Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe14g01082 ATGAAAAAGTGGTATGGAGGAGTGTTGATCTTGGCTCTTGCTTCAATCTTGGTTTTCCGTTACGGCTTCGTGATCGTGGAGCCAGATAAGCAGTCTACTTATAACTTCTTCTTAATTCATCCTACTAATGAATCTCACGCAAGAAATAGTGACCCTGTCGAAGTGGAAGGAACAAAGCCATCGAAAAAGCTTCGTCTCGTGAACGTAGAAGGACTCAAAGATCTGATTTTTCCTGAAGGTATTCCTCGAGTGCAGTCAAAATCCTTACTCCTATGGCCCCATATGAACCTCCTGTTGTCGAGGTCCGATGGTTTACCTGAAACAGCTCAAGGGGTCAAGGAGGCTTCTATAGTATGGAAAGAATTGTTGGAGTTGATTAATGTGGAAAAGACTCTTAATTTCAGTGATGTTAACTCTTCAGAAGATAAAAAATGTCCTTTCTCGGTCAGCAAAAATGGCATTTTTATATTAAGCGATCACGATATTGTTATTGATCTCCCTTGTGGTATGGTTGAGGATTCTTCTATTTCACTTGTTGGAATACCCAATGGACTCAATGGAGGCTTCCAAGTCGAACTTTCCAGCTCCCAAATTTCAGGGGAGCCAAATCCTCCTACAATCCTGCATTACAATGTCAGTCTTCCTGGTGATGATTCAAATGAGGAGCCATTTGTCATTCAGAATACGTGGAATAATGAACTTGGATGGGGAAAACCAGAAAGATGTCCTGCAAATGGGTTAGTCGATGGACTTGTTCGATGCAATGGACTAGTTTTCAGAAACACTCTAGAAGACAATCTTAATAAAAGTAGTTCAGTCGATGATATCCTCACCAATGTTTCAAGAGGAAGTGCTCGTGAAAGCGCTAATTTTCCGTTTACTACTGGGAGTTTATTCACTGCCACCTTATGGCTTGGTTCGGAGGGGTTTCATATGACTGTCAATGGAAGGCATGAAACTTCTTTTGCATATGGTGAGAAATTCGAACCATGGGCAGTTAGTCGAGTCAAAATATCAGGTGGTTTAGATCTTTTTTCTATCTTGGCTAAAGGATTGCCAGTTTCTGAAGATCACGAGTTCGTCGTTGATGCTCCCATCCTTAAAGCGCCCCCCATTTCGAGGAAAAGGCTCATCATGTTGGTAGGAGTTTTCTCTACCGCAAACAATTTCGAGAGGCGAATGGCATTAAGGAGGTCTTGGATGCAGTTCAATGTTGTACGATCCGGAGATGTAGCTGTCAGATTTTTTACTGGCCTTCACAAGAATTCTCAAGTGAACTTGGAACTGTGGAGAGAAGCCAAAGTCTTCGGAGATATTCAGATTATGCCTTTCATCGATTATTACAGCCTGATAACGCAGAAAACGATCGCCATTTGTATTTTTGGGACCAAAATTCTTCCTGCAAAATATATCATGAAGACCGATGATGATGCTTTTGTCCGAATCGATGAAGTTCTTGCAGGCCTCAAGAGCAAGGCAGCAGCTCCTACTTGCCTCTTGTACGGTCTGATGTCCTTTGAATCGTCTCCCGATAGGGATAAAAGCAGCAAGTGGTATATTAGTGAAAAGGAATGGCCTCACGCTACGTACCCACCATGGGCACATGGTCCGGGTTACATCATCTCCCGAGACATTGCGAAATTCATCGTCCAGGGCCATCAAGATGGAGTCCTCCAGCTTTTCAAACTAGAAGATGTGGCCGTGGGAATATGGGTGCAGCAATTCAAGAACAGTTGTAAAGAAATCAATTATGTAAACGACAACAAGTTTTTCAATGCCGGATGCGAGTCCAACTACGTGGTCGCCCACTACCAGAGCCCGAGGTTGGTTTTATGTCTTTGGGAGAAGCTGCAGAAGGTGCATCAGCCCATCTGCTGCGAGTAA 1884 43.31 