Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe14g01206 ATGGCGACCTTGTCACATTCTGGATCAGGGAGATTGTATTCGTGGTGGTGGGACAGTCACAATAGCCCTAAAAATTCCAAATGGCTCCAAGAAAATCTCAAAGACATGGATGCGAAAGTAAAAGCCATGATCAAGCTTATTGAAGAAGATGCAGATTCTTTTGCAAGAAGGGCTGAAATGTACTACAAGAAAAGGCCAGAGCTCATGAAATTGGTCGAGGAAATTTATAGAGCTTACCGCGCATTAGCAGAGAGATACGATCACGCGACTGTGGAGCTTCGTCAAGCTCATCGGACGATGGCGGAAGCCTTTCCAAACCAAGTCCCTTATGATCTGATTGATGATTCGCCCTCTGAAACTTCTGCTTCTGGAGAACCCCATTCTCCTGAAATACCGCATCCAATTCGCTCATTATGCGAACTCAATGACTCGTCGACTAGCACAGATGGATCGGGCTATGGACTTAGCAAAAGGGGTCTAAGAAAACTTGATGAAGATGCATTTTCTCAGTTATCGAGTCAGAACCAGAATCTCAAGCTTCGTGCTGAAACATCAGAAACAGAAATTCAAAATATCAAAGAAATGTTGACAAAAATAGAAGCTGAGAAAGAAGCTATTTTCGCCAAATACCAGCAGGCCTTAGAAAAATTATCCGATTTGGAGAGGAAACTGGACATTGCTCAGAAAGAAGCTGCAGGGCTTGATCACTGCGCAAGCAAGGCTGAAATCGAGATGAAAATATTGAAGGAAGCTCTTTCTGGAATTGAAGAAGAAAGGGATGCAAGTTTTCTTCAGTATAATCAGTCGTTGGAGAGGATATCTACCCTTGAGAATTTACTCTCTCTTTCTCAGGAAGAGGCTAAAGCACTTGATATGAGAGCTGGTAAAGCAAAAAATGAAACTCAATATCTCAGATTACAGCTTTCGAGTTTAGAAAGCGAAAAGGAAGACAATCTTTGTCAGTATAAACTATGTCTGGAGAAGATATCTCATATGGAGGCTAAGATTTCTGCTGCTGAGGAAAATGCAGGAGTACTGAATGAACATATAGTAAGAGTAGAATCTGAAGTAAGTGCATTAAAGGAGACTATCAATGAGCTGAATAGAGTGAAAGAAACAGCATCTCTCCAGTACCAGGATTGCTTAGACACGATGGCTAAGATGGAAAGCGAAATTGCCCGTTTTCAATATGATGCGAAACAATTAAATGGCGAACTTCTAACAGTCGCGAAAAAGTTGGACAGTGCAGAAGTAAAATGTTCTCAATTGGAGGAATCAAATCTAGCTCTGCGATTAGAGGCAGACAGTCTGATAAGAAAGATCACGATGAAGGATCAAGAACTTGCTCAAAGGCACGATGAACTCAAGAAATTCCAGATTCAAATCCAAGATGAGCAGTCACGGTTTACGCAAGTTGAAACCACTCTTCACGCATTACAAAAATTGCATTCTCAATCTCAAGAGGAGCAAAGAGCTCTTTCATTGGAGCTTAAAAATGGTCTTCAGATGTTGAAGGAGTTGGGATCTCGCAAACTTAGTGTGGAGGAAGAACTTCAAAAGGTCAAGGAAGAAAATAGGAGCCTGAATGAATCAAATTTATCTTCGAATATTTCGGTGAAGAATCTGGAGAATGAAATTTTCAGCTTAAAGGTGATAAAAGACAAACTTGAAGAAGAGGTATTCCGAAAAGCAGAATATAGCAACGCCCTTGAGCAGGAAATTCACCGTTTAAGAGAGGAAATCAAGGGCATGAATGAAAGATACCAGGCCATAATGATGCAGGTTGAATCTGTAAAGGAATTGCAAAATGAGAATGCAAAGCTTAGAGACATCTGTGAGATCGAGCGTAACAAAGGAGAAGTTCTTTACGAGAAGTTGAATTCTATGGACAAAATGTCAAAAGATAATGCAGTTTTCGAGAAGTCTTTAGCAGAAATGAATGGTGAGTTGGAAAAGCTAAGGGAAAAGGCAAAGGACTTTCAGGAGACATGCCATTTTCTTCAGGGAGAAAAAACTACTCTTGTTGCTGAAAAGACCACCTTGCTGTTACAGCTGCAGATCATAACTGAAAATATGCAGGAGCTCTTAGAGAAGAACACCTTACTTGAAAATTCCTTATGCAATGCAAACACCGAGCTTGAAGATCTGAGGGGTCATTCAAAGAGCTTAGAAGAATTCTGCCAGTTGCTGAAGGGTGAAAAATCTACCATTCTCAGTGAAAGAGATGCCTTGGTATCTCAGTTGGAAAGCGTTGAACTGAGGCTGGGAAATCTTGAAAAGAGATTTTCAAATCTCGAAGAGAAGTGTACTTCCTTGGAAAACGAAAATGAGGCAACGCTCAATCAAGTGGAAGAATTAAGATCTTCCCTTGTTTCCCAAAAAGAAGAGCATGCAAGTTACAGGACACTAAACGAGACAAAAGTGTCTGGCTTGGAAACCAATATTCATATTTTGCAAGAAAACAGTAGAATGGGCAAGAGAGAATTTGAAGAAGAACTAGAGAAGGCTGTCAATGCTCAGGTAGAGATCTTCATCCTCCAAATGTTTGTGGAAGATTTGGAGGGGAAGAATTATTTGATGTTTATCGAATGTCAAAAGCTTAACGAGGCGACCAAATTGTCAAATAAACTGATCTCGGAGTTGGAGCGGGAAAATCTCGAGCAGCAGGTGGAAATAGAGTTCTTAGTGGATGAAATTGAAAACTTAAGAGGTGGGATTCATAGAGTGTTTAAGGCTCTTCAACTCAATCTTGAAAATGGGCACAAAGATAAGATCGAGAGGGAGAAACTTCCTCTGTTGAATATTTTGGACAAAGTTGAGGAATTAAAAACCTGTTTTCTCAGAAACAAGGAGGAGATGCAGCAGCTGCTGGTTGAGAACTCAGTGCTCTTAACTTTGCTTGGGCAACAGACATTAGAGGGCCAAGAACTTCAGGCGGAGAAAAATTTTCTCGAAAATGAGTTTAAAATCTTGAAAGAAGAGTTCGCTATGAATGAAAAAGACAAACACCATCTGTTAGAGAAGACAAAGCAATTGATGCTTCAAATTACCGAGAAAGAGCAGCATGAGAAATTCTTGGCGGGTGGAATCCAAATCCAAAATCTCGAGTTGGAAAATTTGAAACTTGATTACCTTGCGTTACAGGAAGAAAATTCAGAAATGCTTAAAGAAAAGGGGTTTGAGCTACAGAAATTTTTGCAACTTAAAGAGGTAAATCATATTCTTGAAGAGGAACATAGAATAATCAGTGAAGAAGCTGTAGCACTGAGCATATTCTCTTTAGTCTGTGAAAGCTTGACTGCAGATAAAGCTGTCGAAATGAAAGCACTTAATGAAGATCTCAATCGTCACCATGTGGCCAATAGCGTGCTGGAGGAAGAGATAGAGGAGATGGCAGATATATTGGTAGCGAAGGAAACGGAAATTCTCCAATTGAACAAGTCCGTTAAGAATTTGATGGAGGAGCTGCATGAAGTCAAAAACTCAAATGATTGTCTAACCCATGAAATCGTTACTGGAAATAATTTTGTGAGACGGAAAGTAGAAGAACTGTCACAAACAGAACAAGAGCTCAAGGATGTGCAGGAATTAAACATGAAACTGTACAATGAAGTTGAGGAACTGAAGATGGAATGTAAAGGATCGACTTTGCTTCGAGAAAATCTAGAAATTGAGAATCTTGAACTTTGCATGAATGCCCACAGTTCGAATGATGAAATCACTTGGCTTAATGAAATGAATGAAAATTTGAAATCTGAGATTGCTGTTTTGAGTAAGGAAGTCGAAAAATGCAAGATTAGAGAGGACAACCTCAGTTCAGAGCTTCAGGAGAGAAGAGACGGGTTCGAACTATGGGATGCTGAAGCCGCTTTGTTCTATTTTGATCTTCAGATTTCGTCCGTTCGTGAGGTCTTCCTCGAAAATAAGCTGCACGAACTTACTCAAGTTTGTGAGAAGCTTGGAGGTGAGAGTGCAGCAAAGGACGTGGAGATTCAAAGTCTACGAAAAAGCATTATGTTCATGGAAAGTGAAATGGGAGGACTGAAGGCCAAGTTTTCCACATACTTGCCTGATACAACTTCTTCGAAAGAGAATGTAGAAGTACTCGAGCATTATGTTCTTCCTCAAACTAAGCAGTTCTCTGGTGGAATTCAAGAAGAAATGGATGGTGAAAACACAGCTCTGTGCAACAAGATGGGACCTAGGACTAGAGAATTTGAAGAGCTAGAGGAAAAATCAAAAGAAACTATGACCAACCAAGGAACTTTTAACACCCACGTTGAAGCAAGAGGTCCAATGAAACAGATGAAAGAGTTCATATCTGAGGAGGCCTCAGATCATGAAGTCACAAAGAGTGAACGGATGGAACTTCGGAATGGGTTCGATCAGATTCCGAAACCACGCGCGAAAAGATCAGAAAATGGGACATTGATGAAAGACATCCCTCTTGATCAAGTCTCAGATTTTTCATTCCACAGAAAAAGCAAAAGGGAGAACCGTGATTCGAACGAACAAATGCTTCAATTATGGGAAACTGTGGAGAAGAACATCGGCCAGCATCAGACAGCCAATGAGATGCAGAAGCTGGCCATCATACCCCTCGAAACCGATCAGAACATATTCGAGGAAAAAAAATATTCAGACTCTTCGTCAGAATTACAAATAGAGAAAGAATTGGGTGTTGACATGCTAGAGAGATCCTCAAGCATCAGAGAACGAAGTCAAGGAGGTAAAAAGAAAAAAATTCTACAGAGGCTTGCTTCAGATGCTCAGAAATTGACAAATATTCAATCTACAGTTCATGATTTGAAGAAAAGACTGGAGAAAAAAAATTGGAGCAAGAAGGAAAGCAGCATTGAATATGAGAAGGTTTGTAAACGGGTAAAAGAAGTTGAAGAGACTATCACTCAGTTGGTCACTGTGAATGATCAAATGACAAAGAATGTAGAACACAGCCCGACGTCTCTGGCCGGGAAAACTGCATCGGAGTTGGAGAGCGAAAATGTCACTAGAAATAACGTGATGGAAAGGGCACGAAAAGGGTCTGAAAAGATTGGAAGATTGCATGTTGAGGTGCAGAATATTCAGCTTATCTTGATAAAATTGGAAGAAGAGAAGAAAAGAAAGTGGAAGACAAGATTTTCCAAGAACAAAACAGGCATCATACTGAGGGACTTCATTTACAGTAGCAGGAAAAACAGAGAGAAGAAGCAGCAGAAGAACTGTTTCTGTGGGTGCAACAGAGGATCAACTGATGAAGACTGA 5265 40.19 MATLSHSGSGRLYSWWWDSHNSPKNSKWLQENLKDMDAKVKAMIKLIEEDADSFARRAEMYYKKRPELMKLVEEIYRAYRALAERYDHATVELRQAHRTMAEAFPNQVPYDLIDDSPSETSASGEPHSPEIPHPIRSLCELNDSSTSTDGSGYGLSKRGLRKLDEDAFSQLSSQNQNLKLRAETSETEIQNIKEMLTKIEAEKEAIFAKYQQALEKLSDLERKLDIAQKEAAGLDHCASKAEIEMKILKEALSGIEEERDASFLQYNQSLERISTLENLLSLSQEEAKALDMRAGKAKNETQYLRLQLSSLESEKEDNLCQYKLCLEKISHMEAKISAAEENAGVLNEHIVRVESEVSALKETINELNRVKETASLQYQDCLDTMAKMESEIARFQYDAKQLNGELLTVAKKLDSAEVKCSQLEESNLALRLEADSLIRKITMKDQELAQRHDELKKFQIQIQDEQSRFTQVETTLHALQKLHSQSQEEQRALSLELKNGLQMLKELGSRKLSVEEELQKVKEENRSLNESNLSSNISVKNLENEIFSLKVIKDKLEEEVFRKAEYSNALEQEIHRLREEIKGMNERYQAIMMQVESVKELQNENAKLRDICEIERNKGEVLYEKLNSMDKMSKDNAVFEKSLAEMNGELEKLREKAKDFQETCHFLQGEKTTLVAEKTTLLLQLQIITENMQELLEKNTLLENSLCNANTELEDLRGHSKSLEEFCQLLKGEKSTILSERDALVSQLESVELRLGNLEKRFSNLEEKCTSLENENEATLNQVEELRSSLVSQKEEHASYRTLNETKVSGLETNIHILQENSRMGKREFEEELEKAVNAQVEIFILQMFVEDLEGKNYLMFIECQKLNEATKLSNKLISELERENLEQQVEIEFLVDEIENLRGGIHRVFKALQLNLENGHKDKIEREKLPLLNILDKVEELKTCFLRNKEEMQQLLVENSVLLTLLGQQTLEGQELQAEKNFLENEFKILKEEFAMNEKDKHHLLEKTKQLMLQITEKEQHEKFLAGGIQIQNLELENLKLDYLALQEENSEMLKEKGFELQKFLQLKEVNHILEEEHRIISEEAVALSIFSLVCESLTADKAVEMKALNEDLNRHHVANSVLEEEIEEMADILVAKETEILQLNKSVKNLMEELHEVKNSNDCLTHEIVTGNNFVRRKVEELSQTEQELKDVQELNMKLYNEVEELKMECKGSTLLRENLEIENLELCMNAHSSNDEITWLNEMNENLKSEIAVLSKEVEKCKIREDNLSSELQERRDGFELWDAEAALFYFDLQISSVREVFLENKLHELTQVCEKLGGESAAKDVEIQSLRKSIMFMESEMGGLKAKFSTYLPDTTSSKENVEVLEHYVLPQTKQFSGGIQEEMDGENTALCNKMGPRTREFEELEEKSKETMTNQGTFNTHVEARGPMKQMKEFISEEASDHEVTKSERMELRNGFDQIPKPRAKRSENGTLMKDIPLDQVSDFSFHRKSKRENRDSNEQMLQLWETVEKNIGQHQTANEMQKLAIIPLETDQNIFEEKKYSDSSSELQIEKELGVDMLERSSSIRERSQGGKKKKILQRLASDAQKLTNIQSTVHDLKKRLEKKNWSKKESSIEYEKVCKRVKEVEETITQLVTVNDQMTKNVEHSPTSLAGKTASELESENVTRNNVMERARKGSEKIGRLHVEVQNIQLILIKLEEEKKRKWKTRFSKNKTGIILRDFIYSSRKNREKKQQKNCFCGCNRGSTDED 1754
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 9002852 9008292 + Bpe014572.3 Bpe14g01206 115515

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe14g01206 1754 Coils Coil 350 377 - -
Bpe14g01206 1754 PANTHER PROTEIN NETWORKED 4A 1 148 - -
Bpe14g01206 1754 Gene3D - 622 812 - -
Bpe14g01206 1754 Coils Coil 504 531 - -
Bpe14g01206 1754 Coils Coil 322 342 - -
Bpe14g01206 1754 Coils Coil 385 405 - -
Bpe14g01206 1754 MobiDBLite consensus disorder prediction 1458 1477 - -
Bpe14g01206 1754 Coils Coil 168 230 - -
Bpe14g01206 1754 Coils Coil 1107 1169 - -
Bpe14g01206 1754 Coils Coil 238 258 - -
Bpe14g01206 1754 Coils Coil 864 898 - -
Bpe14g01206 1754 PANTHER PROTEIN NETWORKED 4A 165 1754 - -
Bpe14g01206 1754 Coils Coil 1030 1057 - -
Bpe14g01206 1754 SUPERFAMILY Tropomyosin 170 414 - -
Bpe14g01206 1754 Coils Coil 685 705 - -
Bpe14g01206 1754 Coils Coil 567 594 - -
Bpe14g01206 1754 MobiDBLite consensus disorder prediction 1458 1481 - -
Bpe14g01206 1754 Coils Coil 1240 1267 - -
Bpe14g01206 1754 Coils Coil 741 796 - -
Bpe14g01206 1754 SUPERFAMILY Myosin rod fragments 640 715 - -
Bpe14g01206 1754 Coils Coil 413 440 - -
Bpe14g01206 1754 Pfam KIP1-like protein 14 87 IPR011684 GO:0003779
Bpe14g01206 1754 Coils Coil 598 618 - -
Bpe14g01206 1754 MobiDBLite consensus disorder prediction 139 153 - -
Bpe14g01206 1754 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 13 93 IPR011684 GO:0003779
