Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe14g01183 ATGGGCAAGATGAAAGAGCAGGAGGGCAGTGCCAGAGTCGAAGCTGTTCTAGAGATTCTCAGAAAACATGCTCCACTAACAGTAAAACAAGAGAAGTTCTGTAGTATTGGCTGTGTAAAGAGGTTTCTCAAGTGGAAAGGGAATAACGTGAAGAAGGCGGCGAAATGTTTAAGGGCTTGTATATCTTGGAGAGAGAGCATCGGAATCGATCAGTTGATAGCAGACGAGTTCTCGGTCGAGCTCGCGGAAGGCGTGGCTTACGTTGCTGGTCAAGATGAAGAATCAAGACCTATCCTTGTTTTCCGAATCAAGCAGGATTATCAGAAGTTCCATTCCCCCAAAAACTTCACTCGGCTGCTGGTTTTTACGCTGGAAGTAGCCATAGGAACAATGCCGAAAAACGGGGAGCAATTAGTAATCCTTTTCGATGCAAGCTTTTTCAGATCGGCGTCGGCGTTTGTGAACTTGGTGGTGGCGACGCTGAAGATTATGGCGGAGTATTATCCAGGCCAGCTTTTCAAGTGCTTCGTCATTGATCCACCATCTCTCTTTTCCTATCTATGGAAGGGTGTCCGGCCGTTCGTTGAGCTATCGACGGCGACGATGGTAGTATCTTCCCTAGATTTTGAAGAATCCTTCGAATTCAACGATTTGTTAGCCTCCCCACGCGCCTCCTCTCTCCGATTTGATCCAAATTCAACGGCAAAGATCGGGTTTTCCGCCTCCTCTCGCTTCGCTTTCACCGTCTCACACCAATTTGACTCTCTCAAGCCTTGGTACCTGAGCGTAACCGACACGTCGGCCTCTAAAGTAGGCCCCACCAGTCCCCTACTGGGTCCCGCACTCGTCTCTCCGCTCAACGCCCGGTCTTTCTCCTTCGCGTCACCTGTTTCTCGAGCGCCACGTGGGAGCATCAACGGTGGAAATTTGAGGAAAAGCTTTCGCCCGTCGACTCCGTTGCCCGAGAGGTCGACCGCCCCACCGAGGACCCCGCGGCCGTCGTTCCTCCAGTCACCGGCGGTGTTCTTCAGGAGGGAGGGACAAGGCAGCAGAACGGAAAAGTGTAGGGATGCATTTTCGCCGTTTTTGAAATTCTACCGAAGACCGTACGACGAAATGATTTACAGGTCGAAGATGAGGCCGCCGCTTGGAGGGCTCGTCTCCATCGTCTCTCCCCACCTTAAACGCCGCCACGTCTCTGTATCTCAACGGTTCTAA 1218 51.64 MGKMKEQEGSARVEAVLEILRKHAPLTVKQEKFCSIGCVKRFLKWKGNNVKKAAKCLRACISWRESIGIDQLIADEFSVELAEGVAYVAGQDEESRPILVFRIKQDYQKFHSPKNFTRLLVFTLEVAIGTMPKNGEQLVILFDASFFRSASAFVNLVVATLKIMAEYYPGQLFKCFVIDPPSLFSYLWKGVRPFVELSTATMVVSSLDFEESFEFNDLLASPRASSLRFDPNSTAKIGFSASSRFAFTVSHQFDSLKPWYLSVTDTSASKVGPTSPLLGPALVSPLNARSFSFASPVSRAPRGSINGGNLRKSFRPSTPLPERSTAPPRTPRPSFLQSPAVFFRREGQGSRTEKCRDAFSPFLKFYRRPYDEMIYRSKMRPPLGGLVSIVSPHLKRRHVSVSQRF 405
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 8849639 8851708 - Bpe014556.1 Bpe14g01183 115492

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe14g01183 405 SMART sec14_4 80 228 IPR001251 -
Bpe14g01183 405 MobiDBLite consensus disorder prediction 302 338 - -
Bpe14g01183 405 Gene3D - 3 221 IPR036865 -
Bpe14g01183 405 SUPERFAMILY CRAL/TRIO N-terminal domain 8 76 IPR036273 -
Bpe14g01183 405 CDD SEC14 79 213 IPR001251 -
Bpe14g01183 405 SUPERFAMILY CRAL/TRIO domain 75 196 IPR036865 -
Bpe14g01183 405 PANTHER SEC14P-LIKE PHOSPHATIDYLINOSITOL TRANSFER FAMILY PROTEIN 4 405 - -
Bpe14g01183 405 PANTHER SEC14P-LIKE PHOSPHATIDYLINOSITOL TRANSFER FAMILY PROTEIN 4 405 - -
Bpe14g01183 405 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 76 231 IPR001251 -
Bpe14g01183 405 Pfam CRAL/TRIO domain 83 200 IPR001251 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe14g01183 - - - qsu:112038137 615.92
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bpe13g00610 Bpe14g01183 CCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe06g00046 Bpe-Chr6:533960 Bpe14g01183 Bpe-Chr14:8849639 8.49E-18 dispersed
Bpe13g00448 Bpe-Chr13:12006463 Bpe14g01183 Bpe-Chr14:8849639 1.03E-15 dispersed
Bpe14g01183 Bpe-Chr14:8849639 Bpe15g00643 Bpe-Chr15:17216700 4.32E-15 dispersed
Bpe13g00610 Bpe-Chr13:13125871 Bpe14g01183 Bpe-Chr14:8849639 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g489 . . . . . Bpe14g01183 . . . . Cma06g01415 . Car06g01220 . Sed02g1245 Cpe08g00256 . Bhi01g00819 Tan10g0850 Cmetu06g1818 . Hepe05g1545 . Lcy11g1540 . . . . . . . Cone14ag0845 . Cone7ag0246 Cone4ag0240 Lsi05g01598 . . Cme06g00614 Blo02g00543 Blo07g00215 Bda11g00573 . . Bpe13g00610 Bma02g00854 Bma06g01552 . Cmo06g01417 . . . . . . . . . . . . . . Cla05g00550 Cam05g0598 Cec05g0609 Cco05g0606 Clacu05g0596 Cmu05g0566 Cre05g0634 . Csa03g01337 Chy06g00584 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004551 1 1 2 3 2 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 3 1 1 41
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe14g01183 Bpe_Chr14 FPKM 34.862534 37.268845 29.52916 30.658957 16.511322 16.743662 17.151768 36.097485 34.693638 39.268745