Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe14g01175 ATGGAGTTTCAGAAGCGCCAAAATCCGAGCCTTCCGGAGAGGAAGGGGCAGAAGAGAAAGCTCGAGGAGGAAATTGAAGACGACCGGGAGATCTCTGTACCATCTGGTGACGCCAGGCAAGCTTTACTGTGTGAGGTGAGTAGTCAGGTCGATGTTCTCAACTCCGTCTTTTCTTGGAACGAACCCGATCGAGTTTCTGCTAAGCGTGCCACTCATGTCCTCGCCGAGCTTGCCAAAAATGAGGAGGTGGTGAACGTTATTGTAGAAGGTGGCGCTGTTCCGGCTTTGGTTAAGCATCTGCAAGCGCCGCCGTTCTTTGATGGCGATCTCAGTTCAAAGCCACTGGAGCACGAGGTTGAAAAGGGGAGCGCGTTTGCACTCGGGCTTCTCGCTGTAAAGCCTGAACATCAGCAATTGATAGTTAAAACTGGTGCATTGCCACATCTTGTTAATCTATTAAAGAGGCACAAGGACGGTTCTAATTCTCGAGCTGTTAATAGTGTCATTCGTAGAGCCGCGGATGCCATTACTAACCTTGCTCATGAGAATAGCTCCATTAAATCTCGTGTCAGGATGGAAGGTGGAATTCCTCCACTTGTTGAGTTGCTTCAATTTACTGATACAAAGGTGCAAAGAGCTGCAGCTGGGGCATTGAGAACCTTGGCGTTTAAGAATGACGAAAATAAGAATCAGATTGTTGAATGCAATGCTCTTCCTACTCTAATTCTGATGCTTTGGTCTGAGGATGCCGCCATACATTATGAAGCGGTTGGCGTTATTGGAAATCTGGTTCATTCATCACCAAATATTAAGAAAGAAGTCATTGTTGCTGGAGCTCTACAGCCAGTTATTGGACTACTTAGTTCATGCTGCTCTGAGAGCCAAAGGGAAGCAGCCTTGTTACTCGGGCAATTCGCTGCAACTGATTCAGATAGCAAGATTCACATTGTTCAGAGGGGTGCTGTAGGACCTTTGATTGAAATGCTTCAATCACCTGATGTACAGCTGAGAGAAATGTCAGCTTTTGCACTAGGGAGGTTGGCACAGGACGCACACAATCAAGCGGGCATTGCTCATAATGGAGGTTTGGTGCCACTATTGAAGCTTCTTGATTCTAAAAATGGATCTCTGCAACATAATGCAGCATTTGCTCTTTATGGCCTTGCAGACAACGAGGATAACGTTTCCGATTTTATTAGGGTGGGAGGTGTCCAGAAGCTTCAGGATGGTGAATTTATCGTTCAAGCTACGAAAGATTGTGTAGCCAAGACATTGAAAAGGTTGGAGGAAAAGACACATGGTCGGGTTTTAAATCATCTATTATATCTGATGCGTATAGCAGAGAAGGCTGTCCAAAGACGAGTTGCTTTGGCTCTTGCCCATCTTTGTTCACCAGATGATCAGAGAACTATATTCATTGATAATAATGGCATGTTATTTTCTCCTGCATCTTTTCATAGGATGGAGTTACTTCTGGGGCTTCTTGGTTCTGCAAGTCTTAAGCAGCAACTTGATGGTGCTGTGGCTCTTTACAAGCTTGCAAACAAAGCGATGACTCTTTCTCCCGTGGATGCTGCTCCTCCATCTCCAACACCACAGGTTTACTTGGGGGAACAGTACGTAAATAACCCTACACTGTCTGATGTTACATTTCTTGTCGAAGGCAAACGATTCTATGCCCACAGAATTTGTCTGCTAGCTTCTTCAGATGCATTTCGTGCAATGTTTGATGGTGGCTACCGGGAAAAGGATGCAAGGGACATAGAAATTCCAAATATTAGGTGGGAGGTTTTCGAATTGATGATGAGTTTTGTGATCGTACTCTTCTACAGATTCATATATACTGGATCTGTGGACGTCTCGATAGATATTGCACAAGATCCCCTTAGAGCGGCTGATCAGTATCTCTTGGAGGGATTGAAAAGACTTTGTGAGTATACCATTGCACAGGATATATCATTGGAAAATGTTGCAAGCATGTATGAACTTTCAGAAGCATTCCATGCTATATCTTTGAGACACACATGCATCCTCTATATTTTGGAACAGTTTGAGAAACTGAGTGCTAAGCCAGGGCAGGCACATTTGATCCAGCGCATACTACCAGAGATTCGCTGCTATTTTGCCAAAGCACTTACCAAACGTAGCCTTCATAACTGTCGGTTGTAG 2169 44.67 MEFQKRQNPSLPERKGQKRKLEEEIEDDREISVPSGDARQALLCEVSSQVDVLNSVFSWNEPDRVSAKRATHVLAELAKNEEVVNVIVEGGAVPALVKHLQAPPFFDGDLSSKPLEHEVEKGSAFALGLLAVKPEHQQLIVKTGALPHLVNLLKRHKDGSNSRAVNSVIRRAADAITNLAHENSSIKSRVRMEGGIPPLVELLQFTDTKVQRAAAGALRTLAFKNDENKNQIVECNALPTLILMLWSEDAAIHYEAVGVIGNLVHSSPNIKKEVIVAGALQPVIGLLSSCCSESQREAALLLGQFAATDSDSKIHIVQRGAVGPLIEMLQSPDVQLREMSAFALGRLAQDAHNQAGIAHNGGLVPLLKLLDSKNGSLQHNAAFALYGLADNEDNVSDFIRVGGVQKLQDGEFIVQATKDCVAKTLKRLEEKTHGRVLNHLLYLMRIAEKAVQRRVALALAHLCSPDDQRTIFIDNNGMLFSPASFHRMELLLGLLGSASLKQQLDGAVALYKLANKAMTLSPVDAAPPSPTPQVYLGEQYVNNPTLSDVTFLVEGKRFYAHRICLLASSDAFRAMFDGGYREKDARDIEIPNIRWEVFELMMSFVIVLFYRFIYTGSVDVSIDIAQDPLRAADQYLLEGLKRLCEYTIAQDISLENVASMYELSEAFHAISLRHTCILYILEQFEKLSAKPGQAHLIQRILPEIRCYFAKALTKRSLHNCRL 722
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 8792724 8798090 - Bpe014549.1 Bpe14g01175 115484

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe14g01175 722 Gene3D - 271 522 IPR011989 -
Bpe14g01175 722 Gene3D Potassium Channel Kv1.1; Chain A 528 681 IPR011333 -
