Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe14g01089 ATGGCGAAGCACGAAGATCTTCCCATCCCCGTCTTCTCAACCTTGGAGCCTGTCTACGGCGGCGGCTCTCAGCTCGAAGAAGCTCAGCTTCGATTCGATTTTTTGAAATCCAAGTTTCTTCAAGTATTTGGTAGAGTGAACTTGATAGGAGAGCACATTGATTACGAGGGATACTCGGTGTTGCCCATGGCAATTCGGCAAGATACTATTGTCGCTATAGGGAAGAGTCATGGTGATGAAAAGCTTCTCAGAATTGCTAATGTGAATGATAAATATTCCATTTGCTCTTATCCTGCCGATCATGATCAGGAAATTGATTTGAAGAATCACAAATGGGGGCATTACTTTATTTGTGGGTACAAAGGCTATAATGAATATGCTAGATCAAAAGGAATTGATGTTGGTTTACCAGTCGGGCTAGATATTCTTGTCGATGGAACCGTTCCTACAGGTTCTGGGCTATCAAGCTCTGCAGCATTTGTTTGCTCTTCCACTATTGCTATTATGGCTGCCTTTGATGTGAATTTCCCAAAGAAAGAAGTTGCCCAGCTTACATGTGAATGTGAAAGACACATTGGTACACAATCTGGTGGAATGGATCAGGCAATATCCGTTATGGCCAAATCAGGATTTGCGGAGTTGATTGATTTCAATCCTATCCGAGCCACTGATGTGAAACTTCCTGCTGGGGGAACTTTTATTATAGCTCATTCTCTGGCGGAATCTCAGAAAGCTGTCACTGCTGCTACAAATTACAATAATAGAGTTGTTGAATGTCGGCTGGCTGCAATTGTACTTGGGATAAAGCTTGGAATGAAACCACAAGAAGCAATATCAAAAGTGAAAACACTGTCTGATGTTGAAGGGCTGTGTCTATCATTTGCTTCTAGTCGCGGCTCTTCAGATCCTGTCCTTGCTGTACAGGCACTATTGAAGGAGGAACCTTATACTGCTACAGAGATTGAGGAAATCACAGAAGAAAATCTACCATCAGTGTTGGGCAATTCTCCTACTTCATTGGAAGTGTTGAAAGCTGCAAAGTACTTCAAGTTGTATCAGAGAGCCTCTCATGTCTATTCTGAAGCCAGAAGAGTTTATGCTTTTAAGGACACTGTGTCATCAAATTTAGACGAGGAGGACTTGTTAAAGAAGCTTGGTGAACTTATGAATGACAGTCATTACAGCTGCAGTGTCCTTTATGAGTGCAGCTGCCCAGAGTTGGAAGAACTAGTAAATATATGCCGGGACAATGGTGCTTTTGGGGCGAGGCTAACCGGAGCCGGATGGGGGGGTTGTGCAGTTGCATTGGTGAAAGAGAGCATAGTCCCCCAATTTATCCTTAATTTAAAGGAAAGCTACTACCAATCAAGAATTGATAAAGGGATCATCGGCAAGAACGATCTTGGTCTCTATATCTTTGCTTCCAAGCCATCAAGTGGAGCTGCAATATTCAAGTTTTAA 1461 42.71 MAKHEDLPIPVFSTLEPVYGGGSQLEEAQLRFDFLKSKFLQVFGRVNLIGEHIDYEGYSVLPMAIRQDTIVAIGKSHGDEKLLRIANVNDKYSICSYPADHDQEIDLKNHKWGHYFICGYKGYNEYARSKGIDVGLPVGLDILVDGTVPTGSGLSSSAAFVCSSTIAIMAAFDVNFPKKEVAQLTCECERHIGTQSGGMDQAISVMAKSGFAELIDFNPIRATDVKLPAGGTFIIAHSLAESQKAVTAATNYNNRVVECRLAAIVLGIKLGMKPQEAISKVKTLSDVEGLCLSFASSRGSSDPVLAVQALLKEEPYTATEIEEITEENLPSVLGNSPTSLEVLKAAKYFKLYQRASHVYSEARRVYAFKDTVSSNLDEEDLLKKLGELMNDSHYSCSVLYECSCPELEELVNICRDNGAFGARLTGAGWGGCAVALVKESIVPQFILNLKESYYQSRIDKGIIGKNDLGLYIFASKPSSGAAIFKF 486
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 8141064 8144807 - Bpe014463.1 Bpe14g01089 115398

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe14g01089 486 ProSitePatterns Galactokinase signature. 44 55 IPR019741 -
Bpe14g01089 486 PRINTS Mevalonate kinase family signature 42 66 - -
Bpe14g01089 486 PRINTS Mevalonate kinase family signature 146 168 - -
