Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe14g01247 AGCACCCTTTTAAACACTCCTTCTATGGATTCCGACTTCTCGCCGCAATCTTCGTTTGGGTCGCCAGATGTCTGTGCATGGGAATGGGATGGTTTTGGATATGGGAATGGTACTCTGCCTTTCGATGAAAATGATTCTGAAGAAATGCTTCTCTATGGACTTCTATCTGAGACCCGAGAAGAAGTGTCAGACAGAATTGAGGTGGAAGAGGTCGTTTCAGAATCCAAAGGAAAACCCATAAAGGATAAGGGCTTCAGAGGAGTGAGAAAGAGGCCGTGGGGGAAATTTGCGGCGGAGATAAGAGATTCAACGAGAAATGGCGTAAGAGTCTGGTTGGGAACGTTCGATAGCGCGGAAGCAGCAGCGTTGGCTTACGATCAAGCCGCTTTTGCAATGAGGGGATCGGCTGCGATCCTCAATTTTCCAGTGGAACGAGTGAGGGAATCACTGGAAGCGATGAACTGTAGAGGCTCCGACGGCGGCGGTTCTCCGGTGATGGCTCTGAAAAGAAAGCATTCAATGAGAAGGAAATACGGAGGGAAGAAAAACAACGAGAGAGAGGTGAAGATAGAAAATGTAGTGGTGTTTGAGGATTTAGGAGCAGATTATTTGGAAGAACTTTTGAGATCATCTGAGAATTAG 642 47.04 STLLNTPSMDSDFSPQSSFGSPDVCAWEWDGFGYGNGTLPFDENDSEEMLLYGLLSETREEVSDRIEVEEVVSESKGKPIKDKGFRGVRKRPWGKFAAEIRDSTRNGVRVWLGTFDSAEAAALAYDQAAFAMRGSAAILNFPVERVRESLEAMNCRGSDGGGSPVMALKRKHSMRRKYGGKKNNEREVKIENVVVFEDLGADYLEELLRSSEN 213
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 9403953 9404594 + Bpe014607.1 Bpe14g01247 115556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe14g01247 213 CDD AP2 83 143 IPR001471 GO:0003700|GO:0006355
Bpe14g01247 213 ProSiteProfiles AP2/ERF domain profile. 84 142 IPR001471 GO:0003700|GO:0006355
Bpe14g01247 213 SUPERFAMILY DNA-binding domain 84 144 IPR016177 GO:0003677
Bpe14g01247 213 Gene3D AP2/ERF domain 84 144 IPR036955 GO:0003700|GO:0006355
Bpe14g01247 213 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1B 34 210 - -
Bpe14g01247 213 SMART rav1_2 84 148 IPR001471 GO:0003700|GO:0006355
Bpe14g01247 213 Pfam AP2 domain 84 134 IPR001471 GO:0003700|GO:0006355
Bpe14g01247 213 PANTHER DNA-BINDING DOMAIN 34 210 IPR044808 GO:0003700|GO:0009873
Bpe14g01247 213 PRINTS Ethylene responsive element binding protein signature 108 124 IPR001471 GO:0003700|GO:0006355
Bpe14g01247 213 PRINTS Ethylene responsive element binding protein signature 85 96 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe05g00859 Bpe-Chr5:21803648 Bpe14g01247 Bpe-Chr14:9403953 4.27E-58 dispersed
Bpe09g00646 Bpe-Chr9:15102714 Bpe14g01247 Bpe-Chr14:9403953 2.08E-21 dispersed
Bpe10g00373 Bpe-Chr10:11289704 Bpe14g01247 Bpe-Chr14:9403953 5.65E-50 dispersed
Bpe14g01247 Bpe-Chr14:9403953 Bpe03g00368 Bpe-Chr3:9705570 2.42E-32 dispersed
Bpe11g01312 Bpe-Chr11:9821697 Bpe14g01247 Bpe-Chr14:9403953 3.68E-61 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22523 PF00847 AP2 2.70E-14 CL0081 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe14g01247 K14516 - jre:109007057 262.307