MKKWYGGVLILALASILVFRYGFVIVEPDKQSTYNFFLIHPTNESHARNSDPVEVEGTKPSKKLRLVNVEGLKDLIFPEGIPRVQSKSLLLWPHMNLLLSRSDGLPETAQGVKEASIVWKELLELINVEKTLNFSDVNSSEDKKCPFSVSKNGIFILSDHDIVIDLPCGMVEDSSISLVGIPNGLNGGFQVELSSSQISGEPNPPTILHYNVSLPGDDSNEEPFVIQNTWNNELGWGKPERCPANGLVDGLVRCNGLVFRNTLEDNLNKSSSVDDILTNVSRGSARESANFPFTTGSLFTATLWLGSEGFHMTVNGRHETSFAYGEKFEPWAVSRVKISGGLDLFSILAKGLPVSEDHEFVVDAPILKAPPISRKRLIMLVGVFSTANNFERRMALRRSWMQFNVVRSGDVAVRFFTGLHKNSQVNLELWREAKVFGDIQIMPFIDYYSLITQKTIAICIFGTKILPAKYIMKTDDDAFVRIDEVLAGLKSKAAAPTCLLYGLMSFESSPDRDKSSKWYISEKEWPHATYPPWAHGPGYIISRDIAKFIVQGHQDGVLQLFKLEDVAVGIWVQQFKNSCKEINYVNDNKFFNAGCESNYVVAHYQSPRLVLCLWEKLQKVHQPICCE 627
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 8104649 8108677 + Bpe014456.1 Bpe14g01082 115391

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe14g01082 627 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 74 619 IPR002659 GO:0006486|GO:0016020|GO:0016758
Bpe14g01082 627 Gene3D - 371 606 - -
Bpe14g01082 627 SUPERFAMILY Concanavalin A-like lectins/glucanases 163 350 IPR013320 -
Bpe14g01082 627 Gene3D - 159 348 - -
Bpe14g01082 627 Pfam Galactosyltransferase 391 576 IPR002659 GO:0006486|GO:0016020|GO:0016758
Bpe14g01082 627 PANTHER BETA-1,3-GALACTOSYLTRANSFERASE GALT1 74 619 - -
Bpe14g01082 627 Pfam Galactoside-binding lectin 164 348 IPR001079 GO:0030246
Bpe14g01082 627 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 162 350 IPR001079 GO:0030246
Bpe14g01082 627 SMART Gal_bind_lectin_2 166 349 IPR001079 GO:0030246
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe14g01082 K20843 GALT2S; hydroxyproline O-galactosyltransferase 2/3/4/5/6 [EC:2.4.1.-] - qsu:112022347 848.966
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe10g00876 Bpe-Chr10:14560026 Bpe14g01082 Bpe-Chr14:8104649 0 dispersed
Bpe12g00565 Bpe-Chr12:11492821 Bpe14g01082 Bpe-Chr14:8104649 1.02E-100 dispersed
Bpe14g01082 Bpe-Chr14:8104649 Bpe03g00791 Bpe-Chr3:27877294 9.31E-09 dispersed
Bpe14g01082 Bpe-Chr14:8104649 Bpe11g01643 Bpe-Chr11:12573338 0 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g220 . . . . . Bpe14g01082 . . . . . . Car06g01342 . . Cpe08g00138 . Bhi01g01110 . . . Hepe05g1357 . Lcy11g1319 . . . . . . . . . . . Lsi05g01401 . . Cme06g00818 . . . . . . Bma02g00943 . . Cmo06g01573 . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0011276 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 1 1 1 1 1 1 2 1 1 31
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe14g01082 Bpe_Chr14 FPKM 0.0 0.0 0.0 0.287981 0.413835 0.0 0.0 0.597836 0.421816 0.0