATCATAGGCTACTTCACCTTCATCTCCAAATACTTCCGGCGAACCACCGGCAACAACAACGGGAACGGAGCTGCTGATTCAGATGACCAAATAAGCTCAGAATCATATCAGGCTTCTTCGTCATCGGGGCTGGACGAGGCTCTGATCAAGTCCATAACAGTTTGGAAGTACAAAAAAAATGATGGGTTTGTTGAAGAAACTGATCATTGCTCTGTTTGTCTCTCTGAGTTTCAAGAAAATGAAAGCCTGAGGATTTTGCCGAAATGCAGCCACCCTTTTCACCAACCATGTATAGACACCTGGCTGATGTCTAATTCTAGCTGTCCCCTGTGTCGTTCTACGATCTTACCCACTAATATTTCGCCTATTTCTGCTCAACCAACTCAGCCATCTGGTTTGAATTTGTCTGCACTTGATTCCCAGTCCAGAATCAACAATCAGACTGTTTTAATGGTTCAGAATTTCCAGGAAGCCATTGTTGTTGAAGCTGGAGGTAACGGCTCTCCTAAGCATAACAGAGGGAGAGTTTCTGCAGAAAGACAGAGCTCAGAGCAAAGAGAAAGCATAATTGAAATTAGAGAAGATGGGTTCCAGTTGCAGCCATTTAGGAGGTCTGTTTCAATGACTTCTTGTTCGTATCCAGCCCATGCTTCTGTTGATGACATTTTCAGAGCTACCTACAATGGCGAAAGAGTAGAAGAGGAAGAACGAAGAAACTTACAAATGGGGATAGGGTCCTCAAGGGGAATTGACAAAGAAGATGGAAGATTTGATAACAAAAGGGGAGATCTAAATTTGGCTATGAAGAGATGTATCTCAGCTGGGAGAATATTGTTTACCAAGGAATAA 1062 43.6 MGSVGNSNPWFPYQSYRDCSQGFCSIYCPQWCYIIFPPPPPFAVGDSSNSSPFDFSPLIVAVIGILASAFIIIGYFTFISKYFRRTTGNNNGNGAADSDDQISSESYQASSSSGLDEALIKSITVWKYKKNDGFVEETDHCSVCLSEFQENESLRILPKCSHPFHQPCIDTWLMSNSSCPLCRSTILPTNISPISAQPTQPSGLNLSALDSQSRINNQTVLMVQNFQEAIVVEAGGNGSPKHNRGRVSAERQSSEQRESIIEIREDGFQLQPFRRSVSMTSCSYPAHASVDDIFRATYNGERVEEEERRNLQMGIGSSRGIDKEDGRFDNKRGDLNLAMKRCISAGRILFTKE 353
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 6406828 6407889 - Bpe014234.1 Bpe14g00858 115167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe14g00858 353 MobiDBLite consensus disorder prediction 235 256 - -
Bpe14g00858 353 ProSiteProfiles Zinc finger RING-type profile. 141 183 IPR001841 -
Bpe14g00858 353 Pfam Ring finger domain 140 183 IPR001841 -
Bpe14g00858 353 CDD RING-H2_PA-TM-RING 140 183 - -
Bpe14g00858 353 PANTHER RING-H2 FINGER PROTEIN ATL53-RELATED 3 351 - -
Bpe14g00858 353 SMART ring_2 141 182 IPR001841 -
Bpe14g00858 353 SUPERFAMILY RING/U-box 126 189 - -
Bpe14g00858 353 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 101 188 IPR013083 -
Bpe14g00858 353 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 3 351 IPR044675 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe11g00330 Bpe-Chr11:2408078 Bpe14g00858 Bpe-Chr14:6406828 4.85E-61 dispersed
Bpe14g00858 Bpe-Chr14:6406828 Bpe14g00468 Bpe-Chr14:4197633 2.45E-23 dispersed
Bpe14g00858 Bpe-Chr14:6406828 Bpe04g00798 Bpe-Chr4:5240047 5.76E-32 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe14g00858 - - csv:101222852 300.441