Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe14g00976 ATGGATCGGAGGGACCCTTTGGCATTATCGGGATCGCAATCGTTCTATATGCAGAGAGGAATAATTGGTTCGGTCTCAAATCCTCATTCTGGATTACAAGGGTCTCAAGCCCTTGGATCGATAACGAGCCAAACAGCGCATGTTCAGTCCATTGGTTCGACATTACAGATTGAACATTCCCAATCAATTTCCCATCGTACAGTCGATTTTGGTGGACACAATTTCGGTGGACAATCAGTAATGGCATCGGCCGAGCCGATGAAAAGAAAGCGGGGGAGGCCTCGGAAGTATGGACCGGATGGAAATGTCTCGCTGGCTCTGTCCCCATCTGCACCATCCAATCATGGAATGGTGTCGCCTCTGTTGAAGCGAGGAAGAGGTCGACCTCCTGGAACCGGGAGGAAACAACAATTAGCTTCTCTCGGCGAATGGCCTTCTGGGTCTGCTGGGGTGGGTTTCACTCCCCATATTATCTCTATTGGAGTAGGGGAAGACATTGCTGCAAAAGTTGTGTCGTTTTCCCAGCAGGGGCCGAGAGCTATATGCATCTTATCGGTTAGTGGTGCTGTTTCCACTGTGACTCTTCATCAGCCTTCGACTTCCTCCGGTGGCACTGTCACATATGAGGGACGGTTTGAGATTGTATCTTTGTCGGGGTCGTACCTGCTCGACGACAGCACTGGATCGCGGGGCCGAAGCGGCGGCCTAAGTGTCTCCCTTGCCAGTCCTGATGGCCATGTGATTGGTGGGAGAGTCGGTGGAGTTCTTGTTGCTGCAACCCCTGTTCAGGTGATTCTAGGAAGCTTCATGTGGGGTGGATCGAGAACTAAGAACAAAGGAAGGGAAGCTTTAGAAGGCATGATAGACTCCGACCAACAGACAATGGTGAATTCGACAGGGGCTGCATTGCATAGTGTTGCTCTCAGCCCAGCCTCCTCCCCGATCAGAGTTTGGCCGACCCCTCAGCCGGTGGACTTGCGTAGCTCCCATATCGACATCGACTTGATGAGAGGATAA 1017 51.92 MDRRDPLALSGSQSFYMQRGIIGSVSNPHSGLQGSQALGSITSQTAHVQSIGSTLQIEHSQSISHRTVDFGGHNFGGQSVMASAEPMKRKRGRPRKYGPDGNVSLALSPSAPSNHGMVSPLLKRGRGRPPGTGRKQQLASLGEWPSGSAGVGFTPHIISIGVGEDIAAKVVSFSQQGPRAICILSVSGAVSTVTLHQPSTSSGGTVTYEGRFEIVSLSGSYLLDDSTGSRGRSGGLSVSLASPDGHVIGGRVGGVLVAATPVQVILGSFMWGGSRTKNKGREALEGMIDSDQQTMVNSTGAALHSVALSPASSPIRVWPTPQPVDLRSSHIDIDLMRG 338
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
14 7213974 7215686 - Bpe014350.1 Bpe14g00976 115285
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bpe14g00976 338 SUPERFAMILY AF0104/ALDC/Ptd012-like 153 271 - -
Bpe14g00976 338 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 44 297 IPR039605 GO:0003680
Bpe14g00976 338 Pfam Plants and Prokaryotes Conserved (PCC) domain 155 269 IPR005175 -
Bpe14g00976 338 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 44 297 - -
Bpe14g00976 338 Gene3D - 155 285 - -
Bpe14g00976 338 ProSiteProfiles PPC domain profile profile. 149 291 IPR005175 -
Bpe14g00976 338 CDD DUF296 154 269 IPR005175 -
Bpe14g00976 338 MobiDBLite consensus disorder prediction 67 143 - -
Bpe14g00976 338 SMART AT_hook_2 123 135 IPR017956 GO:0003677
Bpe14g00976 338 SMART AT_hook_2 88 100 IPR017956 GO:0003677
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g00843 Bpe-Chr8:10724681 Bpe14g00976 Bpe-Chr14:7213974 6.94E-62 dispersed
Bpe11g00343 Bpe-Chr11:2474577 Bpe14g00976 Bpe-Chr14:7213974 8.58E-62 dispersed
Bpe13g00952 Bpe-Chr13:15419854 Bpe14g00976 Bpe-Chr14:7213974 1.95E-173 wgd
Bpe14g00976 Bpe-Chr14:7213974 Bpe05g00642 Bpe-Chr5:20235543 6.66E-77 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe14g00976 - - rcu:8261862 385.571