Bpe14g01089 486 PRINTS Mevalonate kinase family signature 421 438 - -
Bpe14g01089 486 PRINTS Mevalonate kinase family signature 188 207 - -
Bpe14g01089 486 PIRSF Galactokinase 26 485 IPR006206 GO:0005524|GO:0005737|GO:0016301|GO:0016773
Bpe14g01089 486 Gene3D - 251 401 - -
Bpe14g01089 486 SUPERFAMILY GHMP Kinase, C-terminal domain 232 460 IPR036554 -
Bpe14g01089 486 ProSitePatterns GHMP kinases putative ATP-binding domain. 148 159 IPR006203 GO:0005524
Bpe14g01089 486 Pfam Galactokinase galactose-binding signature 44 75 IPR019539 -
Bpe14g01089 486 Gene3D - 226 455 - -
Bpe14g01089 486 TIGRFAM gal_kin: galactokinase 38 455 IPR000705 GO:0004335|GO:0005524|GO:0006012|GO:0046835
Bpe14g01089 486 Pfam GHMP kinases N terminal domain 141 206 IPR006204 GO:0005524
Bpe14g01089 486 SUPERFAMILY Ribosomal protein S5 domain 2-like 36 229 IPR020568 -
Bpe14g01089 486 Gene3D - 38 225 IPR014721 -
Bpe14g01089 486 Pfam GHMP kinases C terminal 382 454 IPR013750 -
Bpe14g01089 486 PRINTS Galactokinase signature 353 367 IPR000705 GO:0004335|GO:0005524|GO:0006012|GO:0046835
Bpe14g01089 486 PRINTS Galactokinase signature 44 62 IPR000705 GO:0004335|GO:0005524|GO:0006012|GO:0046835
Bpe14g01089 486 PRINTS Galactokinase signature 139 157 IPR000705 GO:0004335|GO:0005524|GO:0006012|GO:0046835
Bpe14g01089 486 PANTHER BNAA01G32760D PROTEIN 1 485 - -
Bpe14g01089 486 PANTHER MEVALONATE KINASE/GALACTOKINASE 1 485 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe14g01089 K18674 GALK2; N-acetylgalactosamine kinase [EC:2.7.1.157] - zju:107407595 828.935
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g44 . . . . . Bpe14g01089 . . . . Cma06g01572 Cma14g01579 Car06g01336 Car14g01390 Sed02g1128 Cpe08g00143 Cpe03g01318 Bhi01g01101 Tan10g1088 Cmetu06g1064 . Hepe05g1365 . Lcy11g1328 . . . . . . . . Cone15ag0720 . . Lsi05g01410 . . Cme06g00801 Blo02g00471 Blo07g00132 . Bda13g00226 . . Bma02g00937 . . Cmo06g01566 Cmo14g01611 . . . . . . . . . . . . . Cla05g00717 Cam05g0784 Cec05g0790 Cco05g0786 Clacu05g0774 Cmu05g0739 Cre05g0813 . Csa03g01530 Chy06g00767 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0005121 1 1 2 2 1 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 2 1 1 1 1 1 4 1 1 41
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe14g01089 Bpe_Chr14 FPKM 12.463029 14.962128 45.838398 47.690216 35.388332 30.973948 38.929337 24.423758 26.539606 29.020184