Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe14g01207 ATGGGAAAGGCAGGAAAATGGTTCAGAAGCATTTTCATGGGCAAGAAAGACGATGAAAAGCGTCCAAGCCATGTGAGCTGTTATTCGGTTGCGTCCGAGAGCCCGGGAACTCCATTATCGGCAGCTCAGAAAGAGAAGAGAAGATGGAGTTTTCGAAGATCATCAGCTAAAGCAGCCCTTCCCAAGGATGAGATCACATTTGAAACTGAAAATGAGCAGAAAAGGAATGCCTTGACAGTGGCGGCGACTGCAGCTGTGATTTGTCTGACTTCTTCTACCAATGACAAAGACACCTTAGTTCAAGAGACTGCTGCTATAAGAATCCAGTCATATTTCCGTTCTTATTTGGCGAAGAAAGCGTTATGCGCATTGAGAGGATTGGTGAAGTTGCAGGCATTGGTGAGGGGTCACTTGGTGAGAAAACAAGCATTTTCTACTCTCCGATGCATGCAAGCCCTGATCACAGCTCAGGATCGAGCTCGGGCCCTGAGGATTCAGTTGGCCGAAGATCAGAAATCCTGCAATCAGAGGCCATCGGCGCACAGAAAATCTACTCAAGACAACCAATCCCAGCCAGGATATCATATTGCTTCTGAAGGACTTAAACACAGAGTGTTTGAGGTATCACTTGCCGATCTTCAAGATGATGAAGAGCATGCTTACAGAAAGATTCGTTTGAGAGCTGAAGATGTCCAAAGCAGAAATGTTTTGACAAATTTCTGGGGAATGAATTTTACTACTGACAAGTTGAGGTCTTTGGTTCGGAAGTGGCAAACATTGATAGAAGCTCATGTTGATGTAAAGACTACAGACAACTACACTTTGAGAATGTTTTGCATCGGGTTCACTAAAAGACGACCAAACCAGGTTAAGAGAACCTGTTATGCACAATCCAGTCAGATCAGACAGATTCGTCGGAAGATGATAGAGATAATGGTAAACCAGGCAACATCTTGTGATCTGAAGGAGTTGGTTCGCAAGTTTATTCCTGAATCAATTGGAAAAGAAATTGAGAAAGCAACGTCAAGCATTTACCCTTTACAAAATGTATTTATTCGAAAAGTCAAAATCTTGAAAGCTCCCAAGTTTGATCTTGGAAAGTTGATGGAGGTTCACGGTGATTATTCAGAAGATGTGGGTGTCAAGCTGGAGAGGCCTGCTGATGAAACAATGGCTGAGGGGACTACTGAAGTTGTCGGAGCTTGA 1206 43.7 MGKAGKWFRSIFMGKKDDEKRPSHVSCYSVASESPGTPLSAAQKEKRRWSFRRSSAKAALPKDEITFETENEQKRNALTVAATAAVICLTSSTNDKDTLVQETAAIRIQSYFRSYLAKKALCALRGLVKLQALVRGHLVRKQAFSTLRCMQALITAQDRARALRIQLAEDQKSCNQRPSAHRKSTQDNQSQPGYHIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQSRNVLTNFWGMNFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMIEIMVNQATSCDLKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKLERPADETMAEGTTEVVGA 401
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 9009013 9016605 - Bpe014573.1 Bpe14g01207 115516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe14g01207 401 ProSiteProfiles IQ motif profile. 125 152 IPR000048 GO:0005515
Bpe14g01207 401 Pfam Ribosomal S3Ae family 195 361 IPR001593 GO:0003735|GO:0005840|GO:0006412
Bpe14g01207 401 Gene3D - 100 155 - -
Bpe14g01207 401 SMART Ribosomal_S3Ae_2 180 361 IPR001593 GO:0003735|GO:0005840|GO:0006412
Bpe14g01207 401 MobiDBLite consensus disorder prediction 171 194 - -
Bpe14g01207 401 Pfam IQ calmodulin-binding motif 128 142 IPR000048 GO:0005515
Bpe14g01207 401 Pfam IQ calmodulin-binding motif 104 121 IPR000048 GO:0005515
Bpe14g01207 401 Hamap 40S ribosomal protein S1 [RPS3A]. 125 398 IPR027500 GO:0003735|GO:0005840|GO:0006412
Bpe14g01207 401 ProSitePatterns Ribosomal protein S3Ae signature. 201 213 IPR018281 GO:0003735|GO:0005840|GO:0006412
Bpe14g01207 401 ProSiteProfiles IQ motif profile. 101 129 IPR000048 GO:0005515
Bpe14g01207 401 PANTHER 40S RIBOSOMAL PROTEIN S3A 192 401 - -
Bpe14g01207 401 Coils Coil 401 401 - -
Bpe14g01207 401 PANTHER 40S RIBOSOMAL PROTEIN S3A 192 401 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe13g00591 Bpe14g01207 CCT
Bpe05g00890 Bpe14g01207 CCT
Bpe05g00890 Bpe14g01207 ECH
Bpe13g00591 Bpe14g01207 ECH
Bpe04g00817 Bpe14g01207 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g00818 Bpe-Chr4:5401467 Bpe14g01207 Bpe-Chr14:9009013 6.90E-138 dispersed
Bpe05g00893 Bpe-Chr5:22008909 Bpe14g01207 Bpe-Chr14:9009013 2.83E-88 dispersed
Bpe14g01207 Bpe-Chr14:9009013 Bpe14g00783 Bpe-Chr14:5953139 3.25E-20 dispersed
Bpe13g00591 Bpe-Chr13:13019910 Bpe14g01207 Bpe-Chr14:9009013 2.28E-57 wgd
Bpe14g01207 Bpe-Chr14:9009013 Bpe04g00817 Bpe-Chr4:5392011 1.32E-37 wgd
Bpe14g01207 Bpe-Chr14:9009013 Bpe05g00890 Bpe-Chr5:21999414 2.58E-22 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe14g01207 K02984 - csv:101203444 394.43