Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe14g00892 ATGCCATATCCAAAACCTTGCGAGTATTTCTTAACAGAAAACCCTTCTGTTTTGCCCATCAGAGACAAATCTGATTTTCTGAAAATCGCCATTAAACTAGCTCTAGACCGAGCTGTAAACGCAGAGAAGAACACGCTTTTACTTGGCCTCAAGTGCAGAAACGAGAAAGAAAAAGCTGCCTGGGCCGACTGCCTTGAGCTTTACAAATACACCATTGAAAAGCTCAACAAAACCATCGACCCGAACATCAAGTGCAGCGACCACGACTCGCAGTCATGGCTGAGTACGGCTCTGACAAACCTCGAGACCTGCTGGGCTGGGTTCACAGAGCTCGGCGTCACCGACTACCTTCCTCCATTGATGTCTAACAACGTTTCGAAATTGATCTGCAACACTTTGTCTCTGAACAAACCTCTTTACAACCCGAAACCCAAATACAAACGCGGGTTTCCGACGTGGGTTAAGCCAGGTGACCGGAAACTGTTGCAAGCGCCTTCTCCGGCGGTATCTGCAAATATAGTGGTGGCTCAAGATGGGTCTGGAAATTATGACACGATTAGTGCCGCTGTTAAAGCCGCTTCTGACAGGTCGGGTACTGGGAGGTACGTGATTTACGTGAAAGCAGGAACTTATAAAGAGAACATCGAGATAAAAACGACGAACATCATGTTGGTCGGAGATGGAATCGGGAAAACCATCATTACCGGAAGTAAAAGCGTTGGTGGAGGTAGCACAACCTTCCGCTCAGCCACAGTTGCTGTGGTTGGAGATGGTTTTATTGGGCGTGACATCACAATTGTAAACACGGCCGGCCCAGAAAACCACCAAGCAGTGGCTCTCCGATCAGGCTCGGACTTTTCGGTGTTCTACAAATGCAGTTTTGAAGGCTATCAAGACACCCTTTACGCCCACTCGGAACGACAATTTTATCGAGAATGTGACATTTACGGCACAGTTGATTTCATTTTCGGCAATGCTGCTGTTGTGCTCCAAAACTGTAATATCTTTCCACGCAAACCTCCAAACAAGACCAACACTCTCACTGCTCAAGGCCGAACCGATCAGAACCAGAACACTGGGATTTCGATTATCAATTGTCGAGTCACAGCCTCGGCGGAGTTAGAACCTGTGGTTAGTACAGTCAAGACGTACCTAGGGCGGCCGTGGAAGGAGTATTCTAGAACTGTTTTCATGAAGACATACCTCGATAGCTTGATTAATCCCGCCGGATGGTTGGAGTGGAGTGGCGATTTTGCCTTAAAGACGTTGTATTATGGTGAGTATATGAATAATGGCCCTGGATCGTCAACTACCAATCGAGTTAACTGGCCAGGATATCGTGTCATCACAAGTGCTTCAGAAGCTTCGCAATTCACCGTCGAAAACTTTATCGCCGGAAACACTTGGCTTCCAGCTACTAATGTTCCGTACACAACAGGCATCTAA 1446 47.23 MPYPKPCEYFLTENPSVLPIRDKSDFLKIAIKLALDRAVNAEKNTLLLGLKCRNEKEKAAWADCLELYKYTIEKLNKTIDPNIKCSDHDSQSWLSTALTNLETCWAGFTELGVTDYLPPLMSNNVSKLICNTLSLNKPLYNPKPKYKRGFPTWVKPGDRKLLQAPSPAVSANIVVAQDGSGNYDTISAAVKAASDRSGTGRYVIYVKAGTYKENIEIKTTNIMLVGDGIGKTIITGSKSVGGGSTTFRSATVAVVGDGFIGRDITIVNTAGPENHQAVALRSGSDFSVFYKCSFEGYQDTLYAHSERQFYRECDIYGTVDFIFGNAAVVLQNCNIFPRKPPNKTNTLTAQGRTDQNQNTGISIINCRVTASAELEPVVSTVKTYLGRPWKEYSRTVFMKTYLDSLINPAGWLEWSGDFALKTLYYGEYMNNGPGSSTTNRVNWPGYRVITSASEASQFTVENFIAGNTWLPATNVPYTTGI 481
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 6662463 6664396 - Bpe014267.1 Bpe14g00892 115201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe14g00892 481 Pfam Plant invertase/pectin methylesterase inhibitor 2 135 IPR006501 GO:0004857
Bpe14g00892 481 PANTHER PECTINESTERASE 2 480 - -
Bpe14g00892 481 CDD PMEI-like_3 2 139 - -
Bpe14g00892 481 PANTHER PECTINESTERASE 2 480 - -
Bpe14g00892 481 ProSitePatterns Pectinesterase signature 2. 315 324 IPR033131 -
Bpe14g00892 481 TIGRFAM PME_inhib: pectinesterase inhibitor domain 2 137 IPR006501 GO:0004857
Bpe14g00892 481 SMART PMEI_2 1 135 IPR006501 GO:0004857
Bpe14g00892 481 Gene3D - 166 481 IPR012334 -
Bpe14g00892 481 Pfam Pectinesterase 172 467 IPR000070 GO:0030599|GO:0042545
Bpe14g00892 481 ProSitePatterns Pectinesterase signature 1. 198 217 IPR018040 -
Bpe14g00892 481 Gene3D Invertase/pectin methylesterase inhibitor family protein 1 139 IPR035513 -
Bpe14g00892 481 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 2 140 IPR035513 -
Bpe14g00892 481 SUPERFAMILY Pectin lyase-like 167 480 IPR011050 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g02161 Bpe-Chr2:22894363 Bpe14g00892 Bpe-Chr14:6662463 8.89E-126 dispersed
Bpe03g00345 Bpe-Chr3:6173372 Bpe14g00892 Bpe-Chr14:6662463 9.12E-170 dispersed
Bpe03g00695 Bpe-Chr3:27078457 Bpe14g00892 Bpe-Chr14:6662463 2.12E-147 dispersed
Bpe05g00207 Bpe-Chr5:13335516 Bpe14g00892 Bpe-Chr14:6662463 2.74E-118 dispersed
Bpe06g00535 Bpe-Chr6:16428946 Bpe14g00892 Bpe-Chr14:6662463 3.54E-140 dispersed
Bpe10g00981 Bpe-Chr10:15252538 Bpe14g00892 Bpe-Chr14:6662463 3.28E-171 dispersed
Bpe12g00391 Bpe-Chr12:9331378 Bpe14g00892 Bpe-Chr14:6662463 2.44E-145 dispersed
Bpe13g01126 Bpe-Chr13:16828866 Bpe14g00892 Bpe-Chr14:6662463 1.43E-130 dispersed
Bpe15g00401 Bpe-Chr15:15519019 Bpe14g00892 Bpe-Chr14:6662463 7.45E-108 dispersed
Bpe14g00892 Bpe-Chr14:6662463 Bpe14g00893 Bpe-Chr14:6669474 1.18E-136 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe14g00892 K01051 - vvi:100255703 774.237