Bpe14g01206 1754 Coils Coil 636 670 - -
Bpe14g01206 1754 MobiDBLite consensus disorder prediction 107 156 - -
Bpe14g01206 1754 Coils Coil 1174 1225 - -
Bpe14g01206 1754 Coils Coil 539 559 - -
Bpe14g01206 1754 Coils Coil 967 1001 - -
Bpe14g01206 1754 PANTHER PROTEIN NETWORKED 1D ISOFORM X1 165 1754 - -
Bpe14g01206 1754 PANTHER PROTEIN NETWORKED 1D ISOFORM X1 1 148 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe14g01206 - - - qsu:111998448 1696.4
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bpe13g00592 Bpe14g01206 CCT
Bpe13g00592 Bpe14g01206 ECH
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe11g00222 Bpe-Chr11:1481603 Bpe14g01206 Bpe-Chr14:9002852 4.62E-49 dispersed
Bpe12g00624 Bpe-Chr12:11904261 Bpe14g01206 Bpe-Chr14:9002852 1.10E-07 dispersed
Bpe14g01206 Bpe-Chr14:9002852 Bpe08g01417 Bpe-Chr8:14978926 2.69E-33 dispersed
Bpe02g00141 Bpe-Chr2:973680 Bpe14g01206 Bpe-Chr14:9002852 3.40E-40 transposed
Bpe03g00443 Bpe-Chr3:23418205 Bpe14g01206 Bpe-Chr14:9002852 3.57E-27 transposed
Bpe06g00105 Bpe-Chr6:1565054 Bpe14g01206 Bpe-Chr14:9002852 3.39E-36 transposed
Bpe15g00262 Bpe-Chr15:13969558 Bpe14g01206 Bpe-Chr14:9002852 1.27E-40 transposed
Bpe13g00592 Bpe-Chr13:13028297 Bpe14g01206 Bpe-Chr14:9002852 0 wgd
Bpe14g01206 Bpe-Chr14:9002852 Bpe06g00454 Bpe-Chr6:15919114 6.52E-38 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g541 . . . . . Bpe14g01206 . . . . Cma06g01386 Cma14g01737 Car06g01195 Car14g01566 Sed02g1335 Cpe08g00276 Cpe03g01456 Bhi01g00773 Tan10g0800 Cmetu06g0678 . . . . . . . . . . . . . . . Lsi05g01629 . . Cme06g00583 Blo02g00526 Blo07g00230 Bda11g00592 Bda13g00105 . Bpe13g00592 Bma02g00829 . . Cmo06g01392 Cmo14g01776 . . . . . . . . . . . . . Cla05g00517 Cam05g0568 Cec05g0580 Cco05g0578 Clacu05g0565 Cmu05g0536 Cre05g0605 . Csa03g01300 Chy06g00554 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003822 2 2 2 1 2 1 2 1 1 1 1 1 4 1 1 2 1 2 2 1 1 1 1 1 1 1 1 3 1 2 44
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe14g01206 Bpe_Chr14 FPKM 0.360587 0.0 9.470995 10.354754 6.766402 9.982916 7.21937 113.025589 120.158142 99.789871