Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe14g01247 | AGCACCCTTTTAAACACTCCTTCTATGGATTCCGACTTCTCGCCGCAATCTTCGTTTGGGTCGCCAGATGTCTGTGCATGGGAATGGGATGGTTTTGGATATGGGAATGGTACTCTGCCTTTCGATGAAAATGATTCTGAAGAAATGCTTCTCTATGGACTTCTATCTGAGACCCGAGAAGAAGTGTCAGACAGAATTGAGGTGGAAGAGGTCGTTTCAGAATCCAAAGGAAAACCCATAAAGGATAAGGGCTTCAGAGGAGTGAGAAAGAGGCCGTGGGGGAAATTTGCGGCGGAGATAAGAGATTCAACGAGAAATGGCGTAAGAGTCTGGTTGGGAACGTTCGATAGCGCGGAAGCAGCAGCGTTGGCTTACGATCAAGCCGCTTTTGCAATGAGGGGATCGGCTGCGATCCTCAATTTTCCAGTGGAACGAGTGAGGGAATCACTGGAAGCGATGAACTGTAGAGGCTCCGACGGCGGCGGTTCTCCGGTGATGGCTCTGAAAAGAAAGCATTCAATGAGAAGGAAATACGGAGGGAAGAAAAACAACGAGAGAGAGGTGAAGATAGAAAATGTAGTGGTGTTTGAGGATTTAGGAGCAGATTATTTGGAAGAACTTTTGAGATCATCTGAGAATTAG | 642 | 47.04 | STLLNTPSMDSDFSPQSSFGSPDVCAWEWDGFGYGNGTLPFDENDSEEMLLYGLLSETREEVSDRIEVEEVVSESKGKPIKDKGFRGVRKRPWGKFAAEIRDSTRNGVRVWLGTFDSAEAAALAYDQAAFAMRGSAAILNFPVERVRESLEAMNCRGSDGGGSPVMALKRKHSMRRKYGGKKNNEREVKIENVVVFEDLGADYLEELLRSSEN | 213 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 9403953 | 9404594 | + | Bpe014607.1 | Bpe14g01247 | 115556 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe14g01247 | 213 | CDD | AP2 | 83 | 143 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe14g01247 | 213 | ProSiteProfiles | AP2/ERF domain profile. | 84 | 142 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe14g01247 | 213 | SUPERFAMILY | DNA-binding domain | 84 | 144 | IPR016177 | GO:0003677 | |
Bpe14g01247 | 213 | Gene3D | AP2/ERF domain | 84 | 144 | IPR036955 | GO:0003700|GO:0006355 | |
Bpe14g01247 | 213 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1B | 34 | 210 | - | - | |
Bpe14g01247 | 213 | SMART | rav1_2 | 84 | 148 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe14g01247 | 213 | Pfam | AP2 domain | 84 | 134 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe14g01247 | 213 | PANTHER | DNA-BINDING DOMAIN | 34 | 210 | IPR044808 | GO:0003700|GO:0009873 | |
Bpe14g01247 | 213 | PRINTS | Ethylene responsive element binding protein signature | 108 | 124 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe14g01247 | 213 | PRINTS | Ethylene responsive element binding protein signature | 85 | 96 | IPR001471 | GO:0003700|GO:0006355 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe05g00859 | Bpe-Chr5:21803648 | Bpe14g01247 | Bpe-Chr14:9403953 | 4.27E-58 | dispersed | |
Bpe09g00646 | Bpe-Chr9:15102714 | Bpe14g01247 | Bpe-Chr14:9403953 | 2.08E-21 | dispersed | |
Bpe10g00373 | Bpe-Chr10:11289704 | Bpe14g01247 | Bpe-Chr14:9403953 | 5.65E-50 | dispersed | |
Bpe14g01247 | Bpe-Chr14:9403953 | Bpe03g00368 | Bpe-Chr3:9705570 | 2.42E-32 | dispersed | |
Bpe11g01312 | Bpe-Chr11:9821697 | Bpe14g01247 | Bpe-Chr14:9403953 | 3.68E-61 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
22523 | PF00847 | AP2 | 2.70E-14 | CL0081 | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe14g01247 | K14516 | - | jre:109007057 | 262.307 |