Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe14g01296 TCGCTTGCAATGACTATGCAGTACAAGAACTTGGGTAGATCCGGCTTGAAGGTTAGCCAGCTATCCTACGGAGCGTGGGTCAGCTTCGGCAACCAACTCGACGTTAAGGAGGCCAAGTCTCTCCTCCAGTGCTGCCGCGACCACGGGGTTAACTTCTTCGACAACGCCGAGGTCTACGCTAATGGCCGCGCGGAGGAGATCATGGGCCAGGCCATCCGCGAGCTTGGATGGAAGCGCTCTGACATTGTTGTCTCCACCAAGATCTTCTGGGGAGGCCAGGGTCCCAACGACAAGGGTTTATCTCGGAAGCACATCCTGGAGGGTACCAAGGCTTCGCTCAAGCGTCTGGACATGGATTATGTCGATTTGATTTACTGTCACCGCGCCGATTCATCCACGCCCATCGAGGAGACAGTGAGGGCTATGAACCACGTAATTGATAAAGGATGGGCTTTGTATTGGGGTACCAGTGAGTGGTCCGCCCAGCAGATCACCGAGGCTTGGGGAATCGCCGATCGTTTGGACATGGTGGGGCCAATCGTTGAGCAACCTGAATATAATATGCTGTCGAGGCACAAGGTTGAGTCTGAGTACCTCCCACTCTACACCAACTATGGCTTGGGTCTTACCACGTGGAGTCCCCTCGCATCTGGAGTGCTTACGGGAAAATACAACAAGGGAATCATACCAGCTGATAGTCGCTTTGCTTTGGAAAATTACAAAAATCTCGCAAATCGATCACTGGTTGAAGACGTGCTGAAAAAAGTTAATGGACTGAAGCCAATTGCAGAGGAGCTTGACGTGCCATTATCCCAACTTGCGATAGCATGGTGTGCAGCAAATCCTAATGTCTCATCCGTTATAACTGGTGCTACAAAAGAGTCTCAGATTCAGGAGAACATGAAAGCTGTCGAGGTAATTCCGTTACTGACTCCGGATGTGATGGAAAGGATTGAAGCTGTTGTTCAGACCAAGCCGAAGCGACCTGACTCGTATAGGTGA 1002 51.2 SLAMTMQYKNLGRSGLKVSQLSYGAWVSFGNQLDVKEAKSLLQCCRDHGVNFFDNAEVYANGRAEEIMGQAIRELGWKRSDIVVSTKIFWGGQGPNDKGLSRKHILEGTKASLKRLDMDYVDLIYCHRADSSTPIEETVRAMNHVIDKGWALYWGTSEWSAQQITEAWGIADRLDMVGPIVEQPEYNMLSRHKVESEYLPLYTNYGLGLTTWSPLASGVLTGKYNKGIIPADSRFALENYKNLANRSLVEDVLKKVNGLKPIAEELDVPLSQLAIAWCAANPNVSSVITGATKESQIQENMKAVEVIPLLTPDVMERIEAVVQTKPKRPDSYR 333
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 9902897 9904949 + Bpe014652.1 Bpe14g01296 115605

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe14g01296 333 Gene3D - 4 328 IPR036812 -
Bpe14g01296 333 Pfam Aldo/keto reductase family 21 321 IPR023210 -
Bpe14g01296 333 PANTHER HYPERKINETIC, ISOFORM M 5 333 IPR005399 -
Bpe14g01296 333 PANTHER POTASSIUM CHANNEL BETA SUBUNIT 1-RELATED 5 333 - -
Bpe14g01296 333 CDD AKR_AKR6C1_2 6 321 - -
Bpe14g01296 333 PRINTS KCNAB voltage-gated K+ channel beta subunit family signature 115 125 IPR005399 -
Bpe14g01296 333 PRINTS KCNAB voltage-gated K+ channel beta subunit family signature 166 185 IPR005399 -
Bpe14g01296 333 PRINTS KCNAB voltage-gated K+ channel beta subunit family signature 211 217 IPR005399 -
Bpe14g01296 333 PRINTS KCNAB voltage-gated K+ channel beta subunit family signature 263 275 IPR005399 -
Bpe14g01296 333 PRINTS KCNAB voltage-gated K+ channel beta subunit family signature 276 289 IPR005399 -
Bpe14g01296 333 SUPERFAMILY NAD(P)-linked oxidoreductase 6 323 IPR036812 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe14g01296 - - - rcu:8265635 633.254
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe12g00339 Bpe-Chr12:8459335 Bpe14g01296 Bpe-Chr14:9902897 2.62E-21 dispersed
Bpe12g00716 Bpe-Chr12:12700615 Bpe14g01296 Bpe-Chr14:9902897 2.03E-18 dispersed
Bpe13g00748 Bpe-Chr13:14019587 Bpe14g01296 Bpe-Chr14:9902897 5.57E-27 dispersed
Bpe14g01257 Bpe-Chr14:9497953 Bpe14g01296 Bpe-Chr14:9902897 2.31E-27 dispersed
Bpe14g01296 Bpe-Chr14:9902897 Bpe03g00437 Bpe-Chr3:23207500 9.88E-26 dispersed
Bpe14g01296 Bpe-Chr14:9902897 Bpe11g01335 Bpe-Chr11:9973039 1.23E-28 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g849 . . . . . Bpe14g01296 . . . . . . . Car14g01676 Sed02g1471 . Cpe03g01572 Bhi01g00060 Tan10g0556 Cmetu06g1480 . . . Lcy11g1747 . . . . . . . . . . Cone4ag0385 Lsi05g01815 . . Cme06g00408 . . . Bda13g00025 . . Bma02g01213 . . . Cmo14g01921 . . . . . . . . . . . . . Cla05g00370 Cam05g0403 Cec05g0408 Cco05g0408 Clacu05g0398 Cmu05g0383 Cre05g0445 . Csa03g01126 Chy06g00392 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0010593 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 1 2 1 1 1 2 1 1 1 1 1 1 2 1 32
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe14g01296 Bpe_Chr14 FPKM 48.1712 53.491043 34.186115 31.73208 24.034773 26.399975 24.213076 36.546982 36.702614 37.903126