Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe14g00997 TTAGATTCAGCAATGGCAGGCTACCCTCTTTTCTCTCTATCATCAAAGGGCCAAAGAATCAATCTCTACAAATTAATCTTTGTAACGATCATCTGCACCGCTTTCTACCTCATCGGCGTTTGGCAACACCCCACAGTCACCGACCCAGTCTTATCCTCCACCGTCCTTCCATGCACCTCCTCGACGACGCTCTCCAAATCTCCTGAAACTGCCGCCACCGCCATCAAACTCAACTTCGAGCCCCACCACCAAGGAGAAGATTTTCCGGTGACCCAACCGGCTGGTGATCTTCAGTTTCCGCTTTGCGACGCTAAGTTCTCCGAGTACACGCCGTGTGAAGACGTCCAAAGATCATTGAAATTCGACCGGGACCGGTTGATATACAGAGAGAGGCACTGCCCGGAAAAGAGCGAGTTATTACGGTGCCGGATTCCTGCTCCGTTCGGCTACAAGGTGCCGTTCCGGTGGCCGGAGAGCAGAGGCGCAGTTTGGTATGCGAACGTACCGCACAAAGAGCTTACTGTCGAGAAAAAAAATCAGAATTGGGTCCGGTTCAAGGGAGACCGGTTCACATTTCCTGGCGGTGGGACCATGTTCCCAGACGGAGCAGACGCGTACATTAACGACATTGGGAAATTGATCGACATAACTGACGGTTCAATCCGGACCGCCATCGACACCGGCTGCGGGGTGGCTAGTTGGGGTGCATATTTGATGTCAAGGAACATAATAGCTGTGTCATTTGCACCAAGAGACACACATGAAGCACAAGTTCAATTTGCACTTGAAAGAGGAGTGCCTGCATTGATTGGAGTTCTAGCCTCAAAAAGGCTTCCCTATCCTTCAAGAGCTTTCGACATGGCTCATTGCTCGCGCTGCCTCATACCGTGGGGCCTTTCCGCAGATGGGCAGTACTTGATCGAAGTTGATAGGATATTACGTCCCGGTGGATATTGGATTTTGTCCGGCCCGCCGATAAATTGGCAGAAACACTGGAAAGGATGGGAGAGAACAATTGAGGATCTTCAATTCGAACAGAATCAGATTGAGGCCATAGCCAAAAGCATGTGCTGGAAAAAAATAAAGCAAAAGGAGGATCTTGCTATTTGGCAGAAACCTACTAACCACATCCACTGTAAAAAGAACAGAAAGGTCTTCAAGAAACCTACATTTTGTCCCCCACAAGACCCCGACATGGCCTGGTACACTGAAATGGGGACTTGTTTAACTCCACTCCCTGAAGTGTCTGGAATCAAAGAATTTGCCGGCGGGTATTTGGCGAAATGGCCCGAAAGATTGACTTCAATCCCGCCGAGAATTAGCAGCGGAAGTTTGAAGGACATCACAGCAGAGAAGTTCATAGAAAACACAGAATTATGGAAAAAGAGAGTCGAACATTACAAAACATTCGATTCCCAGTTGGCCGAGTCGGGAAGATACCGGAATTTACTCGATATGAACTCGTATTTGGGAGGGTTTGCGGCGGCTCTGGTGGATTATCCTTTGTGGGTTATGAACGTTGTTCCTGTTGAAGCAGAAGTTAACACTCTTGGGGTCATCTTTGAACGCGGGCTGATTGGAACATACCAGAACTGGTGCGAGGCGATGTCGACGTATCCGAGAACCTACGATTTCATCCACGCCGACTCCGTCTTTAGTCTGTACAAAGACAGATGTGAAGCAGAAGACATTCTGCTGGAAATGGATAGGATTTTAAGGCCTCAGGGGAGTGTAATTTTCCGGGACGACGTCGATATTTTGGTGAAGATCCGGAGCCTGACAGACGCACTGCAGTGGGATAGCAGAATCGTCGATCACGAGAAGGGGCCGCATCAGAGGGAGAAGATCTTAATTGCAGTGAAGCAGTATTGGACTGCGCCGGAAGATGACCAAAACCAATCGGAAACAGATATAGACCAATAG 1923 48.93 LDSAMAGYPLFSLSSKGQRINLYKLIFVTIICTAFYLIGVWQHPTVTDPVLSSTVLPCTSSTTLSKSPETAATAIKLNFEPHHQGEDFPVTQPAGDLQFPLCDAKFSEYTPCEDVQRSLKFDRDRLIYRERHCPEKSELLRCRIPAPFGYKVPFRWPESRGAVWYANVPHKELTVEKKNQNWVRFKGDRFTFPGGGTMFPDGADAYINDIGKLIDITDGSIRTAIDTGCGVASWGAYLMSRNIIAVSFAPRDTHEAQVQFALERGVPALIGVLASKRLPYPSRAFDMAHCSRCLIPWGLSADGQYLIEVDRILRPGGYWILSGPPINWQKHWKGWERTIEDLQFEQNQIEAIAKSMCWKKIKQKEDLAIWQKPTNHIHCKKNRKVFKKPTFCPPQDPDMAWYTEMGTCLTPLPEVSGIKEFAGGYLAKWPERLTSIPPRISSGSLKDITAEKFIENTELWKKRVEHYKTFDSQLAESGRYRNLLDMNSYLGGFAAALVDYPLWVMNVVPVEAEVNTLGVIFERGLIGTYQNWCEAMSTYPRTYDFIHADSVFSLYKDRCEAEDILLEMDRILRPQGSVIFRDDVDILVKIRSLTDALQWDSRIVDHEKGPHQREKILIAVKQYWTAPEDDQNQSETDIDQ 640
