Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe14g00893 TCGGAAAACATGTCAACGTTCTTACCCGCTTTCCTCCTCCTCTTAGCCATGGCTACCTCCACCTTCACCCTCCAACAACCTAACCCACTTCAAATGGCTCAAACCACAGTCACTGCAGCCAGAACCTGGGTCCAAGCCGCCATCCCATCGACGCCAAGCCATGGTTCTGAAATGGAGGACGTTGCCTTACTCGACTGCTTGAAGGTCTACGAGAAAAGCGAGTCTCTGCTGGCCCGGCTGCTACTCGGCCAGGCCCTCAGCCGCAACGACGCGGCCACCTGGCTTAGCGCCGTTGTTGCGAACCACGGGAGTTGCTTGAATAGTTTGAGGGAGATGGGCTTCGTTGAGGCTCGTCTTCCTCCGGTGGCCCAAAATTTGACCAGTTTACTCAATCAAGCTCTTCAATACGATTTATTCACGAAAGCATTTCCTCAAATTGATGCAGGAGGGCTGGAAGAAGAGAAGCTGAGCAGAAATGGAGGAGGGCTACTAGCAACGTGGAATGCAGCAACTTCAAGGGCAGATTTTGTGGTGGCCAAGGATGGATCAGGCACTCACAGAACAATCAACGAGGCGGTGGCTCAGCTGAGCAAAATGGGTAAAATAAGAGGAGATGGAAGAGTGATAATATATGTGAAATCTGGAGTTTACAGAGAGAAAGTAGAGATAGAAAGAGAAATGAAGAATATCATGTTTGTAGGGGATGGTATGGACAAGACTATAGTCACTGCAAGTTCAAACGTCCCTGATGGTGCCACTACTTTTAGTTCTGCAACATTTGGCGTATCTGGGGACGGATTTTGGGCTAGAAACGTGACATTTGATAACGCGGCTGGCCCACATAAGCACCAAGCAGTAGCACTGAGGGTGAGCTCGGATTTGTCAGTATTTTATCGATGCAGAATCAAAGGATACCAAGACACCCTCTTCGTACACACTCTGCGCCAATTCTACCGAGACTGTGAGATTCACGGCACCATCGATTTCATATTCGGCGACGCTTCGGCTGTGCTCCAAAACTGCGACATTCTCGTGAGGAAACCCATGGAACACCAAGCAAACATGATCACAGCCCAAGGGAGAGAAAACCCTAATGAAAACACAGGAATTGCCATCCATAACTCACGTGTTAGGCCAGCAGCTGACTTCAGGGCTGTGAAGAACTCCTTCAAAACTTACTTGGGGAGGCCATGGAAGAAGTATTCAAGAACTGTGTTTATCAAAACAGATTTGGATGGGATGATTGACCCAAAGGGTTGGAGAGAATGGGATGGAAATTTTGGTCTTTCAACGTTGTATTACGGGGAATATATGAACACCGGAGTTGGAGCTTCAACCGCGAATAGAGTAAGATGGCATGGTTTTCATGTTCTTCGTAGTCCATCGGAGGCTGAGCCATTCTTAGTTCGTCGTTTCATTCAAGGCGAGTCTTGGATTCCGGCGACCGGAGTGCCTTGTTGGCTTGGAATTTGA 1473 48.61 SENMSTFLPAFLLLLAMATSTFTLQQPNPLQMAQTTVTAARTWVQAAIPSTPSHGSEMEDVALLDCLKVYEKSESLLARLLLGQALSRNDAATWLSAVVANHGSCLNSLREMGFVEARLPPVAQNLTSLLNQALQYDLFTKAFPQIDAGGLEEEKLSRNGGGLLATWNAATSRADFVVAKDGSGTHRTINEAVAQLSKMGKIRGDGRVIIYVKSGVYREKVEIEREMKNIMFVGDGMDKTIVTASSNVPDGATTFSSATFGVSGDGFWARNVTFDNAAGPHKHQAVALRVSSDLSVFYRCRIKGYQDTLFVHTLRQFYRDCEIHGTIDFIFGDASAVLQNCDILVRKPMEHQANMITAQGRENPNENTGIAIHNSRVRPAADFRAVKNSFKTYLGRPWKKYSRTVFIKTDLDGMIDPKGWREWDGNFGLSTLYYGEYMNTGVGASTANRVRWHGFHVLRSPSEAEPFLVRRFIQGESWIPATGVPCWLGI 490
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 6669474 6671780 + Bpe014268.1 Bpe14g00893 115202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe14g00893 490 ProSitePatterns Pectinesterase signature 2. 323 332 IPR033131 -
Bpe14g00893 490 CDD PMEI-like_4 23 134 - -
Bpe14g00893 490 Gene3D - 169 490 IPR012334 -
Bpe14g00893 490 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 36-RELATED 12 489 - -
Bpe14g00893 490 PANTHER PECTINESTERASE 12 489 - -
Bpe14g00893 490 ProSitePatterns Pectinesterase signature 1. 204 223 IPR018040 -
Bpe14g00893 490 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 30 134 IPR035513 -
Bpe14g00893 490 SUPERFAMILY Pectin lyase-like 170 488 IPR011050 -
Bpe14g00893 490 Pfam Pectinesterase 175 476 IPR000070 GO:0030599|GO:0042545
Bpe14g00893 490 Pfam Plant invertase/pectin methylesterase inhibitor 31 130 IPR006501 GO:0004857
Bpe14g00893 490 Gene3D Invertase/pectin methylesterase inhibitor family protein 17 136 IPR035513 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe14g00893 Bpe-Chr14:6669474 Bpe03g00695 Bpe-Chr3:27078457 4.80E-126 dispersed
Bpe14g00892 Bpe-Chr14:6662463 Bpe14g00893 Bpe-Chr14:6669474 1.18E-136 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe14g00893 K01051 - zju:107406889 589.726