Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe14g01288 ATGCTTTTTGATTCATTGCGCATTTTATCTATGACGGAGGATGAGAAATGCAAGGAACCGGGGTTCAGGCGGGCTCGAGGTGATTTGAGAGCCTCTTCCATTATGAGGAATCGAGGTCTGTGGCTGAATCGCGATAAACGAATTGTGGGTTCCATCCCCGGGGTCTACATTGGAGATTTGTTCCAGTTCAGGATGGAGTTATGCGTAGTTGGTTTGCATGGTCAGGCTCAAGCTGGAATCGACTACGTCCCAGCGAGTCATAGCTCTAATGGTGAGCCGATTGCCACAAGCATAATCGTTTCTGGTGGATACGAGGATGATGAGGACGCCGGAGACATGATAATTTACACTGGTCACGGAGGGCAAGACAAGTGTTCAAGGCAATGCACGAACCAGAAGCTAGAGGGTGGAAATCTGGCGCTGGAAAGAAGTATGTATTATGGGATTGAAGTGAGAGTTATTCGAGGGATCAAGTACGAGGGCAGTATAACAACTAAGGTTTATGTTTATGACGGTTTATATAAAATTGTAGATTGTTGGTTTGATGTGGGAAAGTCTGGATTTGGTGTTTTCAAGTATAAGCTTCTGCGTATTGATGGGCAAACTGAGATGGGTAGCTCCATTTTGAGGTTTGCCGAGACTCTTAGAAATAAACCTTTATCCTTAAGACCCTCTGGCTATTTCAGCCTGGATATTTCCATGAAGAAAGAGAACGTCCCGATTCTCCTTTTCAATGACATCGACAATGATCAGCATCCATTATATTTTGAATATACAGTCAAGCCTGTGTTTCCACTATTTGCATTTCACCAATCCGGAAGTGCCACTGGATGTAGTTGTGTTTCAGGGTGTGCTAATGATTGCTTTTGCGCTCTCAAAAATGGTGGAGAGCTGGCTTACGATCAAAACGGGTTTCTGGTAAGAGGGAAGCCTATAATTTTTGAATGTGGGCCAGATTGTCGGTGTCCCCCACAATGCCGAAATCGTGCTACTCAAAGAGGGTTGAAACACAGACTGGAAGTTTTTAGATCAAGGGAAACTGGTTGGGGCGTCAGGTCATTGGATGTGATACATGCTGGGGCTTTTATATGTGAATATACAGGAGTTTTTCTCACCAGGGATCAAGCCCAAGTTGTTTCCATGAATGGTGATACTTTAATTTATCCGAGTCATTTTTCAGATCGTTGGGCAGAATGGGGCGATATATCTCAAATTGATTCCAATTATGTTCGACCCTCATACCCGTCAGTTCCTCCATTGGATTTTGCAGTGGATGTGTCAAAAATGAGAAATGTTGCCTGTTATTTGAGCCACAGCACAACTCCAAATGTTATGTCACAGTTTGTGTTATATGATCATAACAATTTAATGTTCCCACATATTATGGTATTTGCAATGGAAAACATCCCGCCGATGAGAGAACTCAGCCTGGACTATGGTGTCCCTGATGAATGTGCCGGAAAACTTGCTATCTGTAACTGA 1482 43.52 MLFDSLRILSMTEDEKCKEPGFRRARGDLRASSIMRNRGLWLNRDKRIVGSIPGVYIGDLFQFRMELCVVGLHGQAQAGIDYVPASHSSNGEPIATSIIVSGGYEDDEDAGDMIIYTGHGGQDKCSRQCTNQKLEGGNLALERSMYYGIEVRVIRGIKYEGSITTKVYVYDGLYKIVDCWFDVGKSGFGVFKYKLLRIDGQTEMGSSILRFAETLRNKPLSLRPSGYFSLDISMKKENVPILLFNDIDNDQHPLYFEYTVKPVFPLFAFHQSGSATGCSCVSGCANDCFCALKNGGELAYDQNGFLVRGKPIIFECGPDCRCPPQCRNRATQRGLKHRLEVFRSRETGWGVRSLDVIHAGAFICEYTGVFLTRDQAQVVSMNGDTLIYPSHFSDRWAEWGDISQIDSNYVRPSYPSVPPLDFAVDVSKMRNVACYLSHSTTPNVMSQFVLYDHNNLMFPHIMVFAMENIPPMRELSLDYGVPDECAGKLAICN 493
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 9798260 9799741 - Bpe014645.1 Bpe14g01288 115597

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe14g01288 493 Gene3D - 47 205 IPR036987 -
Bpe14g01288 493 ProSiteProfiles SET domain profile. 337 480 IPR001214 GO:0005515
Bpe14g01288 493 ProSiteProfiles YDG domain profile. 50 197 IPR003105 -
Bpe14g01288 493 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE FAMILY MEMBER SUVH2-RELATED 1 490 - -
