Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe14g01122 ATGATTAACGAAGACCATCTTCAAGTCTTTGATTCTTCGCTCCATTTTCTTGTCGTACCAGGGAAACTTTACCCATCGGCCAGTATAGCTTCATGGACAAATCTGGTTAATGAGTTTGACGCAGGAAAAAAAGCTTCGATTTCAATACTTCCGAAAGATGCATTTGGGAATAATATCTCTTCTGTCGATGAACCAAATGCATTTAATTTTACTCTGTTTACTTATCATGCAAATGACTCCATTGCAAGACTTTCTAACACGACTAACATGGGATGGAATGAGTTTGGTTATATTAATATTGAATTTGTTGTCGTTCTGGCTGGAAATTTCTTGTTGCATGTAGAATGTGGAAACCAAACCTTGAGAGAGGCTCCTTTATCGTTCAAGGTGAATCCAGGACCATTAGAGGTCTCCAATTGTGTGGTTCACTGGGACTTTGAACCGCATGCATGGCAGTTATTCTCTAAGATGGAAATATTTGTACTCCAACGAGATAAATTTGGCAACTTTGTTCCTGGACTCTATGCATTCGATGCTGAAATTGTCAACAGAGAAAAAAATTTATCAATACCTGTATCTGATTTACATTTTCGAGAAGTTGAGAGTGGAATGCAGCTATTTTCTTTGAGCAATTTGGAAGCAGGAAATTTCTTACTAACAATATCAGATGTTGAGCACAATGTAATTATATCCAACATGCCTTATGCTTATACAGTCTACATAGGTTATTGTGATGGATTACAAAGTGTTGTTAATGGAACTGGCATCAATAACTCAGTTGCTGGGGAGTTATCAGAGTTCTATGTTTATTTGAATGATGTTTATCAATATCCCTCCCCAATTGAACTACAGTGGCTTCAAATACAGATTGTAAGGGAGATCGATGCTTATACTTTGTTACCCAACATACATCCAATTAATGGTACACTCATGCTTTTGAAATTATATACTTTAGTCACTAATGATGTAATGTTTTTGATCCAGTCTGCATCAGACTCGAAAATTCTGGCCAATGCTTTTGATGTGATTTATACACCTTACAAGAGTGGGGTTTATAGTATTTTTGTGTTTTGTGGAAATATTCTTTTGAATGGCGGTCATTCAATCAAAAAGGAAGTAACATCAGGTGGAGTTAACATATCACTCTCGGGAGTTGTGAAATTTTCTTCCAAGGTTCCTAAGCTGGCTGAGAATGAAATTGTAGTGCAGCTTATGGATTCATTTTGGAACCCAGTTCTCTCTCAACAATCAAAACTGAAACTCGATCTTGTTTCTTTCAACACATCTGGTTTTATAAACCTGAATTTTGTGGATAACAATAATGGGTCATACACTGGTTATTATACGGCCAAGAATGTCGGAACATATGAGATTTGTGCTTCCTTTGATGGAAACCATTTATCACCCTGCCCCTTCAGAGTCAATGTTTATGGTGCTGAATATTTCCCCAATGCATTCAATGATACTGTTTCTGTGTGGGAGGACGAGTCAATTGCATTTGACATTCTAGCAAATGACTACTTCGCTGGTGACAGTGCTATTATTGTTTCACTAACAAACCCAAATCATGGTTCTCTCATACAGTATGAAAGGCTTGTTAGATATACCCCACATAAGGATTATTATGGGAATGATTTCTTCACGTATGTGATATCTGACATAAATGGAAATCTCGCTTTTGCTTCTGTGAGCATTTCTGTTCTCAGTATACCACCCCAATTTGCTTCTTTTCCAAGTGAACTACTAGCAACTGAAGATATCATAAGTCCAAGAATTGGTGGCTTCTCCGGCTTTGAGATACGATATTCAGATGGGGCGGAGAAAATTTCTGTGAATGTTAGTGCCCATTCAGGGAGCATCTTTCTTTCACCTATTTTGATGCAATTTGATCGGTCGATGTGGTGTAATTTCTCTGTTAGTAATATGGATGAAAAATGGAAGGATTTAAATTTAGAAGGTTGTTTGGAAGTGATAAACACTGCTCTTCAATCAATTCAGTATCTCGGAAAGGAGAACTTCTGTGGTACTGACACAATCAGAGTCTCAACTAGGAATAAGAACGGGATGAATACATTGGATGTTCCAATTTTCGTAGAGCCAATAAATGATGTTCCATATATTCAGGCCCCTGAAATCATAATCTTGAAGAGTGATGATGAAGAGTCACTTATATTTGACAAAGAAAGAGACAAATATAATTTTTCCGTCGGAGATGCAGATATCTTTACCTTTCCTGCAGGTGGTGAGGCCAACTTCAAGGTCATTTTTTCCATGGAAGTCAATGATGGAATTTTAGTCACAAATCTTCCGGCCGAGCTCATCAATACAACTGAACTGAAGCTAAAGAATATTCAGCAGTGGCAGCCTCTTCAGACATATGTTTCCATTGCCAAGCATTTTACAGTAAAAGCCAAAGGAATTAGATTCAGGGGAACACTTCATCATTGCAATGATATTATGCAAAAACTAGTATATCGTGGCAGCAAACATGGTACTTTCTTGACAATGACAGTGAATGATATGGGAAACTACGGATGTTATCCAGATTGTACTGACAAAATGTCGGTGCCTCTATTCGCTGAAGCTACTATCCAACTTATAAGAAGGAAGCCAATGACAGCAGTCTTGGGTCGATCATTGGGGTCAGCAATAGCAATTGAATTCGTAGTGATTTTCACTCTTGCCATACTGCTTATATTTTTCACATGCAAATGTGCAATCCTTCTCGTTCACGAAAGAGTAAAAGAAAAGAGTAGCGAATTGCCGAATTCCCTGAAAAAGAATGTACGTACCAGTTGA 