Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe14g00906 | ATGGTGAGAGGAAAGACTCAGCTGCGTCGAATAGAAGACAATACGAGCCGACAGGTTACGTTTTCGAAACGACGACACGGATTGCTGAAGAAGGCATTTGAACTCTCTGTTCTTTGCGATGCAGAGATAGCTCTCATCATCTTCTCTCCCAAAGGAAAGCTCCATGAATTTGCAAGCTCTGGCACCATGCAAAAGACGATAGACCGCTACATGAAGCAAGGCCAAGGCGCTCAAGTCAATTCTAACCTTTTCGAATCACATATCCAGCGCTTGAAGTGTGAGACTGAGAATATGAAGAAGGAGATGGATGAGTTTGAAGTTTCAAAGAGGAAGCTTTTGGGAGGTTTGACATCATGCTCTTTGGAAGAACTTCATAGCACAGAGCAACAGTTGGAGAAGAGCTTAAGCAATGTTAGAGCCAGAAAGATTCAGCTCTTCGAGGAACAAATCCAACGACTCAAAGAGAAGGAAAAATCCATAGAAGCAGAAAACATTAGGCTACGCGAGAAGGAAATAATCCTAGAAAGGGAAACTACCAGACTATGTGTCAAGTGTGGCCATCAACCACAAAAACCACCAACTGAAAAAAAAGAAAATTTAGCAACTGTTGAAGAAACTAGTTCGATTTCAGACGTGGAGACAGCATTATTCATCGGCTGGCCACGAACCCGAGCCGACCCTGAGGCCATCACCGATCTAAATTTAGTAGCTGTCGAAGAAACTAGTTGTACCTCAGGTGTGGAGACAGCATTATTCATCGGATGGCCACAAACACCAACACGAGCCGGAGCCGGAGCCGGAGCCGGAGCCGGAGCCGGGGCCGGGGCCGGGGCCGGGGCCGGAGCAGGCCAGCTCCCTTCTACCAAACTCATTGGTAATGTTTTTCCAAACATATTGTAA | 900 | 47.11 | MVRGKTQLRRIEDNTSRQVTFSKRRHGLLKKAFELSVLCDAEIALIIFSPKGKLHEFASSGTMQKTIDRYMKQGQGAQVNSNLFESHIQRLKCETENMKKEMDEFEVSKRKLLGGLTSCSLEELHSTEQQLEKSLSNVRARKIQLFEEQIQRLKEKEKSIEAENIRLREKEIILERETTRLCVKCGHQPQKPPTEKKENLATVEETSSISDVETALFIGWPRTRADPEAITDLNLVAVEETSCTSGVETALFIGWPQTPTRAGAGAGAGAGAGAGAGAGAGAGQLPSTKLIGNVFPNIL | 299 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 6756127 | 6763426 | - | Bpe014280.1 | Bpe14g00906 | 115215 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe14g00906 | 299 | Gene3D | - | 13 | 111 | IPR036879 | GO:0003677|GO:0046983 | |
Bpe14g00906 | 299 | Pfam | SRF-type transcription factor (DNA-binding and dimerisation domain) | 10 | 57 | IPR002100 | GO:0003677|GO:0046983 | |
Bpe14g00906 | 299 | PRINTS | MADS domain signature | 38 | 59 | IPR002100 | GO:0003677|GO:0046983 | |
Bpe14g00906 | 299 | PRINTS | MADS domain signature | 23 | 38 | IPR002100 | GO:0003677|GO:0046983 | |
Bpe14g00906 | 299 | PRINTS | MADS domain signature | 3 | 23 | IPR002100 | GO:0003677|GO:0046983 | |
Bpe14g00906 | 299 | Coils | Coil | 88 | 108 | - | - | |
Bpe14g00906 | 299 | Pfam | K-box region | 86 | 170 | IPR002487 | GO:0003700|GO:0005634|GO:0006355 | |
Bpe14g00906 | 299 | PANTHER | MADS-BOX PROTEIN SOC1 | 1 | 223 | - | - | |
Bpe14g00906 | 299 | Coils | Coil | 143 | 170 | - | - | |
Bpe14g00906 | 299 | MobiDBLite | consensus disorder prediction | 262 | 282 | - | - | |
Bpe14g00906 | 299 | CDD | MADS_MEF2_like | 3 | 72 | IPR033896 | GO:0000977|GO:0045944 | |
Bpe14g00906 | 299 | ProSitePatterns | MADS-box domain signature. | 3 | 57 | IPR002100 | GO:0003677|GO:0046983 | |
Bpe14g00906 | 299 | ProSiteProfiles | K-box domain profile. | 88 | 177 | IPR002487 | GO:0003700|GO:0005634|GO:0006355 | |
Bpe14g00906 | 299 | ProSiteProfiles | MADS-box domain profile. | 1 | 61 | IPR002100 | GO:0003677|GO:0046983 | |
Bpe14g00906 | 299 | SUPERFAMILY | SRF-like | 3 | 74 | IPR036879 | GO:0003677|GO:0046983 | |
Bpe14g00906 | 299 | SMART | madsneu2 | 1 | 60 | IPR002100 | GO:0003677|GO:0046983 | |
Bpe14g00906 | 299 | Coils | Coil | 121 | 141 | - | - | |
Bpe14g00906 | 299 | PANTHER | MADS BOX PROTEIN | 1 | 223 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bpe05g00920 | Bpe14g00906 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe05g00920 | Bpe-Chr5:22177393 | Bpe14g00906 | Bpe-Chr14:6756127 | 1.71E-59 | dispersed | |
Bpe14g00906 | Bpe-Chr14:6756127 | Bpe03g00324 | Bpe-Chr3:4797532 | 3.12E-38 | dispersed | |
Bpe14g00906 | Bpe-Chr14:6756127 | Bpe08g01465 | Bpe-Chr8:15372298 | 7.00E-51 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
22487 | PF01486 | K-box | 2.70E-20 | No_clan | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe14g00906 | - | - | qsu:112012679 | 236.113 |