Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe14g01270 GTGATAACTGAGAATTGGACGAGCCAGCGTATTTTGATGTTTAGAAGTAAAGTTTGGAAGATGATTAAGTGTATCTGTCCAGGAAATCAACTAGAAGTTGATGAAATGGATCATTCATCTGAGTCTCTGCCAACGAGAGACTATTCTGCCAGCATTTTTTCGTCTCGAACTGTAGAGATGGAAACAAGGGCAGAGACTAGCAACATCGAAGAAGCCGAGTCGACTCTTCGTGAGAGTGATTATCTCAACTATGAGGAAGCGAGAGCTTTACTTGGAAGGCTTGAGTATCAAAAAGGAAACATAGAAGCTGCTCTCCAAGTGTTTGAAGGAATAGATATCACTGCAGTGACTCCTAGGATCAAAGTTGCTATCTGTAGAACATGTGAACAAAATAACAGAGGACATTCACAAGGTGATGCTGCTCCACTTATGTCCATGCATGCTGTTAGTTTATTACTTGAAGCTGTTTTTCTTAAATCTAAATCATTGCAAAGTCTAGGTCGATTCGCAGAGGCAGCTAAATCCTGCTTAGTTGTTTTGGATACCGTTCAATCTGCATTACCGGAAGGCTTGCCTGAAAACTTTACTATAGATTGTAAATTACAAGAGATTTTATTGAAGGCTGTCGAGTTGCTTCCCAAGTTATGGCAATCAGCGGGCTCTCTCCAAGGATGTATCTTGTCATACAGACGGGCTCTCCTCTATCGATGGAATCTCGATATTAAAACCAGTTCAAAGATAGAAAAAGAATTTGCTGTCTTTCTTCTTTACAGTGGTTTCGATACGAACCCTCCTAATCTTTGTTCACAGATGGAAAGCTCTTTTGTGCCCAAAAACAACATAGAAGAGGCAGTTCTTTTGTTATTAATTCTCATGAGAAAATATTTTCTTGGAAGAATTGGGTGGGACCCCTCCATCCTTGAGCATCTTACATTTGCTCTCTCTATTTCAGGAGAATTACTATCTTTGGCACATCAAGTTGAGCACTTGCTTCCAGGAATTATAGCAAGAAAAGAAAAATATCGCATAGTAGCTCTCTGTTTCTATGGCGAAGGTGAATGTATTGTTGCTTTGAATCTCTTAAAAAATTCTCTTAACTACAGAGAAATTCCTGACTGTACGCTGGAGTTATTGTTGGCTTCAAAAATATGTGCCGAGAATTCACTCTGTATTGACGAAGGGATCAGATTTACTCGACAAGCAATTTTGATGATGCATGGAAAATGCTCTCAAATGGTATCTGTGGCGACTTGCTTACTTGGAGTCTTACTATCAGCTGAATCGAGATCAGTTGTTTCTGATTCTGAGAGGAATTCAAAGCAGGCAGAAGCACTTGAGGCCTTACAAACCGCCGAAGAGACAATGAGTGAAAAAGACCCTTACATTGTGTTTTATCTTTGTCTTGAACTTGCTGATCAGAGAAAATTGGATTTGGCTCTATATTTTGCCAAGCAATTGCTTAAACTTGAGGCTGGGACAAGTATTAGAGGGTATAGTCTTTTGGCACGAATATTGTCAGCTCAAAAACGATTTGCAGATGCCGAGACTGTATTGAATGCCTCTCTTGTTCAGACCGAGAAGTGGGATCGAGTGGAATTATTAAGAATGAAAGCTAAACTCCAGATTGTGCAGGGCCAGGCGAAGAAGTTTATCGAGACGTGTACTCATCTTTTAGCCGCTCTTCAAGTTCAGACCAAAAATATTGATTTTATGAACAAGCTCACCAAGAAAAAGAGCAGTCATGACAGAAGACTGGAAATGGAAGTATGGCATGATTTAGCCAATATATACACAAGCTTATCTCAATGGCGTAATGCCGAAGTCTGTCTTTCAAAGTCTGAAGCCATCAATCCTTATTCTGCTTCAAGATGGCACTCCATGGGTAAAATTCTAGATCTTTTGCTGATTGAAATAGGTTTGTTATACGAGGCTAAAGGCCTTGACCAAGAGGCTCTGATAGCATACAAAAAGGCGTTGGATGTGGAAGCCACCCATGTCCCGAGTTTGATCTCTGCTGCCTGTGTGCTCAGACGGCATGGAAGTCAACGCCTGGGCATTGTGAGAAGCTTACTGGCCTATGCCATCAGACTCGACCGATCAAATCCCACTGCTTGGTATAATCTTGGGCTTGCTTACAAGTCTAGTGAGGGAGCATCGGCCATGGAGGTTGCCGAGTGCTTCCAGGCTGCCGTTCTCCTCGAAGAATCTGCACCAGTTGAACCCTTTAGATGA 