Bpe14g01288 493 SMART set_7 337 486 IPR001214 GO:0005515
Bpe14g01288 493 SUPERFAMILY SET domain 221 482 IPR046341 -
Bpe14g01288 493 Pfam Pre-SET motif 232 329 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Bpe14g01288 493 Gene3D SET domain 206 493 IPR046341 -
Bpe14g01288 493 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 1 490 - -
Bpe14g01288 493 ProSiteProfiles Pre-SET domain profile. 276 334 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Bpe14g01288 493 SMART preset_2 229 321 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Bpe14g01288 493 SUPERFAMILY PUA domain-like 31 211 IPR015947 -
Bpe14g01288 493 Pfam SAD/SRA domain 49 201 IPR003105 -
Bpe14g01288 493 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 493 IPR025794 GO:0016571
Bpe14g01288 493 SMART G9a_1 45 201 IPR003105 -
Bpe14g01288 493 Pfam SET domain 348 480 IPR001214 GO:0005515
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe14g01288 K11420 EHMT; [histone H3]-lysine9 N-trimethyltransferase EHMT [EC:2.1.1.355] - csv:101222210 876.315
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe05g00555 Bpe-Chr5:19692303 Bpe14g01288 Bpe-Chr14:9798260 6.96E-105 dispersed
Bpe07g00911 Bpe-Chr7:15082699 Bpe14g01288 Bpe-Chr14:9798260 1.11E-20 dispersed
Bpe09g00653 Bpe-Chr9:15157227 Bpe14g01288 Bpe-Chr14:9798260 4.01E-16 dispersed
Bpe11g01302 Bpe-Chr11:9739023 Bpe14g01288 Bpe-Chr14:9798260 3.65E-16 dispersed
Bpe12g00455 Bpe-Chr12:10277793 Bpe14g01288 Bpe-Chr14:9798260 2.73E-13 dispersed
Bpe14g01288 Bpe-Chr14:9798260 Bpe06g00240 Bpe-Chr6:12753405 1.53E-15 dispersed
Bpe14g01288 Bpe-Chr14:9798260 Bpe07g00196 Bpe-Chr7:1351753 5.78E-111 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g800 . . . . . Bpe14g01288 . . . . Cma06g01287 Cma14g01850 Car06g01105 Car14g01658 . . Cpe03g01550 . . . . . . . . . . . . . . Cone14ag0189 . Cone7ag0355 Cone4ag0368 Lsi05g01779 . . Cme06g00442 Blo02g00682 . . Bda13g00032 . . Bma02g00745 . . Cmo06g01292 Cmo14g01895 . . . . . . . . . . . . . Cla05g00401 Cam05g0437 Cec05g0443 Cco05g0442 Clacu05g0432 Cmu05g0413 Cre05g0474 . Csa03g01158 Chy06g00421 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007214 1 2 1 1 1 1 2 1 1 1 1 1 2 1 1 2 1 3 1 1 1 1 1 1 1 1 1 2 1 1 37
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22525 PF02182 SAD_SRA 1.90E-49 CL0178 Bpe TR
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe14g01288 Bpe_Chr14 FPKM 1.691083 1.900625 2.54273 2.699201 4.121303 3.840507 5.105441 0.284269 0.144546 0.13045