Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe14g01007 TACATTTGTTTTCCAGATTGGAACTCCGATTCAAGGTCATTTATTCAGGGCATCGATGTGAATCAAGCTCCGGCGACGGTGGACTGTGAGGAAGAACCCGACAGTACGATTTCGAGCTTAAGCGGGAAGAGAAGAGAAAGGGAAGAAGTTTCAGACGATAACGACGGGGAGAGGGATTCCTGCTCTCCTGGAAGCGGCGAAGACGACGTCCCTGGCGGGGTAGTCGGAGGTGAATCAAGGAGGAAGAAGCTTAGGCTTTCTAAGGAGCAGTCGACGCTGCTTGAAGAAAGATTCAAAGCGGAGAATACTCTAAACCCGAAGCAAAAGCTAGAGCTGTCGAAGAAACTGAAACTGACGCTTAGACAAGTGGAAGTCTGGTTTCAGAACAGAAGAGCAAGGACGAAGCTGAAGCAAAAGGAGGTGGATTGTGAGTACATGAAGAAATGGTGTGAGAAAGTGAGCAGGGAAAACAAGAGGTTGGAGAAGGAGATTTTGGAGCTAAGGGCACTTCACTTTTCTCCTCCCACAACCCTTCCTCTCTGCCCTCACTGCCAACCAATTCCCGCCCCTGTCAATCCCGATCGTTCAATCATCCCGTGGACCCCGCTGCCGCTCCGACCATGA 624 50.48 YICFPDWNSDSRSFIQGIDVNQAPATVDCEEEPDSTISSLSGKRREREEVSDDNDGERDSCSPGSGEDDVPGGVVGGESRRKKLRLSKEQSTLLEERFKAENTLNPKQKLELSKKLKLTLRQVEVWFQNRRARTKLKQKEVDCEYMKKWCEKVSRENKRLEKEILELRALHFSPPTTLPLCPHCQPIPAPVNPDRSIIPWTPLPLRP 207
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 7463407 7464204 + Bpe014380.1 Bpe14g01007 115316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe14g01007 207 MobiDBLite consensus disorder prediction 24 82 - -
Bpe14g01007 207 ProSiteProfiles 'Homeobox' domain profile. 77 137 IPR001356 GO:0003677
Bpe14g01007 207 SMART HOX_1 79 141 IPR001356 GO:0003677
Bpe14g01007 207 Coils Coil 150 170 - -
Bpe14g01007 207 Gene3D - 29 141 - -
Bpe14g01007 207 PANTHER - 6 187 - -
Bpe14g01007 207 MobiDBLite consensus disorder prediction 37 64 - -
Bpe14g01007 207 Pfam Homeodomain 80 135 IPR001356 GO:0003677
Bpe14g01007 207 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT3 6 187 - -
Bpe14g01007 207 SMART halz 137 180 IPR003106 GO:0006355|GO:0043565
Bpe14g01007 207 Pfam HD-ZIP protein N terminus 8 48 IPR006712 GO:0005634
Bpe14g01007 207 CDD homeodomain 80 138 IPR001356 GO:0003677
Bpe14g01007 207 SUPERFAMILY Homeodomain-like 60 139 IPR009057 -
Bpe14g01007 207 ProSitePatterns 'Homeobox' domain signature. 112 135 IPR017970 GO:0000981|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe14g01007 Bpe-Chr14:7463407 Bpe10g00572 Bpe-Chr10:12688150 2.38E-46 dispersed
Bpe14g01007 Bpe-Chr14:7463407 Bpe06g00652 Bpe-Chr6:17223437 1.39E-47 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22498 PF00046 Homeodomain 1.10E-14 CL0123 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe14g01007 K09338 - tcc:18614452 226.098