Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe14g01151 AGATTGACACAGAGAGGGCCCTTGACATTGTTTTTGCAGGCCAAACCCGAGACAGTGGTCAAAGTATGTGACATAGTAAGGAAGCAGCTAGCTTTACCTGATGATTCTGCTGTCTCCGGGGAGTCAAAGTTTGCCTCACTTGGAGCTGACTCTCTCGATACGGTTGAGATTGTGATGGGGCTTGAAGAAGAGTTCGGAATCAGCGTGGAGGAAGAAAGTGCCCAGAGCATTGCTACTGTCCAGGATGCAGCGGACCTGATTGAGATGCTCATTGAGAAGAAGGGTGCTTAA 291 49.14 RLTQRGPLTLFLQAKPETVVKVCDIVRKQLALPDDSAVSGESKFASLGADSLDTVEIVMGLEEEFGISVEEESAQSIATVQDAADLIEMLIEKKGA 96
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 8576897 8577595 + Bpe014526.1 Bpe14g01151 115460

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe14g01151 96 Gene3D - 14 95 IPR036736 -
Bpe14g01151 96 Pfam Phosphopantetheine attachment site 21 87 IPR009081 -
Bpe14g01151 96 Hamap Acyl carrier protein [acpP]. 17 91 IPR003231 GO:0006633
Bpe14g01151 96 ProSitePatterns Phosphopantetheine attachment site. 46 61 IPR006162 -
Bpe14g01151 96 SUPERFAMILY ACP-like 17 91 IPR036736 -
Bpe14g01151 96 SMART Phosphopantetheine attachment site 19 73 IPR020806 GO:0031177
Bpe14g01151 96 ProSiteProfiles Carrier protein (CP) domain profile. 16 91 IPR009081 -
Bpe14g01151 96 PANTHER ACYL CARRIER PROTEIN 2, CHLOROPLASTIC-RELATED 11 95 - -
Bpe14g01151 96 PANTHER ACYL CARRIER PROTEIN 11 95 IPR044813 GO:0000036|GO:0006633
Bpe14g01151 96 TIGRFAM acyl_carrier: acyl carrier protein 17 88 IPR003231 GO:0006633
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe14g01151 - - - qsu:111987702 142.51
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bpe13g00646 Bpe14g01151 CCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe11g01353 Bpe-Chr11:10145316 Bpe14g01151 Bpe-Chr14:8576897 4.92E-47 dispersed
Bpe12g00460 Bpe-Chr12:10343710 Bpe14g01151 Bpe-Chr14:8576897 4.20E-13 dispersed
Bpe13g00883 Bpe-Chr13:14946583 Bpe14g01151 Bpe-Chr14:8576897 6.14E-07 dispersed
Bpe13g00646 Bpe-Chr13:13310984 Bpe14g01151 Bpe-Chr14:8576897 7.56E-48 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g369 . . . . . Bpe14g01151 . . . Cmo17g00295 . . . . . . . . . . . . . . Cla06g00507 Cam06g0547 Cec06g0547 Cco06g0555 Clacu06g0533 Cmu06g0532 Cre06g1301 Cone14ag0788 Cone15ag0789 Cone7ag0182 Cone4ag0177 . . Chy11g01467 . Blo02g00577 Blo07g00190 Bda11g00543 . . Bpe13g00646 . Bma06g01520 . . . Cma08g01200 Cma17g00305 Car08g01078 Car17g00281 Cpe12g00257 Cpe17g00097 Bhi12g01745 . . . . . . . . . . . . . Lsi09g01393 . . Cme11g01973
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002416 3 2 4 1 2 2 3 2 2 1 2 2 3 2 2 3 2 2 3 2 2 1 1 2 2 2 1 1 1 3 61
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe14g01151 Bpe_Chr14 FPKM 1.036145 1.291493 10.921738 10.804198 18.225573 25.76972 19.092775 58.231579 74.238838 65.697273