Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe14g00906 ATGGTGAGAGGAAAGACTCAGCTGCGTCGAATAGAAGACAATACGAGCCGACAGGTTACGTTTTCGAAACGACGACACGGATTGCTGAAGAAGGCATTTGAACTCTCTGTTCTTTGCGATGCAGAGATAGCTCTCATCATCTTCTCTCCCAAAGGAAAGCTCCATGAATTTGCAAGCTCTGGCACCATGCAAAAGACGATAGACCGCTACATGAAGCAAGGCCAAGGCGCTCAAGTCAATTCTAACCTTTTCGAATCACATATCCAGCGCTTGAAGTGTGAGACTGAGAATATGAAGAAGGAGATGGATGAGTTTGAAGTTTCAAAGAGGAAGCTTTTGGGAGGTTTGACATCATGCTCTTTGGAAGAACTTCATAGCACAGAGCAACAGTTGGAGAAGAGCTTAAGCAATGTTAGAGCCAGAAAGATTCAGCTCTTCGAGGAACAAATCCAACGACTCAAAGAGAAGGAAAAATCCATAGAAGCAGAAAACATTAGGCTACGCGAGAAGGAAATAATCCTAGAAAGGGAAACTACCAGACTATGTGTCAAGTGTGGCCATCAACCACAAAAACCACCAACTGAAAAAAAAGAAAATTTAGCAACTGTTGAAGAAACTAGTTCGATTTCAGACGTGGAGACAGCATTATTCATCGGCTGGCCACGAACCCGAGCCGACCCTGAGGCCATCACCGATCTAAATTTAGTAGCTGTCGAAGAAACTAGTTGTACCTCAGGTGTGGAGACAGCATTATTCATCGGATGGCCACAAACACCAACACGAGCCGGAGCCGGAGCCGGAGCCGGAGCCGGAGCCGGGGCCGGGGCCGGGGCCGGGGCCGGAGCAGGCCAGCTCCCTTCTACCAAACTCATTGGTAATGTTTTTCCAAACATATTGTAA 900 47.11 MVRGKTQLRRIEDNTSRQVTFSKRRHGLLKKAFELSVLCDAEIALIIFSPKGKLHEFASSGTMQKTIDRYMKQGQGAQVNSNLFESHIQRLKCETENMKKEMDEFEVSKRKLLGGLTSCSLEELHSTEQQLEKSLSNVRARKIQLFEEQIQRLKEKEKSIEAENIRLREKEIILERETTRLCVKCGHQPQKPPTEKKENLATVEETSSISDVETALFIGWPRTRADPEAITDLNLVAVEETSCTSGVETALFIGWPQTPTRAGAGAGAGAGAGAGAGAGAGAGQLPSTKLIGNVFPNIL 299
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 6756127 6763426 - Bpe014280.1 Bpe14g00906 115215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe14g00906 299 Gene3D - 13 111 IPR036879 GO:0003677|GO:0046983
Bpe14g00906 299 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 57 IPR002100 GO:0003677|GO:0046983
Bpe14g00906 299 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Bpe14g00906 299 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Bpe14g00906 299 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Bpe14g00906 299 Coils Coil 88 108 - -
Bpe14g00906 299 Pfam K-box region 86 170 IPR002487 GO:0003700|GO:0005634|GO:0006355
Bpe14g00906 299 PANTHER MADS-BOX PROTEIN SOC1 1 223 - -
Bpe14g00906 299 Coils Coil 143 170 - -
Bpe14g00906 299 MobiDBLite consensus disorder prediction 262 282 - -
Bpe14g00906 299 CDD MADS_MEF2_like 3 72 IPR033896 GO:0000977|GO:0045944
Bpe14g00906 299 ProSitePatterns MADS-box domain signature. 3 57 IPR002100 GO:0003677|GO:0046983
Bpe14g00906 299 ProSiteProfiles K-box domain profile. 88 177 IPR002487 GO:0003700|GO:0005634|GO:0006355
Bpe14g00906 299 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
Bpe14g00906 299 SUPERFAMILY SRF-like 3 74 IPR036879 GO:0003677|GO:0046983
Bpe14g00906 299 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Bpe14g00906 299 Coils Coil 121 141 - -
Bpe14g00906 299 PANTHER MADS BOX PROTEIN 1 223 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe05g00920 Bpe14g00906 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe05g00920 Bpe-Chr5:22177393 Bpe14g00906 Bpe-Chr14:6756127 1.71E-59 dispersed
Bpe14g00906 Bpe-Chr14:6756127 Bpe03g00324 Bpe-Chr3:4797532 3.12E-38 dispersed
Bpe14g00906 Bpe-Chr14:6756127 Bpe08g01465 Bpe-Chr8:15372298 7.00E-51 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22487 PF01486 K-box 2.70E-20 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe14g00906 - - qsu:112012679 236.113