Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe14g01050 TGGTTTTCAGGTATTTCTCAATGGGATAATGATAAAGATGCAGAAATTTTACGTCTTGGATATGTTAAGCCCGAGATAATTAGCTGGTCACCACGAATAATTGTACTTCATAATTTTTTGAGCACGGAGGAATGCGACTATCTTAGAGCTATAGCTCTTCCTCTGCTTGAAATTTCCACTGTTGTTGATGTGAAAACAGGGAAGGGAATGAAGAGTGATGTCAGAACAAGCTCTGGTATGTTTTTAAGCCGTGCACAGAGAAAGTATCCAATTATAAAGGCAATTGAAAAACGCATATCTGTCTATGCCCAAGTACCAGTAGAAAATGGGGAGCTTATCCAAGTTCTAAGGTATGAAAAAGGTCAGTTCTACAGACCCCATCACGACTATTTTTCTGATACTTTTAACTTGAAACGTGGGGGCCAACGAATAGCGACAATTCTTATGTATCTAAGTGACAATGTTGAAGGTGGAGAAACCTATTTCCCACAGGCTGGTTCTGGCGAGTGCAGTTGTGGTGGAAAAACTGTGCAAGGATTGTCTGTTAAGCCTGTTAAAGGGGACGCTGTGCTTTTCTGGAGCATGGGGTTAGATGGGCAGACAGATCCCAACAGCGTACATGGAGGATGTGAGGTGGTATCTGGGGAAAAATGGTCAGCTACAAAATGGATGAGGCAAAGAAGTACCCTTTCCAATTCTTGA 702 41.88 WFSGISQWDNDKDAEILRLGYVKPEIISWSPRIIVLHNFLSTEECDYLRAIALPLLEISTVVDVKTGKGMKSDVRTSSGMFLSRAQRKYPIIKAIEKRISVYAQVPVENGELIQVLRYEKGQFYRPHHDYFSDTFNLKRGGQRIATILMYLSDNVEGGETYFPQAGSGECSCGGKTVQGLSVKPVKGDAVLFWSMGLDGQTDPNSVHGGCEVVSGEKWSATKWMRQRSTLSNS 233
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 7839712 7849433 + Bpe014424.2 Bpe14g01050 115359

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe14g01050 233 PANTHER BNAA04G24820D PROTEIN 4 229 - -
Bpe14g01050 233 Gene3D q2cbj1_9rhob like domain 25 225 - -
Bpe14g01050 233 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 109 226 IPR005123 -
Bpe14g01050 233 SMART p4hc 31 225 IPR006620 GO:0005506|GO:0016705|GO:0031418
Bpe14g01050 233 PANTHER PROLYL 4-HYDROXYLASE ALPHA SUBUNIT 4 229 IPR045054 -
Bpe14g01050 233 Pfam 2OG-Fe(II) oxygenase superfamily 113 225 IPR044862 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe14g01050 K00472 P4HA; prolyl 4-hydroxylase [EC:1.14.11.2] - jre:108993853 414.075
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bpe13g00639 Bpe14g01050 CCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe14g01050 Bpe-Chr14:7839712 Bpe14g01160 Bpe-Chr14:8641099 6.19E-64 dispersed
Bpe14g01050 Bpe-Chr14:7839712 Bpe10g00169 Bpe-Chr10:4140806 2.45E-77 transposed
Bpe14g01050 Bpe-Chr14:7839712 Bpe06g00145 Bpe-Chr6:2591832 1.16E-77 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g1099 . . . . . Bpe14g01050 . . . . Cma06g01625 . . . Sed02g1052 Cpe08g00102 Cpe03g01265 Bhi01g02618 Tan10g1227 Cmetu07g0599 . Hepe05g1285 . Lcy11g1242 . . . . . . . . . . Cone11ag0636 . . . . . Blo07g00195 . Bda13g00264 . Bpe13g00639 Bma02g00980 . . Cmo06g01621 . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007865 1 2 0 1 1 1 2 1 2 1 1 1 2 1 1 3 1 1 2 1 1 1 1 0 2 1 1 1 1 1 36
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe14g01050 Bpe_Chr14 FPKM 20.259649 20.208534 22.601679 23.618219 15.689632 12.474262 16.458889 35.06995 36.357208 36.071545