Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe14g01229 ATGGAGGAGCCTTTTTTTGATCTTGTCGAGTTTTTGAAGAAACCTACGATAACAGAAACATTTGTCGACATTTTGCTATGCGCAGTCCCGATTTGGCTTGCTGTGATGATAGGATTGGTGATCGGCTGGTCTTGGAAGCCTCGATGGACCGGCCTCCTTTTCCTTGGACTGCGAGGTAAATTCAGGATTCTCTGGACGGCTCCCCCGGGGTTTGGAGCTCGGCGGCTCTGGCTAGCATTCACGGCGCTCTCGGCGTTTTCTGTTTGCCGTACTATTTGGTTTAATTTCAAGAAGCGCAAAGATCTTCCTCCTACCTCTCTGGATTCAGCTGCAACAGTGGAATGTACATTGCAGGGTTCGGCTGAAGGATGCGAAGAAGTTTATGATTTAACACGATGCTTTCTCAGGGGGAAAGAAGTGAATGAGCTAAATGTTGTCTCAGAGAAAGATTTAGAACATCTGCTTCATCTTCTTGAAGGGAGAGAGGGAGAGATGGAATGGCAAAGCATGATGTCGAGATCAACCTCAAACTTTTTGTACCATGCTTGGCGGCATGAGCCTGAGACAGGCCCCACAATCTATCGTAGCCGGACTGTCTTTGAAGATGCGACGCCAGAGTTGGTTAGAGACTTCTTTTGGGATGATGAGTTTCGCCCTAAATGGGATCCAATGCTTGTGCACTTCAAGATATTGGAAGAATGCCCTCGAACAGGGTCCATGGTTGTTCACTGGATCAAAAAGTTTCCTTTCTTCTGCAGTGATAGAGAATATATCATTGGCCGAAGAATATGGGAGGCTGGGAAGAATTACTATTGTGTGACAAAGGGGGTGCCGTTTGCAGGTTTGCCTAAGCGTGACAAGCCTAGGCGTGTGGAACACTATTTCTCCAGTTGGATTGTCAGAGCTGTTGAATCCCTGAAAGGAGATGGACAGATGTCTGCTTGTGAGGTAATCCTATTTCACTACGAAGACATGGGAATTCCCAAAGACGTGGCTAAGTTGGGAGTCCGTCATGGAATGTGGGGTGCAGTTAAAAAGTTGCATGCCGGCATGAGAGCGTACCAAAATGCAAGAAAATCTGAGGCTTCTTTGTCTAGAAGTGCCCGAATGGCAAGAATCACTTCGAATTTCTCTCTGAATATAAGTGCAGATTCTTCAGAGCCAATGTCTGGAGAAGAGGAGCACGATGGAGCCATCAATGCTAGGGAACAAAAGAATGATGGCGGCATTTCTTGGAAATGGATTGTTATAGGTGGTTCAGTGGCTCTTGTTTGTGGACTTCACACAAATGCTATAGGGAGAGCCTTGTTACTCGGAGCCGGACAAAGAATGGCAAGAAGGTGA 1344 46.73 MEEPFFDLVEFLKKPTITETFVDILLCAVPIWLAVMIGLVIGWSWKPRWTGLLFLGLRGKFRILWTAPPGFGARRLWLAFTALSAFSVCRTIWFNFKKRKDLPPTSLDSAATVECTLQGSAEGCEEVYDLTRCFLRGKEVNELNVVSEKDLEHLLHLLEGREGEMEWQSMMSRSTSNFLYHAWRHEPETGPTIYRSRTVFEDATPELVRDFFWDDEFRPKWDPMLVHFKILEECPRTGSMVVHWIKKFPFFCSDREYIIGRRIWEAGKNYYCVTKGVPFAGLPKRDKPRRVEHYFSSWIVRAVESLKGDGQMSACEVILFHYEDMGIPKDVAKLGVRHGMWGAVKKLHAGMRAYQNARKSEASLSRSARMARITSNFSLNISADSSEPMSGEEEHDGAINAREQKNDGGISWKWIVIGGSVALVCGLHTNAIGRALLLGAGQRMARR 447
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 9210481 9217543 - Bpe014590.1 Bpe14g01229 115538

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe14g01229 447 SUPERFAMILY Bet v1-like 147 354 - -
Bpe14g01229 447 CDD START_STARD2_7-like 144 354 - -
Bpe14g01229 447 Gene3D - 143 357 IPR023393 -
Bpe14g01229 447 PANTHER PHOSPHATIDYLCHOLINE TRANSFER PROTEIN 1 447 - -
Bpe14g01229 447 Pfam START domain 163 305 IPR002913 GO:0008289
Bpe14g01229 447 PANTHER OS07G0185200 PROTEIN 1 447 - -
Bpe14g01229 447 ProSiteProfiles START domain profile. 167 356 IPR002913 GO:0008289
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe14g01229 - - - rcu:8280167 679.863
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g00909 Bpe-Chr8:11537853 Bpe14g01229 Bpe-Chr14:9210481 9.16E-109 dispersed
Bpe14g01229 Bpe-Chr14:9210481 Bpe09g00067 Bpe-Chr9:465762 3.89E-33 dispersed
Bpe14g01229 Bpe-Chr14:9210481 Bpe11g00376 Bpe-Chr11:2851684 1.36E-119 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g619 . . . . . Bpe14g01229 . . . . . Cma14g01782 Car06g01159 Car14g01603 . Cpe08g00311 Cpe03g01491 . . . . . . . . . . . . . . . . . . Lsi05g01676 . . Cme06g00539 Blo02g00607 . . . . . Bma02g00806 . . Cmo06g01352 Cmo14g01818 . . . . . . . . . . . . . Cla05g00482 Cam05g0525 Cec05g0538 Cco05g0538 Clacu05g0524 Cmu05g0496 Cre05g0563 . Csa03g01257 Chy06g00512 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0008740 0 0 1 1 1 1 2 1 1 1 1 1 1 1 1 1 1 2 2 1 1 1 2 1 1 1 1 2 1 1 33
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe14g01229 Bpe_Chr14 FPKM 31.488224 33.188538 23.488235 22.128904 22.362732 21.569929 21.342981 9.066671 10.057396 7.201625