Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe14g01084 ATGGGTTTTTCAAACGTTGCTTTTCTGTCTGTTTTCTTGATGGCCTTCACTGGCCTCACTTCGGCCGTCGTCTACGACGTCGGTGACGCCGCTGGCTGGACCAAAAAGGGCTCCGTCAATTACACTTCCTGGGCCGCTTCTAAGAAGTTCTTCGTCGGAGACACCATAGTTTTCAAGTACGAGAAAGGCGAAGAGTTGCTGCGAGTGAAGCACGGTGATTATAAGAAATGCGACACAAGGAATCCCCTAGCCAGCTTCACCTCCGGGAAAGACTCTTTTCCGCTGAAGAAGCCAACCCATATTTACTACATCAGCGCCGTCTACGGCGACTGCATGGCCGGACAAAAGGTCGACATCAAGGTCGTCTCCGACGCGCATTCTACGCCCACTCCATCTCCTTCTCCCGCCGTCCCAAACTCTCCGTCTTTTGCGCCGGCGCCTAGTCCTAGCGCTTCTCCTTCCCTTCGTGCTGCCGGTGGACTGATTTCTATCTGCATTTTGGCTATGATCCTCCTTTTTGTCTAA 525 52.76 MGFSNVAFLSVFLMAFTGLTSAVVYDVGDAAGWTKKGSVNYTSWAASKKFFVGDTIVFKYEKGEELLRVKHGDYKKCDTRNPLASFTSGKDSFPLKKPTHIYYISAVYGDCMAGQKVDIKVVSDAHSTPTPSPSPAVPNSPSFAPAPSPSASPSLRAAGGLISICILAMILLFV 174
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 8116631 8117260 - Bpe014458.1 Bpe14g01084 115393

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe14g01084 174 Gene3D - 21 127 IPR008972 -
Bpe14g01084 174 CDD Phytocyanin 23 121 - -
Bpe14g01084 174 ProSiteProfiles Phytocyanin domain profile. 23 123 IPR003245 GO:0009055
Bpe14g01084 174 PANTHER BLUE COPPER PROTEIN 7 137 IPR039391 GO:0009055
Bpe14g01084 174 Pfam Plastocyanin-like domain 33 115 IPR003245 GO:0009055
Bpe14g01084 174 PANTHER BNAA09G04270D PROTEIN 7 137 - -
Bpe14g01084 174 SUPERFAMILY Cupredoxins 22 122 IPR008972 -
Bpe14g01084 174 MobiDBLite consensus disorder prediction 131 148 - -
Bpe14g01084 174 MobiDBLite consensus disorder prediction 124 149 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe14g01084 - - - mus:103988230 120.938
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe13g00702 Bpe-Chr13:13624930 Bpe14g01084 Bpe-Chr14:8116631 5.22E-71 dispersed
Bpe14g00466 Bpe-Chr14:4192829 Bpe14g01084 Bpe-Chr14:8116631 2.15E-25 dispersed
Bpe14g01084 Bpe-Chr14:8116631 Bpe14g00646 Bpe-Chr14:5254353 9.93E-22 dispersed
Bpe13g00709 Bpe-Chr13:13669585 Bpe14g01084 Bpe-Chr14:8116631 5.60E-73 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g179 . . . . . Bpe14g01084 . . . . . . . . . Cpe08g00176 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cla05g00663 Cam05g0727 Cec05g0734 Cco05g0734 Clacu05g0720 Cmu05g0685 Cre05g0759 . Csa03g01480 . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0016221 1 0 1 2 3 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 8
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe14g01084 Bpe_Chr14 FPKM 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0