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 7361437 7365307 + Bpe014370.1 Bpe14g00997 115306

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe14g00997 640 Gene3D Vaccinia Virus protein VP39 172 386 IPR029063 -
Bpe14g00997 640 PANTHER METHYLTRANSFERASE PMT15-RELATED 13 629 - -
Bpe14g00997 640 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 467 597 IPR029063 -
Bpe14g00997 640 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 13 629 IPR004159 GO:0008168
Bpe14g00997 640 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 130 357 IPR029063 -
Bpe14g00997 640 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 108 621 IPR004159 GO:0008168
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe14g00997 - - - csv:101206343 993.801
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe05g00778 Bpe-Chr5:21103709 Bpe14g00997 Bpe-Chr14:7361437 0 dispersed
Bpe11g00386 Bpe-Chr11:2929960 Bpe14g00997 Bpe-Chr14:7361437 0 dispersed
Bpe11g01640 Bpe-Chr11:12526683 Bpe14g00997 Bpe-Chr14:7361437 0 dispersed
Bpe13g00287 Bpe-Chr13:10748746 Bpe14g00997 Bpe-Chr14:7361437 0 dispersed
Bpe14g00997 Bpe-Chr14:7361437 Bpe08g00920 Bpe-Chr8:11641499 0 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g1151 . . . . . Bpe14g00997 . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone11ag0622 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Vvi15g560 . . . . Bpe14g00997 . . . . . . Cma14g02013 Car06g00940 Car14g01814 . Cpe08g00515 Cpe03g01709 Bhi01g00414 . . . . . . Cla05g00194 . Cec05g0212 Cco05g0220 Clacu05g0209 Cmu05g0201 Cre05g0261 . . Cone11ag0405 Cone18ag1104 Lsi05g02009 . . Cme06g00208 . . Bda11g00289 . . . . . . Cmo06g01130 Cmo14g02073 . . . . . . . . . . . . . . . . . . . . . Csa03g00921 Chy06g00198 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002128 2 2 2 2 2 2 3 2 2 2 2 2 3 2 2 4 2 3 1 2 2 2 2 2 2 2 2 3 2 2 65
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe14g00997 Bpe_Chr14 FPKM 27.380753 29.683559 29.00396 27.866875 37.749889 37.803432 37.345867 23.956184 20.281586 21.534235