Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe14g01063 ATGGAGGTAAAGAATAAAGATAACTCAAAATTTAGAGCTACCAAGCTCGAGCCAAAACCCGATCTCCTGAGTTCTGCTCCTAGAAAAAGTACGCCGAGCAAAAAGATGCAATTGAAAGAGGAGAACAAGGTTCAGCTATCCACGAAGTCGGCAAAAGAGGAGACCAAAGTTCAGACCTCGAAGAAATCTGCCTCGAACGGAGACGTGGACTGGGAGAACTCAAATAAGAAAAGAATTTCAGCTGGAAAGAAATTGCCAAATGATTCAGCTCATAAAGGGCCTCTGGGAAATTTGGTAAAGATCCCATTGAATAATAGAAGATTGGCAGACAGTCATCTGTCTTGGGCGTCCCTCCCACCACCGCTTGCCAAGCTCGGAAAGGAAGTTTTGAAGCACAGAGATGCAGCTCAAACTGCTGCAGTAGAGGCAATGCAAGAAGCTTCTGTGGCAGAGAGCGTACTTCGATGTTTAAGCACATATTCTGAGCTAACCATTTCTGCCAAAGAGGACAACCCACAACCTACAGTAGAGCAGTTTTTGGCCCTCCATGCTAGCTTGACCCGTGCTCGTACCATCACCGACTCGCTTTTTAAAACTATTCCCTCGGAATCATCACCGGAAGGTGAAGAGGCGCCATCGGAAGAAACCGTAAAACTCACTTCGGACAGAAGAAAATTAGCAACTTTATGGATCCAAGCCGCTTTGGTCTCGAATCTATCGACTTTTTCGGTATACAGCAAGGAACCTAATTTGATTTCGGCTCCAAGTCAGAAAAACTCTGGGAGTCAACCTCTACTGGTTCTTGACAATTCGTCCAAAAACTCCTCATGCAAAACCCGTCAAGCGCACGGATCGAAGTCTGTATCCATGAAGACATCTCGTCGTATAGGTGATGGATCAACTATTAATCAAAAGCCTCATGTTCAACCTTTGCCTGAGTGGGTTAGAGGCAATGGCCTCAATGAAGCCATTGACTTGGCAGACATATTACGGACTCAATCTCAAGACTGGTTTCTCGGGTTTGTGGAGAAATTCCTTGACGCAGAAGTGGACACATCGGTTTTGTCAGATAACAGTCAAGTATCCGGGATTTTAACCCAGCTCAAGAGCGTAAATGATTGGCTGGACGAGATTGGATCAACCAAAGACGAAGTGGAAACCTTGCACGTTTCTTCCGAGACAATAGACAGGCTACGGAAGAAGATTTATGAGTATCTTCTCACACACGTCGAATCTGCAGCTGCTGCACTTGGGACTGGATCTCAACCTCCATATCAGGTCGATAAAAATGAACAGAAAGTGCGAAGATGA 1311 45.39 MEVKNKDNSKFRATKLEPKPDLLSSAPRKSTPSKKMQLKEENKVQLSTKSAKEETKVQTSKKSASNGDVDWENSNKKRISAGKKLPNDSAHKGPLGNLVKIPLNNRRLADSHLSWASLPPPLAKLGKEVLKHRDAAQTAAVEAMQEASVAESVLRCLSTYSELTISAKEDNPQPTVEQFLALHASLTRARTITDSLFKTIPSESSPEGEEAPSEETVKLTSDRRKLATLWIQAALVSNLSTFSVYSKEPNLISAPSQKNSGSQPLLVLDNSSKNSSCKTRQAHGSKSVSMKTSRRIGDGSTINQKPHVQPLPEWVRGNGLNEAIDLADILRTQSQDWFLGFVEKFLDAEVDTSVLSDNSQVSGILTQLKSVNDWLDEIGSTKDEVETLHVSSETIDRLRKKIYEYLLTHVESAAAALGTGSQPPYQVDKNEQKVRR 436
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 7952240 7954719 - Bpe014437.1 Bpe14g01063 115372

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe14g01063 436 PANTHER DUF936 FAMILY PROTEIN 1 434 - -
Bpe14g01063 436 MobiDBLite consensus disorder prediction 71 85 - -
Bpe14g01063 436 PANTHER EXPRESSED PROTEIN 1 434 IPR010341 -
Bpe14g01063 436 MobiDBLite consensus disorder prediction 33 59 - -
Bpe14g01063 436 MobiDBLite consensus disorder prediction 271 310 - -
Bpe14g01063 436 MobiDBLite consensus disorder prediction 1 17 - -
Bpe14g01063 436 MobiDBLite consensus disorder prediction 271 307 - -
Bpe14g01063 436 Pfam Plant protein of unknown function (DUF936) 3 417 IPR010341 -
Bpe14g01063 436 MobiDBLite consensus disorder prediction 1 93 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe14g01063 - - - zju:107421786 536.569
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe10g00837 Bpe-Chr10:14346375 Bpe14g01063 Bpe-Chr14:7952240 1.01E-08 dispersed
Bpe13g00722 Bpe-Chr13:13775274 Bpe14g01063 Bpe-Chr14:7952240 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g1277 . . . . . Bpe14g01063 . . . Cmo17g00591 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Blo02g00449 . Bda11g00478 Bda13g00251 . . Bma02g00967 . . . . . Cma17g00609 Car08g00175 Car17g00576 . Cpe17g01086 . . . . . . . . . . . . . . . . . Cme11g02453
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0009199 1 1 2 1 2 1 2 0 1 1 0 1 0 1 1 1 1 2 1 1 1 1 1 1 1 1 1 2 3 1 34
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe14g01063 Bpe_Chr14 FPKM 44.506397 51.793079 37.988487 39.83329 49.020988 49.951286 50.160534 45.138481 45.033108 46.759697