Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe14g01345 ATGAGCTTCCAAGATTTTCAGAATCCGAATGCTGGTAGGGCAAAGCCTGCCGCCGCGCACAACCCATCGCAGGCCGTAGCCGCATCCGTATTTCAGATCAACACCGCTGTTTCCACCTATCGTCGTCTCGTTGATGCAATCGGTACCGTGAAGGATACTCCGGATCACCGGCAAAAACTGAAGGCAACCAGACAGAAAATTCTGCAACTCGTGAAAGATACTTCTTCCAAACTAAAATCATTGACTGAATCCAATCGCGATAGCAATGTTACACCAAACAAGAAAATCGAAGATGCTAAACTCGCCAAAGACTTCCAAACTGTTCTGCAAGAATTTCAGAAAGTTGAACAGCTTGCCTCAGAGCGTGAATCAACTTACGCACCTTCAGGTCCTCCATTGTCATCTTCATCCATCTCTAGCTCCAGCGAGCCCACCATGGATCAGGACAGCCAACCCTTCCTCATGCAGCAAAAAAGGCAGGAGTTGATCTTGCTGGACAATGAGATTGGTTTCAATGAAGCCGTAATCGATGAGAGGGAACAGGGCATCAGAGACATAGAGGAGCAAATTGGAGAAGCAAATGAAATATTCAGAGACCTTGCTGTTCTAGTTCATGAGCAGGGTGTGGTCATTGATGATATTCATTCAAACATCGACTCCTCTGCGGTTGCGACAACTCAAGCTCGAGTCCAGTTGGCCAAGGCTTCCAAAAGCACGAAAACCAGATCTTCATGGTGTTGGTGGGTGGTAGGAATCGTTATCATCGTTGTGGTGGTTGTTGTTCTTCTCGCCGTACTTTTGTAG 804 47.01 MSFQDFQNPNAGRAKPAAAHNPSQAVAASVFQINTAVSTYRRLVDAIGTVKDTPDHRQKLKATRQKILQLVKDTSSKLKSLTESNRDSNVTPNKKIEDAKLAKDFQTVLQEFQKVEQLASERESTYAPSGPPLSSSSISSSSEPTMDQDSQPFLMQQKRQELILLDNEIGFNEAVIDEREQGIRDIEEQIGEANEIFRDLAVLVHEQGVVIDDIHSNIDSSAVATTQARVQLAKASKSTKTRSSWCWWVVGIVIIVVVVVVLLAVLL 267
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 10726119 10727936 - Bpe014701.1 Bpe14g01345 115654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe14g01345 267 MobiDBLite consensus disorder prediction 119 149 - -
Bpe14g01345 267 Gene3D - 11 129 - -
Bpe14g01345 267 Gene3D - 171 266 - -
Bpe14g01345 267 MobiDBLite consensus disorder prediction 1 20 - -
Bpe14g01345 267 PANTHER SYNTAXIN 17 263 IPR045242 -
Bpe14g01345 267 SMART SynN_4 11 124 IPR006011 GO:0016020
Bpe14g01345 267 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 173 235 IPR000727 -
Bpe14g01345 267 CDD SNARE_Qa 176 234 - -
Bpe14g01345 267 SUPERFAMILY t-snare proteins 21 228 IPR010989 GO:0016020|GO:0016192
Bpe14g01345 267 Pfam SNARE domain 210 261 IPR000727 -
Bpe14g01345 267 PANTHER SYNTAXIN-22-LIKE 17 263 - -
Bpe14g01345 267 Pfam Syntaxin-like protein 27 126 IPR006011 GO:0016020
Bpe14g01345 267 SMART tSNARE_6 168 235 IPR000727 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe05g00520 Bpe-Chr5:19384275 Bpe14g01345 Bpe-Chr14:10726119 3.10E-82 dispersed
Bpe14g01345 Bpe-Chr14:10726119 Bpe07g00425 Bpe-Chr7:4783671 6.41E-12 dispersed
Bpe14g01345 Bpe-Chr14:10726119 Bpe07g00233 Bpe-Chr7:1658418 3.49E-85 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe14g01345 - K08488 fve:101306155 361.303