Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe14g01140 ATGTTGAAGTCTTCAACCATAGTCTTGGCAACTGTAGGAGGGATTGTGTTTGCGGGTTTACTCATCGGATTTGTCTGGTTTTACAAGAAAATGTGTAAAAATGTTTCGAATAGGAATTCTGATACCGGCTCCTCCGACCCGTCTGCCCTCGTGGAGTGGAATAAAGGCGGGCCGAGCTCGGAATCGGCTGTTCCTTCCGCCGGAATTCCGGGAGCCAGGCAATTCGCGATGGAAGAGCTGGAGCAAGCTACTAAGAAGTTCGATGAAAGTAATCTCATTGGCTATGGAAGTTTTGGACCTGTGTATAAAGGTTTACTCAGAGATGGGACTGTTGTAGCCATTAAAAGGCGTCCAGGCTCTCCGAGTTTGGAATTCATTGAAGAGGTTGCGAGTTTATCAGAGATTCGGCATCGAAATTTAGTTTCTCTCTTGGGTTACTGCCAGGAAAGAGGAAGTCAAATTCTGGTTTTCGAATATCTACCGAATGGAAACATGTGCAATCACCTTTACGGTTCTACATCAGATCCTTCGACTAAATTGGAGTTCAAGCAAAGGCTATCCATAGCTCTTGGTGCTGGTAAAGCAGGTTTGAGCCATTTGCATAGCCTTAAACCTCCATTGCTGCACAATAACTTCAAAACGGCTAATGTTCTGGTTGACGAAAACTTCATTGCCAAGGTTTCAGATGCAGGAATCTCGAAATTACTCGAAAAGATAGAAGAAGCAGGTCCATCTCACTCACCTGGCATTGGCGCTTTTCGAGATCCAGAGCTCAGCCTGTCTGGCTCAGCTTCAGAAAAGAGCGATGTTTATGGATTCGGCGTGTTTCTTTTGGAGCTTGTAACTGGACACGAGGCTGTGGATACTGACTCGTTCGAATCAAACGAAAGATTGTTTCAATGGGTGGATTCTCAACTGAACTTGAACGAGTTTGTGGATGCTCGGCTGGTCGGAAGGTTCACGTTAGAAGGAATGAGGGATCTGATCAGGCTGATCTTGAACTGCATGAGTTTTCCGGCAAAAAGGCGGCCGAAAATGGAAGCGATCGTGGATGAGCTAGAGAGGATTCAAGAGAAAGAAATGGCTCTAACGACAGTCATGGGGGAGGGAACAGCCAAAATTACTCTAGGAAGTGAGCTATTCACGTCATAA 1152 45.75 MLKSSTIVLATVGGIVFAGLLIGFVWFYKKMCKNVSNRNSDTGSSDPSALVEWNKGGPSSESAVPSAGIPGARQFAMEELEQATKKFDESNLIGYGSFGPVYKGLLRDGTVVAIKRRPGSPSLEFIEEVASLSEIRHRNLVSLLGYCQERGSQILVFEYLPNGNMCNHLYGSTSDPSTKLEFKQRLSIALGAGKAGLSHLHSLKPPLLHNNFKTANVLVDENFIAKVSDAGISKLLEKIEEAGPSHSPGIGAFRDPELSLSGSASEKSDVYGFGVFLLELVTGHEAVDTDSFESNERLFQWVDSQLNLNEFVDARLVGRFTLEGMRDLIRLILNCMSFPAKRRPKMEAIVDELERIQEKEMALTTVMGEGTAKITLGSELFTS 383
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 8500635 8502429 - Bpe014516.1 Bpe14g01140 115449

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe14g01140 383 Gene3D Phosphorylase Kinase; domain 1 59 159 - -
Bpe14g01140 383 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 3 383 - -
Bpe14g01140 383 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 3 383 - -
Bpe14g01140 383 SUPERFAMILY Protein kinase-like (PK-like) 64 354 IPR011009 -
Bpe14g01140 383 Pfam Protein tyrosine and serine/threonine kinase 91 353 IPR001245 GO:0004672|GO:0006468
Bpe14g01140 383 ProSiteProfiles Protein kinase domain profile. 87 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe14g01140 383 MobiDBLite consensus disorder prediction 38 66 - -
Bpe14g01140 383 Gene3D Transferase(Phosphotransferase) domain 1 160 373 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe14g01140 - - - qsu:112020626 528.48
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe14g01140 Bpe-Chr14:8500635 Bpe14g01348 Bpe-Chr14:10762313 3.22E-111 dispersed
Bpe14g01140 Bpe-Chr14:8500635 Bpe01g00156 Bpe-Chr1:869534 7.82E-55 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g341 . . . . . Bpe14g01140 . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone7ag0165 Cone4ag0161 . . . . Blo02g00519 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0016693 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 1 6
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63736 PF07714 PK_Tyr_Ser-Thr 4.00E-33 CL0016 Bpe PK
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe14g01140 Bpe_Chr14 FPKM 80.83548 87.796516 250.933746 247.410065 33.531025 35.876068 38.149921 61.895863 61.875275 68.074013