Bpe14g01175 722 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 91 145 IPR000225 GO:0005515
Bpe14g01175 722 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 320 362 IPR000225 GO:0005515
Bpe14g01175 722 SUPERFAMILY ARM repeat 50 408 IPR016024 -
Bpe14g01175 722 Pfam Armadillo/beta-catenin-like repeat 187 222 IPR000225 GO:0005515
Bpe14g01175 722 Pfam Armadillo/beta-catenin-like repeat 225 264 IPR000225 GO:0005515
Bpe14g01175 722 Pfam BTB/POZ domain 540 650 IPR000210 GO:0005515
Bpe14g01175 722 Gene3D - 33 159 IPR011989 -
Bpe14g01175 722 PANTHER ARM REPEAT PROTEIN INTERACTING WITH ABF2-LIKE 1 717 - -
Bpe14g01175 722 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 194 229 IPR000225 GO:0005515
Bpe14g01175 722 CDD BTB_POZ_ARIA_plant 534 657 - -
Bpe14g01175 722 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 144 194 IPR000225 GO:0005515
Bpe14g01175 722 SUPERFAMILY POZ domain 538 649 IPR011333 -
Bpe14g01175 722 SMART arm_5 350 390 IPR000225 GO:0005515
Bpe14g01175 722 SMART arm_5 183 223 IPR000225 GO:0005515
Bpe14g01175 722 SMART arm_5 133 181 IPR000225 GO:0005515
Bpe14g01175 722 SMART arm_5 80 132 IPR000225 GO:0005515
Bpe14g01175 722 SMART arm_5 225 265 IPR000225 GO:0005515
Bpe14g01175 722 SMART arm_5 309 349 IPR000225 GO:0005515
Bpe14g01175 722 SMART arm_5 267 307 IPR000225 GO:0005515
Bpe14g01175 722 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 361 403 IPR000225 GO:0005515
Bpe14g01175 722 ProSiteProfiles BTB domain profile. 547 622 IPR000210 GO:0005515
Bpe14g01175 722 MobiDBLite consensus disorder prediction 1 32 - -
Bpe14g01175 722 PANTHER ARM REPEAT PROTEIN INTERACTING WITH ABF2 1 717 IPR044282 -
Bpe14g01175 722 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 236 278 IPR000225 GO:0005515
Bpe14g01175 722 SMART BTB_4 547 652 IPR000210 GO:0005515
Bpe14g01175 722 Gene3D - 160 270 IPR011989 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe14g01175 - - - zju:107423043 1210.67
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe05g01070 Bpe-Chr5:23198463 Bpe14g01175 Bpe-Chr14:8792724 1.71E-07 dispersed
Bpe13g00685 Bpe-Chr13:13516530 Bpe14g01175 Bpe-Chr14:8792724 3.27E-07 dispersed
Bpe14g01107 Bpe-Chr14:8276138 Bpe14g01175 Bpe-Chr14:8792724 1.76E-07 dispersed
Bpe14g01175 Bpe-Chr14:8792724 Bpe15g00315 Bpe-Chr15:14650719 7.24E-06 dispersed
Bpe14g01175 Bpe-Chr14:8792724 Bpe06g00481 Bpe-Chr6:16075237 4.70E-12 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g464 . . . . . Bpe14g01175 . . . . Cma06g01423 Cma14g01691 Car06g01226 Car14g01525 Sed02g1251 Cpe08g00251 Cpe03g01425 Bhi01g00836 Tan10g0863 Cmetu06g0635 . . . Lcy11g1523 . . . . . . . . . Cone7ag0235 Cone4ag0225 Lsi05g01437 . . Cme06g00626 Blo02g00552 . . . . . . . . Cmo06g01425 Cmo14g01736 . . . . . . . . . . . . . Cla05g00562 Cam05g0618 Cec05g0628 Cco05g0623 Clacu05g0614 Cmu05g0582 Cre05g0650 . Csa03g01351 Chy06g00596 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0008033 0 1 1 0 1 1 2 1 1 1 1 1 2 1 1 2 1 3 2 1 1 1 1 1 1 1 1 2 1 2 36
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22515 PF00651 BTB 2.20E-20 CL0033 Bpe TR
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe14g01175 Bpe_Chr14 FPKM 7.446735 10.16428 2225.786377 2160.020264 126.536743 135.353516 134.30365 1095.939087 1153.469238 1090.144165