Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe14g01357 ATGAATTACTTTCCAGACGAAGTCTTGGAGCAAGTGTTCAATCACGTGACATCGCATCGGGACCGTAATGCGGTGTCGCTGGTGTGTAAGTTGTGGTTTACGGTTGAAAGATTTAGCAGGGAGAGAGTGTTCATCGGAAATTGCTACGCGATTAGTCCTGAGAGAGTAATCACTAGGTTTCCGAGGGTGAAGTCCCTGACCTTGAAGGGGAAACCTCATTTCGCCGACTTCAATCTGGTTCCGCAAGACTGGGGAGGCTTCGTTCATCCTTGGATCGAAGTTTTTGCTGAAAACCGGATGTCGTTGGAGGAGCTCAGGTTGAAGAGAATGGTGGTCTCGGATGAGAGCCTTGAGCTGATTTCCAGGTCGTTTCCCTATTTCAAGTCACTGGTTCTTTGCAGCTGCGAAGGGTTCTCCTCTAACGGCCTTGCTGCAATCGCTGGCAACTGTGGGTTTCTCAGAGAGCTGGACCTTCAAGAAAATGAAATACACGATCATAGTGGTTACTGGCTTAGCTGCTTTCCTGAGAGTTGCACATCACTTGTTTCCTTAAATTTCTCATGCCACAGAGGGGAAATAAATTTGGCAGCCCTTGAGAAACTTGTTGCGAGATGCCCCAATCTCAAATCGCTGAAATTGAATCGCTCTGTGCCTAGCACCACCTTACAGAAGTTACTATCATCCGCCCCTCAGTTACTGGATCTTGGAACGGGAACCTTCGTTCATGATCCACTCTCTGAATCCTTCGACAAACTCAAAACTAGCTTGCTGAAATGCAAGTCATTGAAGAGTTTGTCTGGTTTTTTGGATGTTTTTCCAATCTGCCTCCAATCCATTTACCCACTTTGCTCCGATCTGACATCTTTGAACCTCAGTTATGCTCCGGGGTTAAGGAGTAATCAGCTTGTAAATCTGATCCGCCACTGCAGAAAACTTCAGCGCTTATGGATTCTGGATCTAATAGGTGACAAAGGATTAGAAATAGTTGCCTCAACTTGCACAGAATTACAGGAACTGAGGGTCTTCCCATCCGACCTCCACGGGGTTGGAACAAGTGCTGTTACTGAAGTTGGCCTGGTTGCGATATCTTCAGGTTGCCGAAAGCTTCATTCTTTACTCTACTTTTGCCAACAGATGACCAATGCTGCTCTCATAGCAGTAGCAAGCAACTGTCCAAACTTCATTCGTTTCAGGCTATGCATCCTCGACCCGAAAAAACCAGACCCAGTGACCTCCCAGCCGCTGGACGAAGGTTTTGGTGCAATCGTTCAGGCCTGCAAAGGCCTCAGACGCCTCTCTCTCTCTGGCCTTCTCACAGACCAAGTTTTTTTTTACATCGGAATGTATGCCAAACAGCTTGAAATGCTTTCCATTGCATTTGCCGGTGAAAGCGACAAGGGCATGCTTTACGTGTTAAACGGGTGCAAGAAGCTTCGAAAGCTTGAAATCATGGACAGCCCCTTTGGCGATGCGGCACTTCTATCGGACGTGGCAAAGTACGAAACAATGCGATCCCTTTGGATGTCGTCTTGTACACTTACCTTTGGAGGCTGCAAAACCCTTGCTATGAAGATGCCGAGGCTTAACGTGGAGATCATTAATGAAGATGATCAGGCAGGGCTCATCGCCGATGAAAGGCAGAAGGTGGGGAAGATGTATCTTTACCGTACCCTGGTTGGCCCGAGACAAGATGCACCCCCATTCGTCCTGACTTTATAG 1719 47.59 MNYFPDEVLEQVFNHVTSHRDRNAVSLVCKLWFTVERFSRERVFIGNCYAISPERVITRFPRVKSLTLKGKPHFADFNLVPQDWGGFVHPWIEVFAENRMSLEELRLKRMVVSDESLELISRSFPYFKSLVLCSCEGFSSNGLAAIAGNCGFLRELDLQENEIHDHSGYWLSCFPESCTSLVSLNFSCHRGEINLAALEKLVARCPNLKSLKLNRSVPSTTLQKLLSSAPQLLDLGTGTFVHDPLSESFDKLKTSLLKCKSLKSLSGFLDVFPICLQSIYPLCSDLTSLNLSYAPGLRSNQLVNLIRHCRKLQRLWILDLIGDKGLEIVASTCTELQELRVFPSDLHGVGTSAVTEVGLVAISSGCRKLHSLLYFCQQMTNAALIAVASNCPNFIRFRLCILDPKKPDPVTSQPLDEGFGAIVQACKGLRRLSLSGLLTDQVFFYIGMYAKQLEMLSIAFAGESDKGMLYVLNGCKKLRKLEIMDSPFGDAALLSDVAKYETMRSLWMSSCTLTFGGCKTLAMKMPRLNVEIINEDDQAGLIADERQKVGKMYLYRTLVGPRQDAPPFVLTL 572
