Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe14g01053 ATGTACAAATCAACTTCTTCGTCTATATCGTCACAGAACTCCATGGGGACCAGCACCGGTGGCGGCCTAACTCGCTACGTCTCCGCCCCCGGTTCTTTCCTGACCTCAGCAGTTGATTCCGTGATCGGAGCGCATCCGAGCTCTGGTGTTCGATCTCAGCAGGGCATGGTGAACCCCTATTTCTCCTCCGGAGACTCCTCCGTCGAGTCGTCCAGTAAAATCATGTACGCCGCCGCATCCAACAATCCAAGAGGCTTGCAGAGGTCGTACGGCAGCCAGGAGCTGGCGCTTGGAGATTTGAACGGCATTGGAGGTGGATCTTCTTCTTCCTCAACTTCCTCTTCTTCTTCGTCTTTGATGAGGCAGAGAAGCTCACCGCCGGGTTTCTTCTCCCACCTCGCCGCTCCGGATAGCAATGGATTTTCAGTTTCAAGGGAAGGTGGGAATTACGGCTCACAAGGTGGCCCCAGTGCTCTTGGAGTTTCAAGATTGAAGCCTCAGCTGAGCTTCACAAGGCAAGATTCCCTCTCACAGATTTCTGAAGTGTCCGAGAATATAATTGACGGCATCGATTCGAATAATGCTCGCCAATCTTATGGCACTGCAACTAGCTTCGGGATTGGCTCTTGGGATGCCACCAATACCGTCGTGTTTTCTTCCCTCCAAAACAAACGACCCAAGAACATTGATCCGGACATGTTCGACTCCCTTAACGTCTTAGATTCTCAGTTTAATCTTCCGGCAAGTCTGGAGTTGGCATCGATGGAGAAGCTACTCCACATTCCCGAAGATTCTGTCCCCTGCAAGATCCGTGCCAAACGTGGTTGTGCGACTCATCCCCGAAGTATTGCCGAAAGGGAAAGGAGGACGAGAATAAGTGGGAAGTTGAAAAAATTACAAGAACTTGTGCCTAACATGGATAAGCAAACAAGCTACGCCGACATGTTGGACTTGGCAGTGCAGCATATAAAGGGACTTCAAAATCAAATCGAGAATCTTCACAAGGACCTTGAGAATTGCACGTGTGGATGCAAATAG 1038 50.19 MYKSTSSSISSQNSMGTSTGGGLTRYVSAPGSFLTSAVDSVIGAHPSSGVRSQQGMVNPYFSSGDSSVESSSKIMYAAASNNPRGLQRSYGSQELALGDLNGIGGGSSSSSTSSSSSSLMRQRSSPPGFFSHLAAPDSNGFSVSREGGNYGSQGGPSALGVSRLKPQLSFTRQDSLSQISEVSENIIDGIDSNNARQSYGTATSFGIGSWDATNTVVFSSLQNKRPKNIDPDMFDSLNVLDSQFNLPASLELASMEKLLHIPEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYADMLDLAVQHIKGLQNQIENLHKDLENCTCGCK 345
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 7881928 7885803 - Bpe014427.1 Bpe14g01053 115362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe14g01053 345 CDD bHLH_AtbHLH_like 281 333 IPR045239 -
Bpe14g01053 345 PANTHER TRANSCRIPTION FACTOR BHLH129 22 341 - -
Bpe14g01053 345 Coils Coil 316 343 - -
Bpe14g01053 345 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 279 338 IPR036638 GO:0046983
Bpe14g01053 345 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 276 326 IPR011598 GO:0046983
Bpe14g01053 345 Pfam Helix-loop-helix DNA-binding domain 281 327 IPR011598 GO:0046983
Bpe14g01053 345 MobiDBLite consensus disorder prediction 103 125 - -
Bpe14g01053 345 SMART finulus 282 332 IPR011598 GO:0046983
Bpe14g01053 345 MobiDBLite consensus disorder prediction 1 22 - -
Bpe14g01053 345 MobiDBLite consensus disorder prediction 101 132 - -
Bpe14g01053 345 Gene3D - 277 342 IPR036638 GO:0046983
Bpe14g01053 345 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 22 341 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g01223 Bpe-Chr8:13826617 Bpe14g01053 Bpe-Chr14:7881928 4.68E-38 dispersed
Bpe10g00563 Bpe-Chr10:12621678 Bpe14g01053 Bpe-Chr14:7881928 1.16E-39 dispersed
Bpe14g00315 Bpe-Chr14:3127796 Bpe14g01053 Bpe-Chr14:7881928 9.28E-33 dispersed
Bpe14g01053 Bpe-Chr14:7881928 Bpe03g01138 Bpe-Chr3:30401401 2.18E-49 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22503 PF00010 HLH 4.70E-09 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe14g01053 - - jre:108987327 387.111