2799 37.69 MINEDHLQVFDSSLHFLVVPGKLYPSASIASWTNLVNEFDAGKKASISILPKDAFGNNISSVDEPNAFNFTLFTYHANDSIARLSNTTNMGWNEFGYINIEFVVVLAGNFLLHVECGNQTLREAPLSFKVNPGPLEVSNCVVHWDFEPHAWQLFSKMEIFVLQRDKFGNFVPGLYAFDAEIVNREKNLSIPVSDLHFREVESGMQLFSLSNLEAGNFLLTISDVEHNVIISNMPYAYTVYIGYCDGLQSVVNGTGINNSVAGELSEFYVYLNDVYQYPSPIELQWLQIQIVREIDAYTLLPNIHPINGTLMLLKLYTLVTNDVMFLIQSASDSKILANAFDVIYTPYKSGVYSIFVFCGNILLNGGHSIKKEVTSGGVNISLSGVVKFSSKVPKLAENEIVVQLMDSFWNPVLSQQSKLKLDLVSFNTSGFINLNFVDNNNGSYTGYYTAKNVGTYEICASFDGNHLSPCPFRVNVYGAEYFPNAFNDTVSVWEDESIAFDILANDYFAGDSAIIVSLTNPNHGSLIQYERLVRYTPHKDYYGNDFFTYVISDINGNLAFASVSISVLSIPPQFASFPSELLATEDIISPRIGGFSGFEIRYSDGAEKISVNVSAHSGSIFLSPILMQFDRSMWCNFSVSNMDEKWKDLNLEGCLEVINTALQSIQYLGKENFCGTDTIRVSTRNKNGMNTLDVPIFVEPINDVPYIQAPEIIILKSDDEESLIFDKERDKYNFSVGDADIFTFPAGGEANFKVIFSMEVNDGILVTNLPAELINTTELKLKNIQQWQPLQTYVSIAKHFTVKAKGIRFRGTLHHCNDIMQKLVYRGSKHGTFLTMTVNDMGNYGCYPDCTDKMSVPLFAEATIQLIRRKPMTAVLGRSLGSAIAIEFVVIFTLAILLIFFTCKCAILLVHERVKEKSSELPNSLKKNVRTS 932
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 8352990 8357893 - Bpe014497.1 Bpe14g01122 115431

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe14g01122 932 SUPERFAMILY E set domains 244 365 IPR014756 -
Bpe14g01122 932 Pfam Cadherin-like domain 492 567 IPR041690 -
Bpe14g01122 932 PANTHER JITTERBUG, ISOFORM N 75 874 - -
Bpe14g01122 932 Pfam Filamin/ABP280 repeat 243 360 IPR017868 -
Bpe14g01122 932 Pfam Filamin/ABP280 repeat 398 473 IPR017868 -
Bpe14g01122 932 Gene3D - 483 566 - -
Bpe14g01122 932 PANTHER JITTERBUG, ISOFORM N 75 874 IPR044801 GO:0030036|GO:0051015
Bpe14g01122 932 SUPERFAMILY E set domains 398 479 IPR014756 -
Bpe14g01122 932 ProSiteProfiles Filamin/ABP280 repeat profile. 432 476 IPR017868 -
Bpe14g01122 932 Gene3D Immunoglobulins 395 482 IPR013783 -
Bpe14g01122 932 Gene3D Immunoglobulins 22 131 IPR013783 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe14g01122 - - - qsu:112028221 1216.45
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g162 . . . . . Bpe14g01122 . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone7ag0134 Cone4ag0139 . . . . Blo02g00498 . . Bda13g00194 . . Bma02g00906 . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0016220 1 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 1 0 0 0 0 0 0 0 1 8
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe14g01122 Bpe_Chr14 FPKM 1.7369 1.743093 2.819999 2.795394 7.45617 7.262064 9.792564 2.133297 1.901255 1.868997