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 10862929 10864898 - Bpe014714.1 Bpe14g01357 115666

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe14g01357 572 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 2 569 - -
Bpe14g01357 572 Pfam Transport inhibitor response 1 protein domain 61 107 IPR041101 -
Bpe14g01357 572 Gene3D - 1 40 - -
Bpe14g01357 572 Pfam F-box 2 41 IPR041567 -
Bpe14g01357 572 Gene3D Ribonuclease Inhibitor 41 572 IPR032675 -
Bpe14g01357 572 SMART LRR_CC_2 333 365 IPR006553 -
Bpe14g01357 572 SMART LRR_CC_2 475 500 IPR006553 -
Bpe14g01357 572 SMART LRR_CC_2 283 308 IPR006553 -
Bpe14g01357 572 SMART LRR_CC_2 366 390 IPR006553 -
Bpe14g01357 572 SMART LRR_CC_2 309 332 IPR006553 -
Bpe14g01357 572 SMART LRR_CC_2 426 449 IPR006553 -
Bpe14g01357 572 SMART LRR_CC_2 205 228 IPR006553 -
Bpe14g01357 572 SMART LRR_CC_2 124 149 IPR006553 -
Bpe14g01357 572 SUPERFAMILY RNI-like 16 529 - -
Bpe14g01357 572 PANTHER PROTEIN AUXIN SIGNALING F-BOX 3 2 569 - -
Bpe14g01357 572 SMART fbox_2 4 45 IPR001810 GO:0005515
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe14g01357 - - - pvy:116111259 894.034
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g01812 Bpe-Chr4:23526197 Bpe14g01357 Bpe-Chr14:10862929 3.73E-26 dispersed
Bpe10g00449 Bpe-Chr10:11866852 Bpe14g01357 Bpe-Chr14:10862929 0 dispersed
Bpe11g01472 Bpe-Chr11:10948160 Bpe14g01357 Bpe-Chr14:10862929 0 dispersed
Bpe14g00475 Bpe-Chr14:4225195 Bpe14g01357 Bpe-Chr14:10862929 0 dispersed
Bpe14g01357 Bpe-Chr14:10862929 Bpe15g01142 Bpe-Chr15:20401556 1.67E-78 dispersed
Bpe14g01357 Bpe-Chr14:10862929 Bpe09g00556 Bpe-Chr9:14335545 0 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g405 . . Bda03g01248 . . Bpe14g01357 . . Cmo08g01154 Cmo17g00271 . . . . . . . . . . . . . . Cla06g00531 Cam06g0572 Cec06g0570 Cco06g0578 Clacu06g0560 Cmu06g0554 Cre06g1322 . Cone15ag0808 . . . . Chy11g01444 . . . . . . . . . Sed06g0516 . . Cma08g01183 . Car08g01059 Car17g00259 Cpe12g00236 Cpe17g00113 Bhi12g01780 Tan06g2588 Cmetu07g1857 Lac12g2348 . . . . . . . . . . . . . Cme11g01949
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004060 3 1 3 1 3 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 2 3 1 1 44
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe14g01357 Bpe_Chr14 FPKM 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0