Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe14g01101 GAAGAGAGGGAGATGGAGGGAGACAGGAGAGTCGGAGTGGCCGTCGATTTCTCTCCGTGTAGCAAGAGCGCGCTCGTGTGGGCTGTCGATAACGTTGTCCGGAAAGGCGATCATCTTGTACTCATCACAGTTCGCCCCGAAGGAAACTACGAAGATGGCGAGATCCAGCTCTGGGAAGCCACCGGATCTCCTTTCATTCCTCTGCCGGATTTCTCTGATCCTCACGTCATGAAGAAGTATGGCGTCAAGCCTGATGCCGAAACCTTGGATATTGTTATCACTGCTGCCAAGCAAAAAGAGCAGGTAACGGTGCTTCTGAAGATTTACTGGGGAGATGCTCGTGAGAAGATATGTGAAGCCATTGATAAAATCCCTCTGAGCTGTCTTATCATTGGTAATAGAGGTCTTGGCAAGATTAAGAGAGCTATACTGGGAAGTGTGAGCAACTACGTTGTGAGTAATGCTTCCTGTCCTGTAACTGTGGTGAAGGGCGGCGGAGCTCCGGGAAGCTAG 513 50.68 EEREMEGDRRVGVAVDFSPCSKSALVWAVDNVVRKGDHLVLITVRPEGNYEDGEIQLWEATGSPFIPLPDFSDPHVMKKYGVKPDAETLDIVITAAKQKEQVTVLLKIYWGDAREKICEAIDKIPLSCLIIGNRGLGKIKRAILGSVSNYVVSNASCPVTVVKGGGAPGS 170
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 8209770 8210891 + Bpe014475.1 Bpe14g01101 115410

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe14g01101 170 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 9 165 - -
Bpe14g01101 170 Pfam Universal stress protein family 9 163 IPR006016 -
Bpe14g01101 170 Gene3D HUPs 6 168 IPR014729 -
Bpe14g01101 170 CDD USP_Like 10 162 - -
Bpe14g01101 170 PANTHER IMP2'P 8 164 - -
Bpe14g01101 170 PRINTS Universal stress protein signature 8 26 IPR006015 -
Bpe14g01101 170 PRINTS Universal stress protein signature 141 163 IPR006015 -
Bpe14g01101 170 PRINTS Universal stress protein signature 123 135 IPR006015 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe14g01101 - - - egr:104451738 273.863
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bpe13g00693 Bpe14g01101 CCT
Bpe04g01113 Bpe14g01101 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe11g00512 Bpe-Chr11:3960310 Bpe14g01101 Bpe-Chr14:8209770 1.38E-16 dispersed
Bpe14g01101 Bpe-Chr14:8209770 Bpe14g00490 Bpe-Chr14:4371851 8.80E-18 dispersed
Bpe14g01127 Bpe-Chr14:8391162 Bpe14g01101 Bpe-Chr14:8209770 3.69E-11 dispersed
Bpe02g00875 Bpe-Chr2:6729421 Bpe14g01101 Bpe-Chr14:8209770 6.30E-52 transposed
Bpe07g00426 Bpe-Chr7:4793868 Bpe14g01101 Bpe-Chr14:8209770 1.15E-08 transposed
Bpe08g00088 Bpe-Chr8:483189 Bpe14g01101 Bpe-Chr14:8209770 1.20E-49 transposed
Bpe13g00693 Bpe-Chr13:13572972 Bpe14g01101 Bpe-Chr14:8209770 6.63E-93 wgd
Bpe14g01101 Bpe-Chr14:8209770 Bpe04g01113 Bpe-Chr4:9009885 2.56E-88 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g76 . Blo12g00084 Bda03g01174 . Bpe04g01113 Bpe14g01101 . . . . . Cma14g01591 Car06g01325 Car14g01405 Sed12g0777 Cpe08g00153 Cpe03g01331 Bhi01g01084 Tan10g1071 Cmetu06g1226 . Hepe05g1388 . Lcy11g1343 . . . . . . . Cone14ag0723 Cone15ag0732 . . Lsi05g01588 . . Cme06g00783 Blo02g00478 Blo07g00150 Bda11g00504 Bda13g00215 . Bpe13g00693 . Bma06g01471 . . Cmo14g01623 . . . . . . . . . . . . . Cla05g00701 Cam05g0767 Cec05g0776 Cco05g0769 Clacu05g0757 Cmu05g0723 Cre05g0797 . Csa03g01513 Chy06g00750 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0008854 3 1 1 1 2 1 2 1 1 1 1 1 0 1 1 0 1 2 2 1 1 1 1 1 1 1 1 1 1 1 34
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe14g01101 Bpe_Chr14 FPKM 3.881254 3.862391 1.548318 2.419569 9.263195 8.987572 8.490685 0.0 0.0 0.0