Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe14g01257 CGGAAGAATGCTGTTAGTGCCAAACAAGCTCATAGCAGTCCATTGCAGTTCCGGAAGCTCGGTGATTCGGACCTTCTAATTAGCGAAATTACTCTCGGAACGATGACCTTTGGACAGCAAAATACGGAAAAAGAAGCTCACGAGTTGCTTAGTTATGCTTTCGATAATGGCATCAATATTCTGGATACTGCAGAGGCATATCCAGTTCCCATGAAAGAGGAGACTATGGGAAAAACTGACCTTTACATTGGTGGTTGGCTCAAGTCCCAACCCCGTGATAAGGTTATTTTGGCAACAAAAGTTTGTGGTTATTCAGAGCGTGCAACTTATTTGCGCGACAATGCCACTGTTTTGCGGGTTGATCGTGCAAATATAAGAGAAAGTGTGGAGAAAAGCCTCAAGCGGCTAAACACTGATTACATTGACTTACTGCAAATACATTGGCCAGATCGCTATGTGCCTCTGTTTGGTGAATTTTATTATGATCCTGCTAAATGGAGGCCAAGTGTGTCATTTGTTGAGCAACTGAAGGCATTTCAGGAACTCATCGATGAAGGAAAGGTACGCTATATTGGCATTTCGAATGAAACTTCCTATGGAGTTATGGAGTTTGTTCATGCAGCAAAGGTTGAAGGACTACCAAAGATCGTTAGTATCCAAAACAGTTACAGCCTTCTGGTTAGATGTCGTTATGAAGTTGATCTTGTTGAAGTTTGCCATCCAAATAATTGCAATATTGGGTTACTTGCGTACTCCCCACTTGGCGGTGGATCACTAAGCGGAAAATACTTGGATCCAAATTCTGAAGCTGCAAGAAAAGGAAGGCTCAATCTCTTTCCAGCCTACATGGATAGATACAACAAATCTATTGCTAGGGAAGCAACAATAGAATATCAACAGTTGGCCAAAAAACACGGCCTAACTTTAGTTCAGCTTGCGCTCGGATTTGTCAGAGACCGACCATTTATGACCAGTGCAATTATAGGTGCGACATCCATTGATCAGTTGAAAGAAGATATCGAAGCTTACGTGGGAACTGAGCGGCCTTTGCCGGGTGAAGTGTTGGATGATATTCTTAGTCTTTTTAAGAGGTACAAAGATCCTGCTATC 1110 42.52 RKNAVSAKQAHSSPLQFRKLGDSDLLISEITLGTMTFGQQNTEKEAHELLSYAFDNGINILDTAEAYPVPMKEETMGKTDLYIGGWLKSQPRDKVILATKVCGYSERATYLRDNATVLRVDRANIRESVEKSLKRLNTDYIDLLQIHWPDRYVPLFGEFYYDPAKWRPSVSFVEQLKAFQELIDEGKVRYIGISNETSYGVMEFVHAAKVEGLPKIVSIQNSYSLLVRCRYEVDLVEVCHPNNCNIGLLAYSPLGGGSLSGKYLDPNSEAARKGRLNLFPAYMDRYNKSIAREATIEYQQLAKKHGLTLVQLALGFVRDRPFMTSAIIGATSIDQLKEDIEAYVGTERPLPGEVLDDILSLFKRYKDPAI 370
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 9497953 9502202 + Bpe025549 Bpe14g01257 115566

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe14g01257 370 PANTHER NADH-SPECIFIC METHYLGLYOXAL REDUCTASE-RELATED 12 370 - -
Bpe14g01257 370 PANTHER - 12 370 - -
Bpe14g01257 370 Pfam Aldo/keto reductase family 29 343 IPR023210 -
Bpe14g01257 370 SUPERFAMILY NAD(P)-linked oxidoreductase 15 365 IPR036812 -
Bpe14g01257 370 Gene3D - 15 370 IPR036812 -
Bpe14g01257 370 PRINTS Aldo-keto reductase signature 179 196 IPR020471 GO:0016491
Bpe14g01257 370 PRINTS Aldo-keto reductase signature 131 149 IPR020471 GO:0016491
Bpe14g01257 370 CDD AKR_Tas-like 27 358 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe14g01257 - - - vvi:100259668 634.795
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe14g01257 Bpe-Chr14:9497953 Bpe14g01296 Bpe-Chr14:9902897 2.31E-27 dispersed
Bpe14g01257 Bpe-Chr14:9497953 Bpe03g00437 Bpe-Chr3:23207500 1.11E-80 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g715 . . . . . Bpe14g01257 . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone7ag0324 . . . . . . . . Bda13g00060 . . Bma02g00780 . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0011274 1 1 0 1 1 2 1 2 1 0 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 0 0 1 2 2 31
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe14g01257 Bpe_Chr14 FPKM 7.401807 7.300693 9.221016 8.7448 15.114731 14.348077 15.594674 3.921549 4.123734 5.195042