2232 41.53 VITENWTSQRILMFRSKVWKMIKCICPGNQLEVDEMDHSSESLPTRDYSASIFSSRTVEMETRAETSNIEEAESTLRESDYLNYEEARALLGRLEYQKGNIEAALQVFEGIDITAVTPRIKVAICRTCEQNNRGHSQGDAAPLMSMHAVSLLLEAVFLKSKSLQSLGRFAEAAKSCLVVLDTVQSALPEGLPENFTIDCKLQEILLKAVELLPKLWQSAGSLQGCILSYRRALLYRWNLDIKTSSKIEKEFAVFLLYSGFDTNPPNLCSQMESSFVPKNNIEEAVLLLLILMRKYFLGRIGWDPSILEHLTFALSISGELLSLAHQVEHLLPGIIARKEKYRIVALCFYGEGECIVALNLLKNSLNYREIPDCTLELLLASKICAENSLCIDEGIRFTRQAILMMHGKCSQMVSVATCLLGVLLSAESRSVVSDSERNSKQAEALEALQTAEETMSEKDPYIVFYLCLELADQRKLDLALYFAKQLLKLEAGTSIRGYSLLARILSAQKRFADAETVLNASLVQTEKWDRVELLRMKAKLQIVQGQAKKFIETCTHLLAALQVQTKNIDFMNKLTKKKSSHDRRLEMEVWHDLANIYTSLSQWRNAEVCLSKSEAINPYSASRWHSMGKILDLLLIEIGLLYEAKGLDQEALIAYKKALDVEATHVPSLISAACVLRRHGSQRLGIVRSLLAYAIRLDRSNPTAWYNLGLAYKSSEGASAMEVAECFQAAVLLEESAPVEPFR 743
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 9612794 9615719 + Bpe014628.1 Bpe14g01270 115579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe14g01270 743 PANTHER PROTEIN NPG1 13 743 IPR043376 -
Bpe14g01270 743 SMART tpr_5 495 528 IPR019734 GO:0005515
Bpe14g01270 743 SMART tpr_5 632 665 IPR019734 GO:0005515
Bpe14g01270 743 SMART tpr_5 587 620 IPR019734 GO:0005515
Bpe14g01270 743 PANTHER OS10G0471400 PROTEIN 13 743 - -
Bpe14g01270 743 Gene3D Tetratricopeptide repeat domain 575 738 IPR011990 GO:0005515
Bpe14g01270 743 Pfam Tetratricopeptide repeat 636 663 IPR019734 GO:0005515
Bpe14g01270 743 Gene3D Tetratricopeptide repeat domain 392 574 IPR011990 GO:0005515
Bpe14g01270 743 SUPERFAMILY TPR-like 446 714 IPR011990 GO:0005515
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe13g00544 Bpe14g01270 CCT
Bpe13g00544 Bpe14g01270 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00455 Bpe-Chr2:2979603 Bpe14g01270 Bpe-Chr14:9612794 3.18E-180 dispersed
Bpe13g00544 Bpe-Chr13:12723507 Bpe14g01270 Bpe-Chr14:9612794 0 wgd
Bpe14g01270 Bpe-Chr14:9612794 Bpe03g00921 Bpe-Chr3:28917003 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe14g01270 K21843 - qsu:112015183 1005.36